RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 A6NJY4 79 aa9.6□□□□□ -0.87
CHMP1A-208ENST00000550102 PYY3Q5JQD4 70 aa9.6□□□□□ -0.87
CHMP1A-208ENST00000550102 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.59□□□□□ -0.87
CHMP1A-208ENST00000550102 CEND1Q8N111 149 aa9.59□□□□□ -0.87
CHMP1A-208ENST00000550102 A0A0G2JQZ4 141 aa9.57□□□□□ -0.88
CHMP1A-208ENST00000550102 PPDPFLQ8WWR9 84 aa9.57□□□□□ -0.88
CHMP1A-208ENST00000550102 Q5XG85 94 aa9.56□□□□□ -0.88
CHMP1A-208ENST00000550102 SNCGO76070 127 aa9.54□□□□□ -0.88
CHMP1A-208ENST00000550102 Q6JHZ5 121 aa9.54□□□□□ -0.88
CHMP1A-208ENST00000550102 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
CHMP1A-208ENST00000550102 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 H0YGX0 51 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 FXYD2P54710 66 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 ASB16-AS1Q495Z4 193 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 CLEC2BQ92478 149 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
CHMP1A-208ENST00000550102 HSD52Q0P140 79 aa9.52□□□□□ -0.89
CHMP1A-208ENST00000550102 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
CHMP1A-208ENST00000550102 XP32Q5T750 250 aa9.51□□□□□ -0.89
CHMP1A-208ENST00000550102 TCL1BO95988 128 aa9.5□□□□□ -0.89
CHMP1A-208ENST00000550102 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
CHMP1A-208ENST00000550102 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
CHMP1A-208ENST00000550102 C1orf195Q5TG92 126 aa9.49□□□□□ -0.89
CHMP1A-208ENST00000550102 IGFL1Q6UW32 110 aa9.49□□□□□ -0.89
CHMP1A-208ENST00000550102 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
CHMP1A-208ENST00000550102 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
CHMP1A-208ENST00000550102 TRBV7-7A0A0K0K1E9 115 aa9.45□□□□□ -0.9
CHMP1A-208ENST00000550102 A0A1B0GX51 115 aa9.45□□□□□ -0.9
CHMP1A-208ENST00000550102 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
CHMP1A-208ENST00000550102 TRIAP1O43715 76 aa9.45□□□□□ -0.9
CHMP1A-208ENST00000550102 H3BUT2 72 aa9.44□□□□□ -0.9
CHMP1A-208ENST00000550102 K7ERJ3 54 aa9.43□□□□□ -0.9
CHMP1A-208ENST00000550102 GHRHP01286 108 aa9.43□□□□□ -0.9
CHMP1A-208ENST00000550102 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
CHMP1A-208ENST00000550102 PSMB2P49721 201 aa9.4□□□□□ -0.9
CHMP1A-208ENST00000550102 DNAL4O96015 105 aa9.38□□□□□ -0.91
CHMP1A-208ENST00000550102 COX6CP09669 75 aa9.37□□□□□ -0.91
CHMP1A-208ENST00000550102 FABP2P12104 132 aa9.37□□□□□ -0.91
CHMP1A-208ENST00000550102 KRTAP4-1Q9BYQ7 146 aa9.36□□□□□ -0.91
CHMP1A-208ENST00000550102 Q6Q795 121 aa9.35□□□□□ -0.91
CHMP1A-208ENST00000550102 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
CHMP1A-208ENST00000550102 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
CHMP1A-208ENST00000550102 H3BMG7 143 aa9.34□□□□□ -0.91
CHMP1A-208ENST00000550102 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
CHMP1A-208ENST00000550102 TEN1Q86WV5 123 aa9.33□□□□□ -0.92
CHMP1A-208ENST00000550102 H3BQ85 93 aa9.32□□□□□ -0.92
CHMP1A-208ENST00000550102 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
CHMP1A-208ENST00000550102 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
CHMP1A-208ENST00000550102 LST1O00453 97 aa9.31□□□□□ -0.92
CHMP1A-208ENST00000550102 SMIM6P0DI80 62 aa9.3□□□□□ -0.92
CHMP1A-208ENST00000550102 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
CHMP1A-208ENST00000550102 A0A087WSZ3 146 aa9.27□□□□□ -0.93
CHMP1A-208ENST00000550102 TMEM256-PLSCR3K7ERE1 68 aa9.27□□□□□ -0.93
CHMP1A-208ENST00000550102 M0R143 59 aa9.26□□□□□ -0.93
CHMP1A-208ENST00000550102 A0A1B0GV72 72 aa9.25□□□□□ -0.93
CHMP1A-208ENST00000550102 TRACP01848 142 aa9.25□□□□□ -0.93
CHMP1A-208ENST00000550102 SCGB1C2P0DMR2 95 aa9.25□□□□□ -0.93
CHMP1A-208ENST00000550102 A0A1W2PNM2 257 aa9.23□□□□□ -0.93
CHMP1A-208ENST00000550102 ANKRD29Q8N6D5 301 aa9.23□□□□□ -0.93
CHMP1A-208ENST00000550102 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
CHMP1A-208ENST00000550102 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
CHMP1A-208ENST00000550102 TRBV7-4A0A0J9YYF1 115 aa9.2□□□□□ -0.94
CHMP1A-208ENST00000550102 Q96NJ1 140 aa9.18□□□□□ -0.94
CHMP1A-208ENST00000550102 CCKP06307 115 aa9.17□□□□□ -0.94
CHMP1A-208ENST00000550102 SIGMAR1Q99720 223 aa9.17□□□□□ -0.94
CHMP1A-208ENST00000550102 TSTD3H0UI37 97 aa9.16□□□□□ -0.94
CHMP1A-208ENST00000550102 Q75L30 129 aa9.16□□□□□ -0.94
CHMP1A-208ENST00000550102 NAA38Q9BRA0 125 aaKnown RBP9.13□□□□□ -0.95
CHMP1A-208ENST00000550102 RBM3P98179 157 aaKnown RBP9.12□□□□□ -0.95
CHMP1A-208ENST00000550102 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
CHMP1A-208ENST00000550102 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
CHMP1A-208ENST00000550102 BAALC-AS2P0C853 105 aa9.11□□□□□ -0.95
CHMP1A-208ENST00000550102 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
CHMP1A-208ENST00000550102 LCE2CQ5TA81 110 aa9.11□□□□□ -0.95
CHMP1A-208ENST00000550102 ATP11AUNQ6ZP68 121 aa9.11□□□□□ -0.95
CHMP1A-208ENST00000550102 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
CHMP1A-208ENST00000550102 IGKV4-1P06312 121 aa9.1□□□□□ -0.95
CHMP1A-208ENST00000550102 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
CHMP1A-208ENST00000550102 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.95
CHMP1A-208ENST00000550102 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
CHMP1A-208ENST00000550102 LOC105371267A0A1B0GV96 52 aa9.07□□□□□ -0.96
CHMP1A-208ENST00000550102 DSCR10P59022 87 aa9.07□□□□□ -0.96
CHMP1A-208ENST00000550102 BATFQ16520 125 aa9.07□□□□□ -0.96
CHMP1A-208ENST00000550102 C9JAW5 83 aa9.06□□□□□ -0.96
CHMP1A-208ENST00000550102 A8MUU9 505 aa9.05□□□□□ -0.96
CHMP1A-208ENST00000550102 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
CHMP1A-208ENST00000550102 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
CHMP1A-208ENST00000550102 DEFB116Q30KQ4 102 aa9.03□□□□□ -0.96
CHMP1A-208ENST00000550102 TRBV20-1A0A075B6N2 111 aa9.02□□□□□ -0.97
CHMP1A-208ENST00000550102 JMJD7-PLA2G4BH0Y9G9 81 aa9.02□□□□□ -0.97
CHMP1A-208ENST00000550102 LINC00313P59037 77 aa9.02□□□□□ -0.97
CHMP1A-208ENST00000550102 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
CHMP1A-208ENST00000550102 MT1HP80294 61 aa9.01□□□□□ -0.97
CHMP1A-208ENST00000550102 LOC110117498A0A087WWA1 95 aa8.98□□□□□ -0.97
CHMP1A-208ENST00000550102 IGHV6-1A0A0B4J1U7 121 aa8.98□□□□□ -0.97
CHMP1A-208ENST00000550102 Q6ZQT0 140 aa8.98□□□□□ -0.97
CHMP1A-208ENST00000550102 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
CHMP1A-208ENST00000550102 J3KT08 172 aa8.96□□□□□ -0.98
CHMP1A-208ENST00000550102 PDE6GP18545 87 aa8.96□□□□□ -0.98
CHMP1A-208ENST00000550102 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms