RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 PPDPFLQ8WWR9 84 aa6.96□□□□□ -1.3
PRPF40B-213ENST00000551269 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
PRPF40B-213ENST00000551269 TRACP01848 142 aa6.95□□□□□ -1.3
PRPF40B-213ENST00000551269 FABP2P12104 132 aa6.95□□□□□ -1.3
PRPF40B-213ENST00000551269 MOBPQ13875 183 aa6.95□□□□□ -1.3
PRPF40B-213ENST00000551269 ORMDL1Q9P0S3 153 aa6.95□□□□□ -1.3
PRPF40B-213ENST00000551269 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
PRPF40B-213ENST00000551269 LINC01547P58512 204 aaPredicted RBP6.94□□□□□ -1.3
PRPF40B-213ENST00000551269 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
PRPF40B-213ENST00000551269 Q8NBF4 154 aa6.94□□□□□ -1.3
PRPF40B-213ENST00000551269 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-213ENST00000551269 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
PRPF40B-213ENST00000551269 H3BQ85 93 aa6.93□□□□□ -1.3
PRPF40B-213ENST00000551269 TCL1BO95988 128 aa6.93□□□□□ -1.3
PRPF40B-213ENST00000551269 Q8N377 158 aa6.93□□□□□ -1.3
PRPF40B-213ENST00000551269 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
PRPF40B-213ENST00000551269 SPCS1Q9Y6A9 102 aa6.9□□□□□ -1.3
PRPF40B-213ENST00000551269 TNXBP22105 4242 aa6.9□□□□□ -1.31
PRPF40B-213ENST00000551269 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
PRPF40B-213ENST00000551269 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PRPF40B-213ENST00000551269 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
PRPF40B-213ENST00000551269 LINC00304Q8N9R0 145 aa6.89□□□□□ -1.31
PRPF40B-213ENST00000551269 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
PRPF40B-213ENST00000551269 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
PRPF40B-213ENST00000551269 SMIM29Q86T20 159 aa6.88□□□□□ -1.31
PRPF40B-213ENST00000551269 C9JAW5 83 aa6.87□□□□□ -1.31
PRPF40B-213ENST00000551269 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
PRPF40B-213ENST00000551269 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-213ENST00000551269 H3BMG7 143 aa6.85□□□□□ -1.31
PRPF40B-213ENST00000551269 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
PRPF40B-213ENST00000551269 A0A1B0GV72 72 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 K7EP34 96 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 BAALC-AS2P0C853 105 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 Q6JHZ5 121 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 SPAG11AQ6PDA7 123 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.31
PRPF40B-213ENST00000551269 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
PRPF40B-213ENST00000551269 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
PRPF40B-213ENST00000551269 H3BT86 120 aa6.82□□□□□ -1.32
PRPF40B-213ENST00000551269 MTURNQ8N3F0 131 aa6.82□□□□□ -1.32
PRPF40B-213ENST00000551269 HRCT1Q6UXD1 115 aa6.81□□□□□ -1.32
PRPF40B-213ENST00000551269 SPINK1P00995 79 aa6.8□□□□□ -1.32
PRPF40B-213ENST00000551269 IGFL1Q6UW32 110 aa6.8□□□□□ -1.32
PRPF40B-213ENST00000551269 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
PRPF40B-213ENST00000551269 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
PRPF40B-213ENST00000551269 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-213ENST00000551269 CD164Q04900 197 aa6.78□□□□□ -1.32
PRPF40B-213ENST00000551269 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
PRPF40B-213ENST00000551269 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
PRPF40B-213ENST00000551269 RPS29P62273 56 aaKnown RBP6.77□□□□□ -1.33
PRPF40B-213ENST00000551269 TEN1Q86WV5 123 aa6.74□□□□□ -1.33
PRPF40B-213ENST00000551269 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
PRPF40B-213ENST00000551269 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
PRPF40B-213ENST00000551269 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
PRPF40B-213ENST00000551269 CCKP06307 115 aa6.73□□□□□ -1.33
PRPF40B-213ENST00000551269 C21orf62-AS1Q17RA5 79 aa6.72□□□□□ -1.33
PRPF40B-213ENST00000551269 Q6Q795 121 aa6.72□□□□□ -1.33
PRPF40B-213ENST00000551269 C14orf132Q9NPU4 83 aa6.72□□□□□ -1.33
PRPF40B-213ENST00000551269 SS18L2Q9UHA2 77 aa6.72□□□□□ -1.33
PRPF40B-213ENST00000551269 A0A1B0GV90 55 aa6.71□□□□□ -1.34
PRPF40B-213ENST00000551269 F8W1H4 67 aa6.71□□□□□ -1.34
PRPF40B-213ENST00000551269 PDE6GP18545 87 aa6.71□□□□□ -1.34
PRPF40B-213ENST00000551269 PRO0461Q9UI25 63 aa6.71□□□□□ -1.34
PRPF40B-213ENST00000551269 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
PRPF40B-213ENST00000551269 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
PRPF40B-213ENST00000551269 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
PRPF40B-213ENST00000551269 A0A087WSZ3 146 aa6.69□□□□□ -1.34
PRPF40B-213ENST00000551269 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
PRPF40B-213ENST00000551269 PRR4Q16378 134 aa6.69□□□□□ -1.34
PRPF40B-213ENST00000551269 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
PRPF40B-213ENST00000551269 Q5XG85 94 aa6.68□□□□□ -1.34
PRPF40B-213ENST00000551269 Q6ZQT0 140 aa6.68□□□□□ -1.34
PRPF40B-213ENST00000551269 FP248Q71RG6 208 aaPredicted RBP6.65□□□□□ -1.34
PRPF40B-213ENST00000551269 ETDBQ3ZM63 59 aa6.64□□□□□ -1.35
PRPF40B-213ENST00000551269 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
PRPF40B-213ENST00000551269 HERC1Q15751 4861 aa6.63□□□□□ -1.35
PRPF40B-213ENST00000551269 A0A1B0GW54 56 aa6.63□□□□□ -1.35
PRPF40B-213ENST00000551269 IGLV7-46A0A075B6I9 117 aa6.61□□□□□ -1.35
PRPF40B-213ENST00000551269 C1orf195Q5TG92 126 aa6.6□□□□□ -1.35
PRPF40B-213ENST00000551269 SIGMAR1Q99720 223 aa6.59□□□□□ -1.35
PRPF40B-213ENST00000551269 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
PRPF40B-213ENST00000551269 NREPQ16612 68 aa6.55□□□□□ -1.36
PRPF40B-213ENST00000551269 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
PRPF40B-213ENST00000551269 Q96NJ1 140 aa6.55□□□□□ -1.36
PRPF40B-213ENST00000551269 J3KT08 172 aa6.53□□□□□ -1.36
PRPF40B-213ENST00000551269 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
PRPF40B-213ENST00000551269 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
PRPF40B-213ENST00000551269 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
PRPF40B-213ENST00000551269 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
PRPF40B-213ENST00000551269 KRTAP13-3Q3SY46 172 aa6.51□□□□□ -1.37
PRPF40B-213ENST00000551269 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
PRPF40B-213ENST00000551269 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
PRPF40B-213ENST00000551269 Q6ZVQ6 151 aa6.5□□□□□ -1.37
PRPF40B-213ENST00000551269 LINC00846Q9NV44 126 aa6.49□□□□□ -1.37
PRPF40B-213ENST00000551269 J3QR89 54 aa6.48□□□□□ -1.37
PRPF40B-213ENST00000551269 BPY2O14599 106 aa6.48□□□□□ -1.37
PRPF40B-213ENST00000551269 NDUFB1O75438 58 aa6.48□□□□□ -1.37
PRPF40B-213ENST00000551269 ACYP1P07311 99 aa6.48□□□□□ -1.37
PRPF40B-213ENST00000551269 FAM240AA0A1B0GVK7 77 aa6.47□□□□□ -1.37
PRPF40B-213ENST00000551269 LPAP08519 4548 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms