RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TP73-AS1Q9UF72 201 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 LRP1BQ9NZR2 4599 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 HSPG2P98160 4391 aa2.82□□□□□ -1.96
ATXN3-220ENST00000553491 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 A0A0J9YXY3 114 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 BCE1O60756 84 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
ATXN3-220ENST00000553491 PRLHP81277 87 aa2.81□□□□□ -1.96
ATXN3-220ENST00000553491 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
ATXN3-220ENST00000553491 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-220ENST00000553491 RYR1P21817 5038 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 ETDCA0A1B0GVM5 59 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 H0Y9J4 135 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 Q6ZVH6 145 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 Q8NDZ9 215 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 SPANXB1Q9NS25 103 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-220ENST00000553491 ANAPC11Q9NYG5 84 aa2.8□□□□□ -1.96
ATXN3-220ENST00000553491 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
ATXN3-220ENST00000553491 FXYD2P54710 66 aa2.79□□□□□ -1.96
ATXN3-220ENST00000553491 LINC00308Q8TCZ7 52 aa2.79□□□□□ -1.96
ATXN3-220ENST00000553491 HIST1H4GQ99525 98 aa2.79□□□□□ -1.96
ATXN3-220ENST00000553491 SIGMAR1Q99720 223 aa2.79□□□□□ -1.96
ATXN3-220ENST00000553491 H3BMG7 143 aa2.78□□□□□ -1.96
ATXN3-220ENST00000553491 TSPAN13O95857 204 aa2.78□□□□□ -1.96
ATXN3-220ENST00000553491 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
ATXN3-220ENST00000553491 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
ATXN3-220ENST00000553491 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
ATXN3-220ENST00000553491 DNAH8Q96JB1 4490 aa2.78□□□□□ -1.97
ATXN3-220ENST00000553491 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 TIMM17BO60830 172 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 CRYGAP11844 174 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 SEC61GP60059 68 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 COPS9Q8WXC6 57 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
ATXN3-220ENST00000553491 TRAV23DV6A0A075B6W5 121 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 A0A1B0GV72 72 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 A8MU10 97 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 NDUFC2O95298 119 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 KCNQ1DNQ9H478 68 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
ATXN3-220ENST00000553491 A0A0B4J2C4 111 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 LOC107984156A0A0G2JMH3 177 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-220ENST00000553491 IFITM1P13164 125 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 KRTAP12-2P59991 146 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 ARL17AQ8IVW1 177 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 PPDPFLQ8WWR9 84 aa2.75□□□□□ -1.97
ATXN3-220ENST00000553491 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-220ENST00000553491 H7C2G1 150 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 K7ERJ3 54 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 COX7BP24311 80 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 TEN1Q86WV5 123 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 PRO1854Q9UHT4 67 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 FAT1Q14517 4588 aa2.74□□□□□ -1.97
ATXN3-220ENST00000553491 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 COX6CP09669 75 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 SCGB1C2P0DMR2 95 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 ETDBQ3ZM63 59 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 C9orf153Q5TBE3 101 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 C3orf22Q8N5N4 141 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
ATXN3-220ENST00000553491 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-220ENST00000553491 SPRR1AP35321 89 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 PSMB2P49721 201 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 ATXN8Q156A1 80 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 Q6Q795 121 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 Q6ZRX8 168 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 LINC00304Q8N9R0 145 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 ST20-AS1Q8NBB2 130 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 NAA38Q9BRA0 125 aaKnown RBP2.72□□□□□ -1.97
ATXN3-220ENST00000553491 Q9BRP9 147 aa2.72□□□□□ -1.97
ATXN3-220ENST00000553491 FAM240AA0A1B0GVK7 77 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 H3BT86 120 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 SLC25A20O43772 301 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 MOBPQ13875 183 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms