RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 A8MU10 97 aa4.83□□□□□ -1.64
CEP290-207ENST00000552810 TNP2Q05952 138 aa4.83□□□□□ -1.64
CEP290-207ENST00000552810 KCNQ1DNQ9H478 68 aa4.82□□□□□ -1.64
CEP290-207ENST00000552810 C10orf142B7Z368 130 aa4.82□□□□□ -1.64
CEP290-207ENST00000552810 ATRQ13535 2644 aa4.8□□□□□ -1.64
CEP290-207ENST00000552810 PRR34Q9NV39 138 aa4.79□□□□□ -1.64
CEP290-207ENST00000552810 GIG44P09565 113 aaPredicted RBP4.79□□□□□ -1.64
CEP290-207ENST00000552810 TNP1P09430 55 aa4.79□□□□□ -1.64
CEP290-207ENST00000552810 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
CEP290-207ENST00000552810 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
CEP290-207ENST00000552810 Q5W150 140 aa4.76□□□□□ -1.65
CEP290-207ENST00000552810 PLAC8Q9NZF1 115 aa4.75□□□□□ -1.65
CEP290-207ENST00000552810 SPRR1BP22528 89 aa4.75□□□□□ -1.65
CEP290-207ENST00000552810 MAST4O15021 2626 aa4.75□□□□□ -1.65
CEP290-207ENST00000552810 AKAP13Q12802 2813 aa4.75□□□□□ -1.65
CEP290-207ENST00000552810 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
CEP290-207ENST00000552810 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
CEP290-207ENST00000552810 A8MUU9 505 aa4.72□□□□□ -1.65
CEP290-207ENST00000552810 GCN1Q92616 2671 aaKnown RBP4.72□□□□□ -1.65
CEP290-207ENST00000552810 IGSF10Q6WRI0 2623 aa4.72□□□□□ -1.65
CEP290-207ENST00000552810 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
CEP290-207ENST00000552810 MMP24-AS1A0A0U1RRL7 71 aa4.7□□□□□ -1.66
CEP290-207ENST00000552810 NBEAL1Q6ZS30 2694 aa4.68□□□□□ -1.66
CEP290-207ENST00000552810 A0A096LNT2 108 aa4.68□□□□□ -1.66
CEP290-207ENST00000552810 CHD6Q8TD26 2715 aa4.66□□□□□ -1.66
CEP290-207ENST00000552810 COL6A5A8TX70 2615 aa4.63□□□□□ -1.67
CEP290-207ENST00000552810 PRRC2CQ9Y520 2896 aaKnown RBP4.61□□□□□ -1.67
CEP290-207ENST00000552810 A0A087X002 238 aa4.61□□□□□ -1.67
CEP290-207ENST00000552810 NOTCH2NLQ7Z3S9 236 aa4.61□□□□□ -1.67
CEP290-207ENST00000552810 PANO1I0J062 215 aa4.6□□□□□ -1.67
CEP290-207ENST00000552810 CENPEQ02224 2701 aa4.59□□□□□ -1.67
CEP290-207ENST00000552810 ITPR3Q14573 2671 aa4.56□□□□□ -1.68
CEP290-207ENST00000552810 KMT2BQ9UMN6 2715 aaPredicted RBP4.55□□□□□ -1.68
CEP290-207ENST00000552810 KRTAP26-1Q6PEX3 210 aa4.55□□□□□ -1.68
CEP290-207ENST00000552810 COL4A4P53420 1690 aaPredicted RBP4.54□□□□□ -1.68
CEP290-207ENST00000552810 A0A1B0GVY2 172 aa4.54□□□□□ -1.68
CEP290-207ENST00000552810 TRIOO75962 3097 aa4.53□□□□□ -1.68
CEP290-207ENST00000552810 A6NN06 94 aa4.5□□□□□ -1.69
CEP290-207ENST00000552810 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
CEP290-207ENST00000552810 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
CEP290-207ENST00000552810 ANKRD11Q6UB99 2663 aaPredicted RBP4.48□□□□□ -1.69
CEP290-207ENST00000552810 MUC22E2RYF6 1773 aaPredicted RBP4.47□□□□□ -1.69
CEP290-207ENST00000552810 COL4A2P08572 1712 aa4.47□□□□□ -1.69
CEP290-207ENST00000552810 KRTAP10-1P60331 282 aa4.46□□□□□ -1.7
CEP290-207ENST00000552810 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
CEP290-207ENST00000552810 LINC00472Q9H8W2 130 aa4.46□□□□□ -1.7
CEP290-207ENST00000552810 KRTAP4-16G5E9R7 235 aaPredicted RBP4.46□□□□□ -1.7
CEP290-207ENST00000552810 ITPR2Q14571 2701 aa4.44□□□□□ -1.7
CEP290-207ENST00000552810 ASB16-AS1Q495Z4 193 aa4.41□□□□□ -1.7
CEP290-207ENST00000552810 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.7
CEP290-207ENST00000552810 KRTAP10-10P60014 251 aa4.4□□□□□ -1.71
CEP290-207ENST00000552810 CEP350Q5VT06 3117 aa4.39□□□□□ -1.71
CEP290-207ENST00000552810 CHD9Q3L8U1 2897 aa4.36□□□□□ -1.71
CEP290-207ENST00000552810 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
CEP290-207ENST00000552810 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
CEP290-207ENST00000552810 SPRR1AP35321 89 aa4.32□□□□□ -1.72
CEP290-207ENST00000552810 TNRC18O15417 2968 aaPredicted RBP4.31□□□□□ -1.72
CEP290-207ENST00000552810 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
CEP290-207ENST00000552810 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
CEP290-207ENST00000552810 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
CEP290-207ENST00000552810 EP400Q96L91 3159 aa4.29□□□□□ -1.72
CEP290-207ENST00000552810 KRTAP1-1Q07627 177 aa4.29□□□□□ -1.72
CEP290-207ENST00000552810 Q6ZRN7 208 aaPredicted RBP4.28□□□□□ -1.72
CEP290-207ENST00000552810 KRTAP29-1A8MX34 341 aaPredicted RBP4.28□□□□□ -1.72
CEP290-207ENST00000552810 TEX15Q9BXT5 2789 aa4.28□□□□□ -1.72
CEP290-207ENST00000552810 UTP20O75691 2785 aaKnown RBP4.26□□□□□ -1.73
CEP290-207ENST00000552810 ZNF292O60281 2723 aa4.25□□□□□ -1.73
CEP290-207ENST00000552810 FLNAP21333 2647 aaKnown RBP4.25□□□□□ -1.73
CEP290-207ENST00000552810 C5orf42Q9H799 3197 aa4.24□□□□□ -1.73
CEP290-207ENST00000552810 CENPFP49454 3210 aa4.24□□□□□ -1.73
CEP290-207ENST00000552810 GOLGB1Q14789 3259 aaKnown RBP4.23□□□□□ -1.73
CEP290-207ENST00000552810 KRTAP10-6P60371 365 aaPredicted RBP4.23□□□□□ -1.73
CEP290-207ENST00000552810 KRTAP12-2P59991 146 aa4.23□□□□□ -1.73
CEP290-207ENST00000552810 UBR5O95071 2799 aaPredicted RBP4.21□□□□□ -1.74
CEP290-207ENST00000552810 REV3LO60673 3130 aa4.21□□□□□ -1.74
CEP290-207ENST00000552810 LCE6AA0A183 80 aa4.2□□□□□ -1.74
CEP290-207ENST00000552810 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
CEP290-207ENST00000552810 PCNTO95613 3336 aa4.18□□□□□ -1.74
CEP290-207ENST00000552810 FREM2Q5SZK8 3169 aa4.17□□□□□ -1.74
CEP290-207ENST00000552810 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
CEP290-207ENST00000552810 A0A0C4DFX4 3053 aa4.17□□□□□ -1.74
CEP290-207ENST00000552810 KRTAP13-2Q52LG2 175 aa4.17□□□□□ -1.74
CEP290-207ENST00000552810 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
CEP290-207ENST00000552810 CRYBG3Q68DQ2 2970 aa4.16□□□□□ -1.74
CEP290-207ENST00000552810 H0YAA0 97 aa4.15□□□□□ -1.74
CEP290-207ENST00000552810 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
CEP290-207ENST00000552810 DSPP15924 2871 aaKnown RBP4.13□□□□□ -1.75
CEP290-207ENST00000552810 UTRNP46939 3433 aa4.12□□□□□ -1.75
CEP290-207ENST00000552810 LAMA2P24043 3122 aaKnown RBP4.11□□□□□ -1.75
CEP290-207ENST00000552810 XP32Q5T750 250 aa4.08□□□□□ -1.76
CEP290-207ENST00000552810 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
CEP290-207ENST00000552810 DNAH12Q6ZR08 3092 aa4.05□□□□□ -1.76
CEP290-207ENST00000552810 APCP25054 2843 aa4.04□□□□□ -1.76
CEP290-207ENST00000552810 HIVEP1P15822 2718 aa4.04□□□□□ -1.76
CEP290-207ENST00000552810 HTTP42858 3142 aa4□□□□□ -1.77
CEP290-207ENST00000552810 TRANK1O15050 2925 aa3.99□□□□□ -1.77
CEP290-207ENST00000552810 SZT2Q5T011 3432 aa3.98□□□□□ -1.77
CEP290-207ENST00000552810 CHD7Q9P2D1 2997 aa3.98□□□□□ -1.77
CEP290-207ENST00000552810 FRYQ5TBA9 3013 aa3.97□□□□□ -1.77
CEP290-207ENST00000552810 TPRXLQ17RH7 258 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms