RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 GUCA1AP43080 201 aaPredicted RBP-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 DNAJB13P59910 316 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 SNRPGP62308 76 aaKnown RBP-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 BASP1P80723 227 aaKnown RBP-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 EMX2Q04743 252 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 FAM74A4Q5TZK3 123 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 Q6ZUT4 128 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 OR8I2Q8N0Y5 310 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 STX19Q8N4C7 294 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 PRELID3AQ96N28 172 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 KCNQ1DNQ9H478 68 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TPT1P8Q9HAU6 139 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 CDC42SE2Q9NRR3 84 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TMEM242Q9NWH2 141 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TAS2R8Q9NYW2 309 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 MED31Q9Y3C7 131 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 R4GMQ9 66 aa-0.18□□□□□ -2.44
CCDC38-206ENST00000548771 TRAV13-1A0A0B4J241 112 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 LINC01546A6NGU7 62 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 MCRIP1C9JLW8 97 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 H3BVH4 76 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 NMBP08949 121 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 ARMS2P0C7Q2 107 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 GTF2A1P52655 376 aaPredicted RBP-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 NMSQ5H8A3 153 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 ZNF818PQ6ZRF7 136 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 AKAP14Q86UN6 197 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 SNX29P2Q8IUI4 249 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 PP6455Q8WZ26 134 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 RPL39LQ96EH5 51 aaKnown RBP-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 FAM167A-AS1Q96KT0 104 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 TRGV9Q99603 122 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 CCDC32Q9BV29 185 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 CNFNQ9BYD5 112 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 SCN3BQ9NY72 215 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 FKBP11Q9NYL4 201 aa-0.19□□□□□ -2.44
CCDC38-206ENST00000548771 TRAV30A0A087WSZ9 112 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 TRAV21A0A0B4J279 112 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 A0A0G2JND7 137 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 CRYM-AS1A6NIL9 109 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 SNRPGP15A8MWD9 76 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 F8VRH5 84 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 H3BUT2 72 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 K7EP34 96 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 NCR2O95944 276 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 APOC1P02654 83 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 IAPPP10997 89 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 RPL7P18124 248 aaKnown RBP-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 S100A3P33764 101 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 SDC2P34741 201 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 AKR1D1P51857 326 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 POLR2JP52435 117 aaKnown RBP-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 S100A10P60903 97 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 RPL39P62891 51 aaKnown RBP-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 HSD17B12Q53GQ0 312 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 CYP2G1PQ6ZSU1 146 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 LINC00305Q7Z4B0 112 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 DEFB105AQ8NG35 78 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 MGST2Q99735 147 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 FXYD6Q9H0Q3 95 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 PRO1933Q9H354 126 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 BIN3Q9NQY0 253 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 CMC2Q9NRP2 79 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 ABRACLQ9P1F3 81 aa-0.2□□□□□ -2.44
CCDC38-206ENST00000548771 ETDCA0A1B0GVM5 59 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 TRDV1A0A1B0GX56 115 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 GABARAPH6UMI1 98 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 CORTO00230 105 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 SMIM24O75264 130 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 MGPP08493 103 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 TNP1P09430 55 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 SLC25A4P12235 298 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 COX4I1P13073 169 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 POLR2KP53803 58 aaKnown RBP-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 PKIAP61925 76 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 TMEM78Q5T7P6 136 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 MIC13Q5XKP0 118 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 CTAGE3PQ8IX95 158 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 Q8IZM0 81 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 AP3S1Q92572 193 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 PPP3R2Q96LZ3 170 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 TOMM7Q9P0U1 55 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 COPZ2Q9P299 210 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 CDKN2A-AS1Q9UH64 79 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 GNG8Q9UK08 70 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 HIGD1AQ9Y241 93 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 ARL2-SNX15V9GYD0 113 aa-0.21□□□□□ -2.44
CCDC38-206ENST00000548771 A0A087WXM4 84 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 MMP24-AS1A0A0U1RRL7 71 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 TEX49A0A1B0GTD5 131 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 LOC100130705A0A1B0GUX0 176 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 J3QLW9 94 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 EDF1O60869 148 aaKnown RBP-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 SNAPC5O75971 98 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 MT-ATP8P03928 68 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 IL5P05113 134 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 NBEAP1P0C6P0 100 aa-0.22□□□□□ -2.44
CCDC38-206ENST00000548771 SPINK8P0C7L1 97 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms