RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 CRCT1Q9UGL9 99 aa11.38□□□□□ -0.59
PACS2-210ENST00000550790 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
PACS2-210ENST00000550790 SMIM11BQ8TCY0 68 aa11.37□□□□□ -0.59
PACS2-210ENST00000550790 PAM16Q9Y3D7 125 aa11.37□□□□□ -0.59
PACS2-210ENST00000550790 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
PACS2-210ENST00000550790 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
PACS2-210ENST00000550790 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
PACS2-210ENST00000550790 FLGP20930 4061 aaPredicted RBP11.33□□□□□ -0.6
PACS2-210ENST00000550790 CFC1BP0CG36 223 aa11.33□□□□□ -0.6
PACS2-210ENST00000550790 C14orf144Q96I85 54 aa11.33□□□□□ -0.6
PACS2-210ENST00000550790 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
PACS2-210ENST00000550790 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
PACS2-210ENST00000550790 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
PACS2-210ENST00000550790 KRTAP10-6P60371 365 aaPredicted RBP11.29□□□□□ -0.6
PACS2-210ENST00000550790 HIGD1BQ9P298 99 aa11.29□□□□□ -0.6
PACS2-210ENST00000550790 TCL1BO95988 128 aa11.28□□□□□ -0.6
PACS2-210ENST00000550790 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
PACS2-210ENST00000550790 VAMP3Q15836 100 aa11.24□□□□□ -0.61
PACS2-210ENST00000550790 hADV29S1A0JD25 119 aa11.21□□□□□ -0.61
PACS2-210ENST00000550790 Q6ZQY7 126 aa11.21□□□□□ -0.61
PACS2-210ENST00000550790 F8WEM9 126 aa11.2□□□□□ -0.62
PACS2-210ENST00000550790 Q6JHZ5 121 aa11.2□□□□□ -0.62
PACS2-210ENST00000550790 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
PACS2-210ENST00000550790 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
PACS2-210ENST00000550790 OCIAD2Q56VL3 154 aa11.18□□□□□ -0.62
PACS2-210ENST00000550790 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
PACS2-210ENST00000550790 LOC105371267A0A1B0GV96 52 aa11.17□□□□□ -0.62
PACS2-210ENST00000550790 CLEC2BQ92478 149 aa11.16□□□□□ -0.62
PACS2-210ENST00000550790 M0R2T5 61 aa11.14□□□□□ -0.63
PACS2-210ENST00000550790 CFC1P0CG37 223 aa11.13□□□□□ -0.63
PACS2-210ENST00000550790 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.13□□□□□ -0.63
PACS2-210ENST00000550790 COX6B2Q6YFQ2 88 aa11.13□□□□□ -0.63
PACS2-210ENST00000550790 C12orf57Q99622 126 aa11.13□□□□□ -0.63
PACS2-210ENST00000550790 SMIM6P0DI80 62 aa11.12□□□□□ -0.63
PACS2-210ENST00000550790 CEND1Q8N111 149 aa11.12□□□□□ -0.63
PACS2-210ENST00000550790 FXYD2P54710 66 aa11.11□□□□□ -0.63
PACS2-210ENST00000550790 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
PACS2-210ENST00000550790 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
PACS2-210ENST00000550790 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
PACS2-210ENST00000550790 Q75L30 129 aa11.09□□□□□ -0.63
PACS2-210ENST00000550790 OBSCN-AS1Q96MR7 158 aa11.09□□□□□ -0.63
PACS2-210ENST00000550790 HSD52Q0P140 79 aa11.07□□□□□ -0.64
PACS2-210ENST00000550790 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
PACS2-210ENST00000550790 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
PACS2-210ENST00000550790 ATP11AUNQ6ZP68 121 aa11.04□□□□□ -0.64
PACS2-210ENST00000550790 H3BUT2 72 aa11.03□□□□□ -0.64
PACS2-210ENST00000550790 LST1O00453 97 aa11.02□□□□□ -0.65
PACS2-210ENST00000550790 Q6Q795 121 aa11□□□□□ -0.65
PACS2-210ENST00000550790 TMEM238LA0A1B0GVL6 79 aa10.99□□□□□ -0.65
PACS2-210ENST00000550790 A6NJY4 79 aa10.99□□□□□ -0.65
PACS2-210ENST00000550790 RAB37Q96AX2 223 aa10.99□□□□□ -0.65
PACS2-210ENST00000550790 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
PACS2-210ENST00000550790 Q96NJ1 140 aa10.97□□□□□ -0.65
PACS2-210ENST00000550790 C20orf166-AS1Q96NR2 134 aa10.95□□□□□ -0.66
PACS2-210ENST00000550790 K7ERJ3 54 aa10.94□□□□□ -0.66
PACS2-210ENST00000550790 A8MUU9 505 aa10.93□□□□□ -0.66
PACS2-210ENST00000550790 TEN1Q86WV5 123 aa10.93□□□□□ -0.66
PACS2-210ENST00000550790 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
PACS2-210ENST00000550790 H0YGX0 51 aa10.92□□□□□ -0.66
PACS2-210ENST00000550790 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
PACS2-210ENST00000550790 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
PACS2-210ENST00000550790 TRIAP1O43715 76 aa10.89□□□□□ -0.67
PACS2-210ENST00000550790 SNCGO76070 127 aa10.87□□□□□ -0.67
PACS2-210ENST00000550790 A0A087WSZ3 146 aa10.86□□□□□ -0.67
PACS2-210ENST00000550790 KRTAP9-8Q9BYQ0 159 aa10.86□□□□□ -0.67
PACS2-210ENST00000550790 TSTD3H0UI37 97 aa10.84□□□□□ -0.67
PACS2-210ENST00000550790 USH2AO75445 5202 aa10.84□□□□□ -0.67
PACS2-210ENST00000550790 H3BMG7 143 aa10.83□□□□□ -0.68
PACS2-210ENST00000550790 A0A1B0GX51 115 aa10.82□□□□□ -0.68
PACS2-210ENST00000550790 A0A1W2PNM2 257 aa10.8□□□□□ -0.68
PACS2-210ENST00000550790 M0R143 59 aa10.8□□□□□ -0.68
PACS2-210ENST00000550790 DSCR10P59022 87 aa10.79□□□□□ -0.68
PACS2-210ENST00000550790 SSPOA2VEC9 5147 aa10.79□□□□□ -0.68
PACS2-210ENST00000550790 KRTAP16-1A8MUX0 517 aa10.78□□□□□ -0.68
PACS2-210ENST00000550790 GHRHP01286 108 aa10.77□□□□□ -0.69
PACS2-210ENST00000550790 FABP2P12104 132 aa10.77□□□□□ -0.69
PACS2-210ENST00000550790 TRBV20-1A0A075B6N2 111 aa10.75□□□□□ -0.69
PACS2-210ENST00000550790 PSMB2P49721 201 aa10.74□□□□□ -0.69
PACS2-210ENST00000550790 LINC00313P59037 77 aa10.72□□□□□ -0.69
PACS2-210ENST00000550790 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
PACS2-210ENST00000550790 COX6CP09669 75 aa10.69□□□□□ -0.7
PACS2-210ENST00000550790 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
PACS2-210ENST00000550790 NOTCH2NLQ7Z3S9 236 aa10.68□□□□□ -0.7
PACS2-210ENST00000550790 ANKRD29Q8N6D5 301 aa10.68□□□□□ -0.7
PACS2-210ENST00000550790 MPLKIPQ8TAP9 179 aa10.68□□□□□ -0.7
PACS2-210ENST00000550790 TRACP01848 142 aa10.67□□□□□ -0.7
PACS2-210ENST00000550790 IGKV4-1P06312 121 aa10.67□□□□□ -0.7
PACS2-210ENST00000550790 NAA38Q9BRA0 125 aaKnown RBP10.67□□□□□ -0.7
PACS2-210ENST00000550790 LINC00472Q9H8W2 130 aa10.66□□□□□ -0.7
PACS2-210ENST00000550790 MT2AP02795 61 aa10.64□□□□□ -0.71
PACS2-210ENST00000550790 H3BQ85 93 aa10.63□□□□□ -0.71
PACS2-210ENST00000550790 BATFQ16520 125 aa10.63□□□□□ -0.71
PACS2-210ENST00000550790 ORMDL1Q9P0S3 153 aa10.63□□□□□ -0.71
PACS2-210ENST00000550790 HRES1P13985 223 aa10.62□□□□□ -0.71
PACS2-210ENST00000550790 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
PACS2-210ENST00000550790 DEFB116Q30KQ4 102 aa10.61□□□□□ -0.71
PACS2-210ENST00000550790 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.6□□□□□ -0.71
PACS2-210ENST00000550790 TMEM256-PLSCR3K7ERE1 68 aa10.6□□□□□ -0.71
PACS2-210ENST00000550790 DNAL4O96015 105 aa10.6□□□□□ -0.71
PACS2-210ENST00000550790 SCGB1C2P0DMR2 95 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms