RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 Q6ZQY7 126 aa8.45□□□□□ -1.06
RAPGEF3-217ENST00000548434 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
RAPGEF3-217ENST00000548434 IGFL1Q6UW32 110 aa8.44□□□□□ -1.06
RAPGEF3-217ENST00000548434 hADV29S1A0JD25 119 aa8.43□□□□□ -1.06
RAPGEF3-217ENST00000548434 TCL1BO95988 128 aa8.43□□□□□ -1.06
RAPGEF3-217ENST00000548434 TRBV7-7A0A0K0K1E9 115 aa8.42□□□□□ -1.06
RAPGEF3-217ENST00000548434 VAMP3Q15836 100 aa8.42□□□□□ -1.06
RAPGEF3-217ENST00000548434 OCIAD2Q56VL3 154 aa8.42□□□□□ -1.06
RAPGEF3-217ENST00000548434 Q6JHZ5 121 aa8.41□□□□□ -1.06
RAPGEF3-217ENST00000548434 CLEC2BQ92478 149 aa8.4□□□□□ -1.06
RAPGEF3-217ENST00000548434 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.39□□□□□ -1.07
RAPGEF3-217ENST00000548434 F8WEM9 126 aa8.36□□□□□ -1.07
RAPGEF3-217ENST00000548434 PPDPFLQ8WWR9 84 aa8.36□□□□□ -1.07
RAPGEF3-217ENST00000548434 COX8AP10176 69 aa8.35□□□□□ -1.07
RAPGEF3-217ENST00000548434 Q75L30 129 aa8.35□□□□□ -1.07
RAPGEF3-217ENST00000548434 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
RAPGEF3-217ENST00000548434 DLEU1O43261 78 aa8.34□□□□□ -1.07
RAPGEF3-217ENST00000548434 CFC1P0CG37 223 aa8.34□□□□□ -1.07
RAPGEF3-217ENST00000548434 S100A2P29034 98 aa8.34□□□□□ -1.07
RAPGEF3-217ENST00000548434 C12orf57Q99622 126 aa8.34□□□□□ -1.07
RAPGEF3-217ENST00000548434 BVES-AS1Q5T3Y7 98 aa8.32□□□□□ -1.08
RAPGEF3-217ENST00000548434 Q6Q795 121 aa8.32□□□□□ -1.08
RAPGEF3-217ENST00000548434 H3BUT2 72 aa8.31□□□□□ -1.08
RAPGEF3-217ENST00000548434 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
RAPGEF3-217ENST00000548434 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
RAPGEF3-217ENST00000548434 HIST1H4GQ99525 98 aa8.3□□□□□ -1.08
RAPGEF3-217ENST00000548434 Q96NJ1 140 aa8.28□□□□□ -1.08
RAPGEF3-217ENST00000548434 C2orf91Q6ZV80 131 aa8.27□□□□□ -1.09
RAPGEF3-217ENST00000548434 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
RAPGEF3-217ENST00000548434 SNHG12Q9BXW3 62 aa8.27□□□□□ -1.09
RAPGEF3-217ENST00000548434 HIGD1BQ9P298 99 aa8.27□□□□□ -1.09
RAPGEF3-217ENST00000548434 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
RAPGEF3-217ENST00000548434 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
RAPGEF3-217ENST00000548434 A8MUU9 505 aa8.25□□□□□ -1.09
RAPGEF3-217ENST00000548434 M0R2T5 61 aa8.25□□□□□ -1.09
RAPGEF3-217ENST00000548434 LST1O00453 97 aa8.25□□□□□ -1.09
RAPGEF3-217ENST00000548434 S100A6P06703 90 aa8.25□□□□□ -1.09
RAPGEF3-217ENST00000548434 S100A1P23297 94 aa8.25□□□□□ -1.09
RAPGEF3-217ENST00000548434 A0A0B4J2C4 111 aa8.24□□□□□ -1.09
RAPGEF3-217ENST00000548434 C14orf144Q96I85 54 aa8.24□□□□□ -1.09
RAPGEF3-217ENST00000548434 H0YGX0 51 aa8.23□□□□□ -1.09
RAPGEF3-217ENST00000548434 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
RAPGEF3-217ENST00000548434 ATP11AUNQ6ZP68 121 aa8.23□□□□□ -1.09
RAPGEF3-217ENST00000548434 TEN1Q86WV5 123 aa8.23□□□□□ -1.09
RAPGEF3-217ENST00000548434 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.1
RAPGEF3-217ENST00000548434 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
RAPGEF3-217ENST00000548434 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
RAPGEF3-217ENST00000548434 A0A1B0GX51 115 aa8.18□□□□□ -1.1
RAPGEF3-217ENST00000548434 SPATA45Q537H7 98 aa8.17□□□□□ -1.1
RAPGEF3-217ENST00000548434 CEND1Q8N111 149 aa8.17□□□□□ -1.1
RAPGEF3-217ENST00000548434 RAB37Q96AX2 223 aa8.17□□□□□ -1.1
RAPGEF3-217ENST00000548434 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
RAPGEF3-217ENST00000548434 PAM16Q9Y3D7 125 aa8.17□□□□□ -1.1
RAPGEF3-217ENST00000548434 A0A087WSZ3 146 aa8.16□□□□□ -1.1
RAPGEF3-217ENST00000548434 USH2AO75445 5202 aa8.16□□□□□ -1.1
RAPGEF3-217ENST00000548434 H3BMG7 143 aa8.15□□□□□ -1.1
RAPGEF3-217ENST00000548434 FXYD2P54710 66 aa8.15□□□□□ -1.1
RAPGEF3-217ENST00000548434 PRO1854Q9UHT4 67 aa8.14□□□□□ -1.11
RAPGEF3-217ENST00000548434 TRIAP1O43715 76 aa8.13□□□□□ -1.11
RAPGEF3-217ENST00000548434 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
RAPGEF3-217ENST00000548434 DSCR10P59022 87 aa8.11□□□□□ -1.11
RAPGEF3-217ENST00000548434 NOTCH2NLQ7Z3S9 236 aa8.1□□□□□ -1.11
RAPGEF3-217ENST00000548434 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
RAPGEF3-217ENST00000548434 VAMP8Q9BV40 100 aa8.1□□□□□ -1.11
RAPGEF3-217ENST00000548434 SNCGO76070 127 aa8.09□□□□□ -1.11
RAPGEF3-217ENST00000548434 FABP2P12104 132 aa8.08□□□□□ -1.12
RAPGEF3-217ENST00000548434 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
RAPGEF3-217ENST00000548434 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
RAPGEF3-217ENST00000548434 TMEM238LA0A1B0GVL6 79 aa8.04□□□□□ -1.12
RAPGEF3-217ENST00000548434 A6NJY4 79 aa8.04□□□□□ -1.12
RAPGEF3-217ENST00000548434 GHRHP01286 108 aa8.04□□□□□ -1.12
RAPGEF3-217ENST00000548434 LINC00313P59037 77 aa8.04□□□□□ -1.12
RAPGEF3-217ENST00000548434 HRES1P13985 223 aa8.03□□□□□ -1.12
RAPGEF3-217ENST00000548434 MT2AP02795 61 aa8.02□□□□□ -1.13
RAPGEF3-217ENST00000548434 PYY3Q5JQD4 70 aa8.02□□□□□ -1.13
RAPGEF3-217ENST00000548434 ANKRD29Q8N6D5 301 aa8.02□□□□□ -1.13
RAPGEF3-217ENST00000548434 IGKV4-1P06312 121 aa8.01□□□□□ -1.13
RAPGEF3-217ENST00000548434 K7ERJ3 54 aa8□□□□□ -1.13
RAPGEF3-217ENST00000548434 SIGMAR1Q99720 223 aa8□□□□□ -1.13
RAPGEF3-217ENST00000548434 ORMDL1Q9P0S3 153 aa8□□□□□ -1.13
RAPGEF3-217ENST00000548434 H3BQ85 93 aa7.99□□□□□ -1.13
RAPGEF3-217ENST00000548434 HSD52Q0P140 79 aa7.99□□□□□ -1.13
RAPGEF3-217ENST00000548434 TRBV20-1A0A075B6N2 111 aa7.98□□□□□ -1.13
RAPGEF3-217ENST00000548434 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
RAPGEF3-217ENST00000548434 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
RAPGEF3-217ENST00000548434 UBE2V1Q13404 147 aa7.97□□□□□ -1.13
RAPGEF3-217ENST00000548434 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.14
RAPGEF3-217ENST00000548434 LCE2BO14633 110 aa7.96□□□□□ -1.14
RAPGEF3-217ENST00000548434 MT1FP04733 61 aa7.96□□□□□ -1.14
RAPGEF3-217ENST00000548434 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.14
RAPGEF3-217ENST00000548434 A0A1B0GV72 72 aa7.95□□□□□ -1.14
RAPGEF3-217ENST00000548434 CCKP06307 115 aa7.95□□□□□ -1.14
RAPGEF3-217ENST00000548434 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
RAPGEF3-217ENST00000548434 DNAL4O96015 105 aa7.93□□□□□ -1.14
RAPGEF3-217ENST00000548434 TRACP01848 142 aa7.91□□□□□ -1.14
RAPGEF3-217ENST00000548434 PSMB2P49721 201 aa7.91□□□□□ -1.14
RAPGEF3-217ENST00000548434 IGHV6-1A0A0B4J1U7 121 aa7.9□□□□□ -1.14
RAPGEF3-217ENST00000548434 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
RAPGEF3-217ENST00000548434 COX6CP09669 75 aa7.89□□□□□ -1.15
RAPGEF3-217ENST00000548434 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms