RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RGS21Q2M5E4 152 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 KRTAP25-1Q3LHN0 102 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 ALKAL2Q6UX46 152 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 SOSTDC1Q6X4U4 206 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 ATP5L2Q7Z4Y8 100 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 PRELID3AQ96N28 172 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 SMIM7Q9BQ49 75 aa1.12□□□□□ -2.23
CPSF6-207ENST00000551516 GPR98Q8WXG9 6306 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 A0A0G2JQZ4 141 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 SPINK8P0C7L1 97 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 P0C880 135 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 TSPEAR-AS2P59090 65 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 CKS1BP61024 79 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 SMAGPQ0VAQ4 97 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 C10orf91Q5T1B1 145 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 MRPL54Q6P161 138 aaKnown RBP1.11□□□□□ -2.23
CPSF6-207ENST00000551516 SCGB1D4Q6XE38 83 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 Q6ZRX8 168 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 SMIM15Q7Z3B0 74 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 SPANXB1Q9NS25 103 aaPredicted RBP1.11□□□□□ -2.23
CPSF6-207ENST00000551516 NAT8Q9UHE5 227 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 ERG28Q9UKR5 140 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 CYSLTR1Q9Y271 337 aa1.11□□□□□ -2.23
CPSF6-207ENST00000551516 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 A0A1B0GU33 70 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 MT1BP07438 61 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 RAB5BP61020 215 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 SEC11AP67812 179 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 NXT2Q9NPJ8 142 aaKnown RBP1.1□□□□□ -2.23
CPSF6-207ENST00000551516 TOMM7Q9P0U1 55 aa1.1□□□□□ -2.23
CPSF6-207ENST00000551516 IGLV5-48A0A075B6I7 105 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 TRBV10-2A0A0K0K1G8 114 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 A0A1B0GVG6 124 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 F8W036 122 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 CEBPGP53567 150 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 RAB14P61106 215 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.23
CPSF6-207ENST00000551516 C9orf92A6NGG3 77 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 NDUFC2O95298 119 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 LINC00614P0C842 121 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 IFITM2Q01629 132 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 ADIRFQ15847 76 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 C18orf32Q8TCD1 76 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 SCGB3A1Q96QR1 104 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 C2orf88Q9BSF0 95 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 MAP1LC3AQ9H492 121 aa1.08□□□□□ -2.24
CPSF6-207ENST00000551516 TRAV9-1A0A075B6T8 112 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 TRAV12-1A0A0B4J245 112 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 M0R2T5 61 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 S100A8P05109 93 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 C4orf26Q17RF5 130 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 KRTAP19-8Q3LI54 63 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 BAGE3Q86Y29 109 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 BORCS7Q96B45 105 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 Q96NJ1 140 aa1.07□□□□□ -2.24
CPSF6-207ENST00000551516 A0A1W2PNM2 257 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 LINC01549A6NIU2 74 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 NCR3O14931 201 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 ZNF73O43830 326 aaPredicted RBP1.06□□□□□ -2.24
CPSF6-207ENST00000551516 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 LGALS3P17931 250 aaKnown RBP1.06□□□□□ -2.24
CPSF6-207ENST00000551516 ELOF1P60002 83 aaKnown RBP1.06□□□□□ -2.24
CPSF6-207ENST00000551516 PMCHL1Q16048 86 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
CPSF6-207ENST00000551516 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
CPSF6-207ENST00000551516 TMEM218A2RU14 115 aa1.05□□□□□ -2.24
CPSF6-207ENST00000551516 DDTP30046 118 aa1.05□□□□□ -2.24
CPSF6-207ENST00000551516 PEA15Q15121 130 aa1.05□□□□□ -2.24
CPSF6-207ENST00000551516 SFTA2Q6UW10 78 aa1.05□□□□□ -2.24
CPSF6-207ENST00000551516 OBSCN-AS1Q96MR7 158 aa1.05□□□□□ -2.24
CPSF6-207ENST00000551516 TRAV23DV6A0A075B6W5 121 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 TRBV7-6A0A0J9YX20 115 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 ETDCA0A1B0GVM5 59 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 H3BRM9 83 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 MT-ND4LP03901 98 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 G0S2P27469 103 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 LINC00158P58513 81 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 LINC00313P59037 77 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 HRCT1Q6UXD1 115 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 AKAP14Q86UN6 197 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 NDUFA12Q9UI09 145 aa1.04□□□□□ -2.24
CPSF6-207ENST00000551516 TRBV7-7A0A0K0K1E9 115 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 TEX49A0A1B0GTD5 131 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 C20orf202A1L168 122 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 H7C2G1 150 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 LEPROTO15243 131 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 HBDP02042 147 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 AKR1D1P51857 326 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 MEIG1Q5JSS6 88 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 CLLU1Q5K131 121 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 TMEM170BQ5T4T1 132 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 Q6Q795 121 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 COX6B2Q6YFQ2 88 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 KRTAP5-5Q701N2 237 aaPredicted RBP1.03□□□□□ -2.24
CPSF6-207ENST00000551516 LINC00308Q8TCZ7 52 aa1.03□□□□□ -2.24
CPSF6-207ENST00000551516 IFI27L1Q96BM0 104 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms