RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 KLK9Q2XQG4 91 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 DEFB109BQ30KR1 87 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 DEFB105AQ8NG35 78 aa0.98□□□□□ -2.25
NPAS3-212ENST00000552696 FN1P02751 2386 aaKnown RBP0.98□□□□□ -2.25
NPAS3-212ENST00000552696 IGF2RP11717 2491 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 SPTA1P02549 2419 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 ZDBF2Q9HCK1 2354 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 A8MTW9 85 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 DEFB110Q30KQ9 67 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 UNQ6190/PRO20217Q6UXQ8 127 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 WDR87Q6ZQQ6 2873 aa0.97□□□□□ -2.25
NPAS3-212ENST00000552696 HELZ2Q9BYK8 2649 aaKnown RBP0.97□□□□□ -2.25
NPAS3-212ENST00000552696 PKDREJQ9NTG1 2253 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 TENM1Q9UKZ4 2725 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 WNK1Q9H4A3 2382 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 H0YAA0 97 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 RPL37P61927 97 aaKnown RBP0.96□□□□□ -2.26
NPAS3-212ENST00000552696 KRTAP21-3Q3LHN1 58 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 Q6ZSA8 131 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 FAM208BQ5VWN6 2430 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 CEP250Q9BV73 2442 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 MGAQ8IWI9 3026 aa0.96□□□□□ -2.26
NPAS3-212ENST00000552696 RP1L1Q8IWN7 2480 aaPredicted RBP0.95□□□□□ -2.26
NPAS3-212ENST00000552696 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
NPAS3-212ENST00000552696 AKAP6Q13023 2319 aa0.95□□□□□ -2.26
NPAS3-212ENST00000552696 SPTBN2O15020 2390 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 ACACAQ13085 2346 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 MAP1BP46821 2468 aaKnown RBP0.94□□□□□ -2.26
NPAS3-212ENST00000552696 H3BUX3 64 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 DEFB130BP0DP73 79 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 DEFB130AP0DP74 79 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 HTN1P15515 57 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 PRLHP81277 87 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 CLPSL2Q6UWE3 100 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 DEFB108BQ8NET1 73 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 CACNA1HO95180 2353 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 JMJD1CQ15652 2540 aa0.94□□□□□ -2.26
NPAS3-212ENST00000552696 PTPRZ1P23471 2315 aaPredicted RBP0.94□□□□□ -2.26
NPAS3-212ENST00000552696 FLG2Q5D862 2391 aaPredicted RBP0.93□□□□□ -2.26
NPAS3-212ENST00000552696 NCOR1O75376 2440 aa0.93□□□□□ -2.26
NPAS3-212ENST00000552696 GVINP1Q7Z2Y8 2422 aa0.93□□□□□ -2.26
NPAS3-212ENST00000552696 LYNX1P0DP58 116 aa0.93□□□□□ -2.26
NPAS3-212ENST00000552696 DEFB123Q8N688 67 aa0.93□□□□□ -2.26
NPAS3-212ENST00000552696 NOP10Q9NPE3 64 aaKnown RBP0.93□□□□□ -2.26
NPAS3-212ENST00000552696 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
NPAS3-212ENST00000552696 PCNX1Q96RV3 2341 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 CD52P31358 61 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 SPRR1AP35321 89 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 Q9Y3F1 56 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 CHD7Q9P2D1 2997 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 CSPG4Q6UVK1 2322 aa0.92□□□□□ -2.26
NPAS3-212ENST00000552696 SPRR1BP22528 89 aa0.91□□□□□ -2.26
NPAS3-212ENST00000552696 APLNQ9ULZ1 77 aa0.91□□□□□ -2.26
NPAS3-212ENST00000552696 UBR5O95071 2799 aaPredicted RBP0.91□□□□□ -2.26
NPAS3-212ENST00000552696 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
NPAS3-212ENST00000552696 FAM186AA6NE01 2351 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 K7EIL1 84 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 SPINK1P00995 79 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 DEFB1P60022 68 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 C10orf95Q9H7T3 257 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 ROS1P08922 2347 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 SPTBN4Q9H254 2564 aa0.9□□□□□ -2.27
NPAS3-212ENST00000552696 APC2O95996 2303 aa0.89□□□□□ -2.27
NPAS3-212ENST00000552696 CREBBPQ92793 2442 aa0.89□□□□□ -2.27
NPAS3-212ENST00000552696 TRANK1O15050 2925 aa0.89□□□□□ -2.27
NPAS3-212ENST00000552696 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
NPAS3-212ENST00000552696 ABCA2Q9BZC7 2435 aa0.89□□□□□ -2.27
NPAS3-212ENST00000552696 REV3LO60673 3130 aa0.88□□□□□ -2.27
NPAS3-212ENST00000552696 CEP290O15078 2479 aa0.88□□□□□ -2.27
NPAS3-212ENST00000552696 C2CD3Q4AC94 2353 aa0.88□□□□□ -2.27
NPAS3-212ENST00000552696 LELP1Q5T871 98 aa0.88□□□□□ -2.27
NPAS3-212ENST00000552696 CHD6Q8TD26 2715 aa0.88□□□□□ -2.27
NPAS3-212ENST00000552696 SRRM2Q9UQ35 2752 aaKnown RBP0.88□□□□□ -2.27
NPAS3-212ENST00000552696 TNRC18O15417 2968 aaPredicted RBP0.87□□□□□ -2.27
NPAS3-212ENST00000552696 ASH1LQ9NR48 2969 aaKnown RBP0.87□□□□□ -2.27
NPAS3-212ENST00000552696 CEP350Q5VT06 3117 aa0.87□□□□□ -2.27
NPAS3-212ENST00000552696 ABCA12Q86UK0 2595 aa0.87□□□□□ -2.27
NPAS3-212ENST00000552696 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
NPAS3-212ENST00000552696 S4R3F8 94 aa0.87□□□□□ -2.27
NPAS3-212ENST00000552696 CELSR2Q9HCU4 2923 aa0.87□□□□□ -2.27
NPAS3-212ENST00000552696 MAP1AP78559 2803 aaPredicted RBP0.87□□□□□ -2.27
NPAS3-212ENST00000552696 SRCAPQ6ZRS2 3230 aa0.87□□□□□ -2.27
NPAS3-212ENST00000552696 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 PKD1L2Q7Z442 2459 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 A0A0D9SG42 100 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 DEFB136Q30KP8 78 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 Q5VSD8 79 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 OTOGQ6ZRI0 2925 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 NBEAQ8NFP9 2946 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 NAV2Q8IVL1 2488 aa0.86□□□□□ -2.27
NPAS3-212ENST00000552696 F8P00451 2351 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 ANKHD1Q8IWZ3 2542 aaKnown RBP0.85□□□□□ -2.27
NPAS3-212ENST00000552696 DEFB133Q30KQ1 61 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 CCDC168Q8NDH2 2452 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 TENM2Q9NT68 2774 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 CRYBG3Q68DQ2 2970 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 EP300Q09472 2414 aaPredicted RBP0.85□□□□□ -2.27
NPAS3-212ENST00000552696 HECTD1Q9ULT8 2610 aa0.85□□□□□ -2.27
NPAS3-212ENST00000552696 VWFP04275 2813 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms