RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
PRPF40B-215ENST00000551418 SMIM29Q86T20 159 aa9.58□□□□□ -0.88
PRPF40B-215ENST00000551418 F8WEM9 126 aa9.56□□□□□ -0.88
PRPF40B-215ENST00000551418 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
PRPF40B-215ENST00000551418 SCGB1D1O95968 90 aa9.52□□□□□ -0.89
PRPF40B-215ENST00000551418 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
PRPF40B-215ENST00000551418 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
PRPF40B-215ENST00000551418 TCL1BO95988 128 aa9.51□□□□□ -0.89
PRPF40B-215ENST00000551418 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
PRPF40B-215ENST00000551418 M0R2T5 61 aa9.5□□□□□ -0.89
PRPF40B-215ENST00000551418 RPL37P61927 97 aaKnown RBP9.5□□□□□ -0.89
PRPF40B-215ENST00000551418 HIST1H4GQ99525 98 aa9.5□□□□□ -0.89
PRPF40B-215ENST00000551418 FLGP20930 4061 aaPredicted RBP9.5□□□□□ -0.89
PRPF40B-215ENST00000551418 COX8AP10176 69 aa9.48□□□□□ -0.89
PRPF40B-215ENST00000551418 Q6JHZ5 121 aa9.48□□□□□ -0.89
PRPF40B-215ENST00000551418 Q6ZQY7 126 aa9.48□□□□□ -0.89
PRPF40B-215ENST00000551418 DLEU1O43261 78 aa9.47□□□□□ -0.89
PRPF40B-215ENST00000551418 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
PRPF40B-215ENST00000551418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.46□□□□□ -0.9
PRPF40B-215ENST00000551418 SNCGO76070 127 aa9.45□□□□□ -0.9
PRPF40B-215ENST00000551418 COX6B2Q6YFQ2 88 aa9.44□□□□□ -0.9
PRPF40B-215ENST00000551418 CLEC2BQ92478 149 aa9.44□□□□□ -0.9
PRPF40B-215ENST00000551418 C12orf57Q99622 126 aa9.43□□□□□ -0.9
PRPF40B-215ENST00000551418 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
PRPF40B-215ENST00000551418 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
PRPF40B-215ENST00000551418 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
PRPF40B-215ENST00000551418 SNHG12Q9BXW3 62 aa9.39□□□□□ -0.91
PRPF40B-215ENST00000551418 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
PRPF40B-215ENST00000551418 A0A0B4J2C4 111 aa9.37□□□□□ -0.91
PRPF40B-215ENST00000551418 H0YGX0 51 aa9.37□□□□□ -0.91
PRPF40B-215ENST00000551418 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
PRPF40B-215ENST00000551418 GHRHP01286 108 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 CFC1P0CG37 223 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 SPATA45Q537H7 98 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 C14orf144Q96I85 54 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 VAMP8Q9BV40 100 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 PAM16Q9Y3D7 125 aa9.36□□□□□ -0.91
PRPF40B-215ENST00000551418 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
PRPF40B-215ENST00000551418 A6NJY4 79 aa9.34□□□□□ -0.91
PRPF40B-215ENST00000551418 SS18L2Q9UHA2 77 aa9.31□□□□□ -0.92
PRPF40B-215ENST00000551418 A0A1B0GX51 115 aa9.3□□□□□ -0.92
PRPF40B-215ENST00000551418 Q6Q795 121 aa9.3□□□□□ -0.92
PRPF40B-215ENST00000551418 LST1O00453 97 aa9.29□□□□□ -0.92
PRPF40B-215ENST00000551418 CEND1Q8N111 149 aa9.29□□□□□ -0.92
PRPF40B-215ENST00000551418 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
PRPF40B-215ENST00000551418 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
PRPF40B-215ENST00000551418 H3BUT2 72 aa9.27□□□□□ -0.93
PRPF40B-215ENST00000551418 PRO1854Q9UHT4 67 aa9.27□□□□□ -0.93
PRPF40B-215ENST00000551418 NDUFV3P56181 108 aaKnown RBP9.25□□□□□ -0.93
PRPF40B-215ENST00000551418 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
PRPF40B-215ENST00000551418 FAM218AQ96MZ4 157 aa9.23□□□□□ -0.93
PRPF40B-215ENST00000551418 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
PRPF40B-215ENST00000551418 Q75L30 129 aa9.22□□□□□ -0.93
PRPF40B-215ENST00000551418 H3BQ85 93 aa9.21□□□□□ -0.94
PRPF40B-215ENST00000551418 KRTAP9-8Q9BYQ0 159 aa9.21□□□□□ -0.94
PRPF40B-215ENST00000551418 H3BMG7 143 aa9.2□□□□□ -0.94
PRPF40B-215ENST00000551418 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
PRPF40B-215ENST00000551418 DNAL4O96015 105 aa9.19□□□□□ -0.94
PRPF40B-215ENST00000551418 FABP2P12104 132 aa9.19□□□□□ -0.94
PRPF40B-215ENST00000551418 FXYD2P54710 66 aa9.19□□□□□ -0.94
PRPF40B-215ENST00000551418 SSPOA2VEC9 5147 aa9.18□□□□□ -0.94
PRPF40B-215ENST00000551418 USH2AO75445 5202 aa9.18□□□□□ -0.94
PRPF40B-215ENST00000551418 HSD52Q0P140 79 aa9.18□□□□□ -0.94
PRPF40B-215ENST00000551418 TRIAP1O43715 76 aa9.17□□□□□ -0.94
PRPF40B-215ENST00000551418 Q96NJ1 140 aa9.17□□□□□ -0.94
PRPF40B-215ENST00000551418 A0A087WSZ3 146 aa9.16□□□□□ -0.94
PRPF40B-215ENST00000551418 COX6CP09669 75 aa9.16□□□□□ -0.94
PRPF40B-215ENST00000551418 KRTAP9-7A8MTY7 169 aa9.15□□□□□ -0.94
PRPF40B-215ENST00000551418 PSMB2P49721 201 aa9.14□□□□□ -0.95
PRPF40B-215ENST00000551418 ORMDL1Q9P0S3 153 aa9.14□□□□□ -0.95
PRPF40B-215ENST00000551418 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
PRPF40B-215ENST00000551418 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
PRPF40B-215ENST00000551418 ANKRD29Q8N6D5 301 aa9.1□□□□□ -0.95
PRPF40B-215ENST00000551418 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
PRPF40B-215ENST00000551418 TRBV7-4A0A0J9YYF1 115 aa9.09□□□□□ -0.95
PRPF40B-215ENST00000551418 UQCR10Q9UDW1 63 aa9.09□□□□□ -0.95
PRPF40B-215ENST00000551418 A8MUU9 505 aa9.08□□□□□ -0.96
PRPF40B-215ENST00000551418 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
PRPF40B-215ENST00000551418 K7ERJ3 54 aa9.06□□□□□ -0.96
PRPF40B-215ENST00000551418 SIGMAR1Q99720 223 aa9.06□□□□□ -0.96
PRPF40B-215ENST00000551418 KRTAP16-1A8MUX0 517 aa9.04□□□□□ -0.96
PRPF40B-215ENST00000551418 UBE2V1Q13404 147 aa9.04□□□□□ -0.96
PRPF40B-215ENST00000551418 MT2AP02795 61 aa9.03□□□□□ -0.96
PRPF40B-215ENST00000551418 DSCR10P59022 87 aa9.02□□□□□ -0.97
PRPF40B-215ENST00000551418 FCGBPQ9Y6R7 5405 aaPredicted RBP9.01□□□□□ -0.97
PRPF40B-215ENST00000551418 TRACP01848 142 aa9.01□□□□□ -0.97
PRPF40B-215ENST00000551418 CCKP06307 115 aa9□□□□□ -0.97
PRPF40B-215ENST00000551418 IGKV4-1P06312 121 aa9□□□□□ -0.97
PRPF40B-215ENST00000551418 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
PRPF40B-215ENST00000551418 LINC00313P59037 77 aa9□□□□□ -0.97
PRPF40B-215ENST00000551418 TRBV20-1A0A075B6N2 111 aa8.99□□□□□ -0.97
PRPF40B-215ENST00000551418 LCE2BO14633 110 aa8.99□□□□□ -0.97
PRPF40B-215ENST00000551418 A0A1B0GV72 72 aa8.98□□□□□ -0.97
PRPF40B-215ENST00000551418 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-215ENST00000551418 MT1FP04733 61 aa8.97□□□□□ -0.97
PRPF40B-215ENST00000551418 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
PRPF40B-215ENST00000551418 RBM3P98179 157 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-215ENST00000551418 DSCR8Q96T75 97 aa8.96□□□□□ -0.98
PRPF40B-215ENST00000551418 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
PRPF40B-215ENST00000551418 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms