RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 C12orf57Q99622 126 aa7.08□□□□□ -1.28
ACTN1-207ENST00000553290 TCL1BO95988 128 aa7.07□□□□□ -1.28
ACTN1-207ENST00000553290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
ACTN1-207ENST00000553290 Q6JHZ5 121 aa7.06□□□□□ -1.28
ACTN1-207ENST00000553290 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
ACTN1-207ENST00000553290 PPDPFLQ8WWR9 84 aa7.05□□□□□ -1.28
ACTN1-207ENST00000553290 C14orf144Q96I85 54 aa7.05□□□□□ -1.28
ACTN1-207ENST00000553290 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
ACTN1-207ENST00000553290 SPATA45Q537H7 98 aa7.04□□□□□ -1.28
ACTN1-207ENST00000553290 PAM16Q9Y3D7 125 aa7.04□□□□□ -1.28
ACTN1-207ENST00000553290 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 CFC1P0CG37 223 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 OCIAD2Q56VL3 154 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 CLEC2BQ92478 149 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 RAB37Q96AX2 223 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 VAMP8Q9BV40 100 aa7.03□□□□□ -1.28
ACTN1-207ENST00000553290 SNCGO76070 127 aa7.02□□□□□ -1.29
ACTN1-207ENST00000553290 PCOTHQ58A44 107 aa7.02□□□□□ -1.29
ACTN1-207ENST00000553290 IGFL1Q6UW32 110 aa7.02□□□□□ -1.29
ACTN1-207ENST00000553290 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.29
ACTN1-207ENST00000553290 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
ACTN1-207ENST00000553290 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
ACTN1-207ENST00000553290 H0YGX0 51 aa7□□□□□ -1.29
ACTN1-207ENST00000553290 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
ACTN1-207ENST00000553290 C2orf91Q6ZV80 131 aa6.99□□□□□ -1.29
ACTN1-207ENST00000553290 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
ACTN1-207ENST00000553290 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
ACTN1-207ENST00000553290 A6NJY4 79 aa6.97□□□□□ -1.29
ACTN1-207ENST00000553290 CEND1Q8N111 149 aa6.97□□□□□ -1.29
ACTN1-207ENST00000553290 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
ACTN1-207ENST00000553290 H3BUT2 72 aa6.95□□□□□ -1.3
ACTN1-207ENST00000553290 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
ACTN1-207ENST00000553290 A0A1B0GX51 115 aa6.94□□□□□ -1.3
ACTN1-207ENST00000553290 GHRHP01286 108 aa6.94□□□□□ -1.3
ACTN1-207ENST00000553290 FAM218AQ96MZ4 157 aa6.94□□□□□ -1.3
ACTN1-207ENST00000553290 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
ACTN1-207ENST00000553290 LST1O00453 97 aa6.92□□□□□ -1.3
ACTN1-207ENST00000553290 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
ACTN1-207ENST00000553290 Q6Q795 121 aa6.92□□□□□ -1.3
ACTN1-207ENST00000553290 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
ACTN1-207ENST00000553290 FXYD2P54710 66 aa6.91□□□□□ -1.3
ACTN1-207ENST00000553290 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
ACTN1-207ENST00000553290 TEN1Q86WV5 123 aa6.91□□□□□ -1.3
ACTN1-207ENST00000553290 PYY3Q5JQD4 70 aa6.89□□□□□ -1.31
ACTN1-207ENST00000553290 H3BMG7 143 aa6.88□□□□□ -1.31
ACTN1-207ENST00000553290 TRIAP1O43715 76 aa6.88□□□□□ -1.31
ACTN1-207ENST00000553290 HSD52Q0P140 79 aa6.88□□□□□ -1.31
ACTN1-207ENST00000553290 FABP2P12104 132 aa6.87□□□□□ -1.31
ACTN1-207ENST00000553290 OBSCN-AS1Q96MR7 158 aa6.87□□□□□ -1.31
ACTN1-207ENST00000553290 H3BQ85 93 aa6.85□□□□□ -1.31
ACTN1-207ENST00000553290 DNAL4O96015 105 aa6.85□□□□□ -1.31
ACTN1-207ENST00000553290 MT1HP80294 61 aa6.85□□□□□ -1.31
ACTN1-207ENST00000553290 Q75L30 129 aa6.85□□□□□ -1.31
ACTN1-207ENST00000553290 A0A087WSZ3 146 aa6.84□□□□□ -1.31
ACTN1-207ENST00000553290 COX6CP09669 75 aa6.84□□□□□ -1.31
ACTN1-207ENST00000553290 PSMB2P49721 201 aa6.84□□□□□ -1.31
ACTN1-207ENST00000553290 ATP11AUNQ6ZP68 121 aa6.84□□□□□ -1.31
ACTN1-207ENST00000553290 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
ACTN1-207ENST00000553290 Q96NJ1 140 aa6.82□□□□□ -1.32
ACTN1-207ENST00000553290 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
ACTN1-207ENST00000553290 K7ERJ3 54 aa6.81□□□□□ -1.32
ACTN1-207ENST00000553290 LCE2DQ5TA82 110 aaPredicted RBP6.81□□□□□ -1.32
ACTN1-207ENST00000553290 A0A1W2PNM2 257 aa6.8□□□□□ -1.32
ACTN1-207ENST00000553290 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
ACTN1-207ENST00000553290 COX6B2Q6YFQ2 88 aa6.8□□□□□ -1.32
ACTN1-207ENST00000553290 ANKRD29Q8N6D5 301 aa6.8□□□□□ -1.32
ACTN1-207ENST00000553290 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
ACTN1-207ENST00000553290 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
ACTN1-207ENST00000553290 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
ACTN1-207ENST00000553290 A0A1B0GV72 72 aa6.75□□□□□ -1.33
ACTN1-207ENST00000553290 A8MUU9 505 aa6.75□□□□□ -1.33
ACTN1-207ENST00000553290 TRACP01848 142 aa6.75□□□□□ -1.33
ACTN1-207ENST00000553290 UBE2V1Q13404 147 aa6.75□□□□□ -1.33
ACTN1-207ENST00000553290 SIGMAR1Q99720 223 aa6.75□□□□□ -1.33
ACTN1-207ENST00000553290 M0R2T5 61 aa6.74□□□□□ -1.33
ACTN1-207ENST00000553290 SCGB1C2P0DMR2 95 aa6.74□□□□□ -1.33
ACTN1-207ENST00000553290 CCKP06307 115 aa6.73□□□□□ -1.33
ACTN1-207ENST00000553290 IGKV4-1P06312 121 aa6.73□□□□□ -1.33
ACTN1-207ENST00000553290 DSCR10P59022 87 aa6.73□□□□□ -1.33
ACTN1-207ENST00000553290 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
ACTN1-207ENST00000553290 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
ACTN1-207ENST00000553290 LINC00313P59037 77 aa6.72□□□□□ -1.33
ACTN1-207ENST00000553290 SMIM6P0DI80 62 aa6.71□□□□□ -1.34
ACTN1-207ENST00000553290 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
ACTN1-207ENST00000553290 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
ACTN1-207ENST00000553290 RBM3P98179 157 aaKnown RBP6.69□□□□□ -1.34
ACTN1-207ENST00000553290 PCP4L1A6NKN8 68 aa6.68□□□□□ -1.34
ACTN1-207ENST00000553290 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
ACTN1-207ENST00000553290 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
ACTN1-207ENST00000553290 VPS25Q9BRG1 176 aa6.67□□□□□ -1.34
ACTN1-207ENST00000553290 TRBV20-1A0A075B6N2 111 aa6.66□□□□□ -1.34
ACTN1-207ENST00000553290 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
ACTN1-207ENST00000553290 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
ACTN1-207ENST00000553290 M0R143 59 aa6.65□□□□□ -1.34
ACTN1-207ENST00000553290 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
ACTN1-207ENST00000553290 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
ACTN1-207ENST00000553290 C9JAW5 83 aa6.63□□□□□ -1.35
ACTN1-207ENST00000553290 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
ACTN1-207ENST00000553290 ATXN8Q156A1 80 aa6.62□□□□□ -1.35
ACTN1-207ENST00000553290 CRCT1Q9UGL9 99 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms