RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRBV7-4A0A0J9YYF1 115 aa11.99□□□□□ -0.49
RBFOX1-215ENST00000553186 Q6ZQT0 140 aa11.99□□□□□ -0.49
RBFOX1-215ENST00000553186 DSCR8Q96T75 97 aa11.98□□□□□ -0.49
RBFOX1-215ENST00000553186 HAMPP81172 84 aa11.97□□□□□ -0.49
RBFOX1-215ENST00000553186 C1orf137Q5JT78 98 aa11.97□□□□□ -0.49
RBFOX1-215ENST00000553186 SMIM29Q86T20 159 aa11.97□□□□□ -0.49
RBFOX1-215ENST00000553186 LRP1BQ9NZR2 4599 aa11.95□□□□□ -0.5
RBFOX1-215ENST00000553186 PDE6GP18545 87 aa11.94□□□□□ -0.5
RBFOX1-215ENST00000553186 TRBV7-7A0A0K0K1E9 115 aa11.93□□□□□ -0.5
RBFOX1-215ENST00000553186 SPRR1BP22528 89 aa11.92□□□□□ -0.5
RBFOX1-215ENST00000553186 CCDC179H3BU77 68 aa11.92□□□□□ -0.5
RBFOX1-215ENST00000553186 ZNF861PO60384 105 aa11.92□□□□□ -0.5
RBFOX1-215ENST00000553186 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
RBFOX1-215ENST00000553186 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
RBFOX1-215ENST00000553186 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
RBFOX1-215ENST00000553186 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-215ENST00000553186 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
RBFOX1-215ENST00000553186 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
RBFOX1-215ENST00000553186 RYR3Q15413 4870 aa11.84□□□□□ -0.51
RBFOX1-215ENST00000553186 IGLV8-61A0A075B6I0 122 aa11.84□□□□□ -0.51
RBFOX1-215ENST00000553186 F8WEM9 126 aa11.83□□□□□ -0.52
RBFOX1-215ENST00000553186 IMUPQ9GZP8 106 aa11.83□□□□□ -0.52
RBFOX1-215ENST00000553186 LINC00483Q53H64 154 aa11.82□□□□□ -0.52
RBFOX1-215ENST00000553186 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
RBFOX1-215ENST00000553186 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
RBFOX1-215ENST00000553186 A0A1W2PNM2 257 aa11.8□□□□□ -0.52
RBFOX1-215ENST00000553186 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-215ENST00000553186 IGFL1Q6UW32 110 aa11.78□□□□□ -0.52
RBFOX1-215ENST00000553186 A0A0G2JQZ4 141 aa11.77□□□□□ -0.53
RBFOX1-215ENST00000553186 Q8NBF4 154 aa11.77□□□□□ -0.53
RBFOX1-215ENST00000553186 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
RBFOX1-215ENST00000553186 UBL5Q9BZL1 73 aa11.74□□□□□ -0.53
RBFOX1-215ENST00000553186 APOBP04114 4563 aaKnown RBP11.74□□□□□ -0.53
RBFOX1-215ENST00000553186 Q6JHZ5 121 aa11.74□□□□□ -0.53
RBFOX1-215ENST00000553186 ANAPC11Q9NYG5 84 aa11.74□□□□□ -0.53
RBFOX1-215ENST00000553186 A0A1B0GW54 56 aa11.72□□□□□ -0.53
RBFOX1-215ENST00000553186 Q6ZVQ6 151 aa11.72□□□□□ -0.53
RBFOX1-215ENST00000553186 CRYGAP11844 174 aa11.71□□□□□ -0.54
RBFOX1-215ENST00000553186 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
RBFOX1-215ENST00000553186 IGKV3D-7A0A0C4DH55 119 aa11.67□□□□□ -0.54
RBFOX1-215ENST00000553186 SMR3BP02814 79 aaPredicted RBP11.66□□□□□ -0.54
RBFOX1-215ENST00000553186 HIST1H4AP62805 103 aaKnown RBP11.66□□□□□ -0.54
RBFOX1-215ENST00000553186 RPL37AP61513 92 aaKnown RBP11.65□□□□□ -0.54
RBFOX1-215ENST00000553186 C9orf153Q5TBE3 101 aa11.65□□□□□ -0.54
RBFOX1-215ENST00000553186 ATP5EP2Q5VTU8 51 aa11.64□□□□□ -0.55
RBFOX1-215ENST00000553186 MOBPQ13875 183 aa11.63□□□□□ -0.55
RBFOX1-215ENST00000553186 FAT1Q14517 4588 aa11.62□□□□□ -0.55
RBFOX1-215ENST00000553186 NREPQ16612 68 aa11.62□□□□□ -0.55
RBFOX1-215ENST00000553186 A0A087WSZ3 146 aa11.6□□□□□ -0.55
RBFOX1-215ENST00000553186 UQCRQO14949 82 aa11.6□□□□□ -0.55
RBFOX1-215ENST00000553186 KRTAP1-4P0C5Y4 121 aa11.59□□□□□ -0.55
RBFOX1-215ENST00000553186 KRTAP10-4P60372 401 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-215ENST00000553186 A0A087WVE0 104 aa11.57□□□□□ -0.56
RBFOX1-215ENST00000553186 CXCL6P80162 114 aa11.57□□□□□ -0.56
RBFOX1-215ENST00000553186 A0A087X002 238 aa11.57□□□□□ -0.56
RBFOX1-215ENST00000553186 COX7CP15954 63 aa11.57□□□□□ -0.56
RBFOX1-215ENST00000553186 SPINK6Q6UWN8 80 aa11.56□□□□□ -0.56
RBFOX1-215ENST00000553186 SMIM20Q8N5G0 67 aa11.56□□□□□ -0.56
RBFOX1-215ENST00000553186 ATOX1O00244 68 aa11.55□□□□□ -0.56
RBFOX1-215ENST00000553186 FAM229BQ4G0N7 80 aa11.55□□□□□ -0.56
RBFOX1-215ENST00000553186 KRTAP13-2Q52LG2 175 aa11.52□□□□□ -0.56
RBFOX1-215ENST00000553186 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
RBFOX1-215ENST00000553186 BPY2O14599 106 aa11.51□□□□□ -0.57
RBFOX1-215ENST00000553186 HRCT1Q6UXD1 115 aa11.5□□□□□ -0.57
RBFOX1-215ENST00000553186 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
RBFOX1-215ENST00000553186 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
RBFOX1-215ENST00000553186 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
RBFOX1-215ENST00000553186 HSPG2P98160 4391 aa11.47□□□□□ -0.57
RBFOX1-215ENST00000553186 Q8N9L7 120 aa11.45□□□□□ -0.58
RBFOX1-215ENST00000553186 LINC00472Q9H8W2 130 aa11.45□□□□□ -0.58
RBFOX1-215ENST00000553186 SERP2Q8N6R1 65 aa11.44□□□□□ -0.58
RBFOX1-215ENST00000553186 DSCR10P59022 87 aa11.44□□□□□ -0.58
RBFOX1-215ENST00000553186 CD164Q04900 197 aa11.43□□□□□ -0.58
RBFOX1-215ENST00000553186 DEFB116Q30KQ4 102 aa11.43□□□□□ -0.58
RBFOX1-215ENST00000553186 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
RBFOX1-215ENST00000553186 RYR1P21817 5038 aa11.4□□□□□ -0.58
RBFOX1-215ENST00000553186 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
RBFOX1-215ENST00000553186 FAM229AH3BQW9 127 aa11.39□□□□□ -0.59
RBFOX1-215ENST00000553186 Q96NJ1 140 aa11.39□□□□□ -0.59
RBFOX1-215ENST00000553186 K7EQZ3 153 aa11.36□□□□□ -0.59
RBFOX1-215ENST00000553186 PRR26Q8N8Z3 221 aa11.36□□□□□ -0.59
RBFOX1-215ENST00000553186 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
RBFOX1-215ENST00000553186 Q5VSD8 79 aa11.35□□□□□ -0.59
RBFOX1-215ENST00000553186 KIAA1109Q2LD37 5005 aa11.34□□□□□ -0.59
RBFOX1-215ENST00000553186 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
RBFOX1-215ENST00000553186 J3KT08 172 aa11.31□□□□□ -0.6
RBFOX1-215ENST00000553186 A8MWP4 228 aa11.3□□□□□ -0.6
RBFOX1-215ENST00000553186 Q5XG85 94 aa11.29□□□□□ -0.6
RBFOX1-215ENST00000553186 TMEM258P61165 79 aa11.28□□□□□ -0.6
RBFOX1-215ENST00000553186 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
RBFOX1-215ENST00000553186 C5orf47Q569G3 176 aa11.27□□□□□ -0.6
RBFOX1-215ENST00000553186 PKHD1L1Q86WI1 4243 aa11.27□□□□□ -0.6
RBFOX1-215ENST00000553186 PRR15Q8IV56 129 aa11.27□□□□□ -0.61
RBFOX1-215ENST00000553186 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-215ENST00000553186 SPINK1P00995 79 aa11.23□□□□□ -0.61
RBFOX1-215ENST00000553186 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
RBFOX1-215ENST00000553186 TRAV7A0A075B6U4 112 aa11.23□□□□□ -0.61
RBFOX1-215ENST00000553186 LINC00304Q8N9R0 145 aa11.22□□□□□ -0.61
RBFOX1-215ENST00000553186 Q8N1X5 172 aa11.21□□□□□ -0.62
RBFOX1-215ENST00000553186 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms