RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 hADV29S1A0JD25 119 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 S100A7L2Q5SY68 101 aa2.86□□□□□ -1.95
SCAF11-212ENST00000549162 F8P00451 2351 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 IGHV3-73A0A0B4J1V6 119 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 A0A1B0GV90 55 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP10-1P60331 282 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 PSORS1C2Q9UIG4 136 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 AKAP6Q13023 2319 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 SPTBN1Q01082 2364 aaKnown RBP2.85□□□□□ -1.95
SCAF11-212ENST00000549162 NOTCH2Q04721 2471 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 IGKV3-7A0A075B6H7 116 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 SLC25A20O43772 301 aa2.85□□□□□ -1.95
SCAF11-212ENST00000549162 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 Q8N9P0 234 aaPredicted RBP2.84□□□□□ -1.95
SCAF11-212ENST00000549162 C20orf166-AS1Q96NR2 134 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 POLQO75417 2590 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
SCAF11-212ENST00000549162 LINC00313P59037 77 aa2.84□□□□□ -1.95
SCAF11-212ENST00000549162 XP32Q5T750 250 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 SPINK1P00995 79 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 XCL1P47992 114 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 PKDREJQ9NTG1 2253 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 TACC2O95359 2948 aa2.83□□□□□ -1.96
SCAF11-212ENST00000549162 IGKV3OR2-268A0A0C4DH90 116 aa2.82□□□□□ -1.96
SCAF11-212ENST00000549162 A8MUU9 505 aa2.82□□□□□ -1.96
SCAF11-212ENST00000549162 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
SCAF11-212ENST00000549162 SNCGO76070 127 aa2.82□□□□□ -1.96
SCAF11-212ENST00000549162 LINC00643Q86TS7 51 aa2.81□□□□□ -1.96
SCAF11-212ENST00000549162 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
SCAF11-212ENST00000549162 C8orf17Q9NRJ1 99 aa2.81□□□□□ -1.96
SCAF11-212ENST00000549162 CLPSL2Q6UWE3 100 aa2.81□□□□□ -1.96
SCAF11-212ENST00000549162 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
SCAF11-212ENST00000549162 PANO1I0J062 215 aa2.81□□□□□ -1.96
SCAF11-212ENST00000549162 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 CIRBP-AS1Q8TBR5 109 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 A0A087WYN8 130 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 LRRK2Q5S007 2527 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 IGKV2-30P06310 120 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 MOBPQ13875 183 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 CAMK2N1Q7Z7J9 78 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 VPS25Q9BRG1 176 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 MTORP42345 2549 aa2.8□□□□□ -1.96
SCAF11-212ENST00000549162 PSCAO43653 123 aa2.79□□□□□ -1.96
SCAF11-212ENST00000549162 C9orf116Q5BN46 136 aaPredicted RBP2.79□□□□□ -1.96
SCAF11-212ENST00000549162 WFDC13Q8IUB5 93 aa2.79□□□□□ -1.96
SCAF11-212ENST00000549162 TMEM254Q8TBM7 123 aa2.79□□□□□ -1.96
SCAF11-212ENST00000549162 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
SCAF11-212ENST00000549162 SPCS1Q9Y6A9 102 aa2.79□□□□□ -1.96
SCAF11-212ENST00000549162 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
SCAF11-212ENST00000549162 A8MUN3 132 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 SCXQ7RTU7 201 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 LRP2P98164 4655 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 WNK2Q9Y3S1 2297 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 FAM168BA1KXE4 195 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 Q1RN00 199 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 UBE2DNLQ8IWF7 75 aa2.78□□□□□ -1.96
SCAF11-212ENST00000549162 DEFB4AO15263 64 aa2.77□□□□□ -1.97
SCAF11-212ENST00000549162 LINC00158P58513 81 aa2.77□□□□□ -1.97
SCAF11-212ENST00000549162 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
SCAF11-212ENST00000549162 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
SCAF11-212ENST00000549162 DEFB104AQ8WTQ1 72 aa2.76□□□□□ -1.97
SCAF11-212ENST00000549162 TTTY13Q9BZ97 58 aa2.76□□□□□ -1.97
SCAF11-212ENST00000549162 A0A1B0GVX0 72 aa2.76□□□□□ -1.97
SCAF11-212ENST00000549162 UBE2AP49459 152 aa2.76□□□□□ -1.97
SCAF11-212ENST00000549162 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
SCAF11-212ENST00000549162 TP53AIP1Q9HCN2 124 aa2.75□□□□□ -1.97
SCAF11-212ENST00000549162 HINT1P49773 126 aaPredicted RBP2.75□□□□□ -1.97
SCAF11-212ENST00000549162 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
SCAF11-212ENST00000549162 HRCT1Q6UXD1 115 aa2.75□□□□□ -1.97
SCAF11-212ENST00000549162 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
SCAF11-212ENST00000549162 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
SCAF11-212ENST00000549162 A8MWP4 228 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 CENPEQ02224 2701 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
SCAF11-212ENST00000549162 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 KIAA1109Q2LD37 5005 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 BAALC-AS2P0C853 105 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 ADM2Q7Z4H4 148 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 NBASA2RRP1 2371 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 COL6A5A8TX70 2615 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 H3BUT2 72 aa2.74□□□□□ -1.97
SCAF11-212ENST00000549162 J3QR89 54 aa2.73□□□□□ -1.97
SCAF11-212ENST00000549162 RBM3P98179 157 aaKnown RBP2.73□□□□□ -1.97
SCAF11-212ENST00000549162 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
SCAF11-212ENST00000549162 H0YAA0 97 aa2.73□□□□□ -1.97
SCAF11-212ENST00000549162 K7ERU9 68 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 XAGE1AQ9HD64 81 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 K7ERJ3 54 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 DSCR10P59022 87 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 KLKP1Q107X0 134 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 CYP4F30PQ9H0H9 118 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 PKD1L1Q8TDX9 2849 aa2.72□□□□□ -1.97
SCAF11-212ENST00000549162 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms