RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SPATA45Q537H7 98 aa7.79□□□□□ -1.16
PTCH1-217ENST00000548420 FP248Q71RG6 208 aaPredicted RBP7.79□□□□□ -1.16
PTCH1-217ENST00000548420 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
PTCH1-217ENST00000548420 TAL2Q16559 108 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 Q8N377 158 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
PTCH1-217ENST00000548420 GHRHP01286 108 aa7.77□□□□□ -1.17
PTCH1-217ENST00000548420 C2orf91Q6ZV80 131 aa7.77□□□□□ -1.17
PTCH1-217ENST00000548420 LINC00575Q6W349 94 aa7.76□□□□□ -1.17
PTCH1-217ENST00000548420 DEFB105AQ8NG35 78 aa7.76□□□□□ -1.17
PTCH1-217ENST00000548420 NHP2Q9NX24 153 aaKnown RBP7.76□□□□□ -1.17
PTCH1-217ENST00000548420 LCE2BO14633 110 aa7.75□□□□□ -1.17
PTCH1-217ENST00000548420 VAMP3Q15836 100 aa7.75□□□□□ -1.17
PTCH1-217ENST00000548420 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
PTCH1-217ENST00000548420 CFC1P0CG37 223 aa7.74□□□□□ -1.17
PTCH1-217ENST00000548420 SLC25A20O43772 301 aa7.73□□□□□ -1.17
PTCH1-217ENST00000548420 Q1RN00 199 aa7.73□□□□□ -1.17
PTCH1-217ENST00000548420 C12orf57Q99622 126 aa7.73□□□□□ -1.17
PTCH1-217ENST00000548420 M0R2T5 61 aa7.72□□□□□ -1.17
PTCH1-217ENST00000548420 CD164Q04900 197 aa7.71□□□□□ -1.18
PTCH1-217ENST00000548420 PRO1933Q9H354 126 aa7.71□□□□□ -1.18
PTCH1-217ENST00000548420 NEBP20929 6669 aa7.7□□□□□ -1.18
PTCH1-217ENST00000548420 A0A0B4J2C4 111 aa7.7□□□□□ -1.18
PTCH1-217ENST00000548420 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
PTCH1-217ENST00000548420 BVES-AS1Q5T3Y7 98 aa7.7□□□□□ -1.18
PTCH1-217ENST00000548420 CEND1Q8N111 149 aa7.69□□□□□ -1.18
PTCH1-217ENST00000548420 Q6ZQY7 126 aa7.68□□□□□ -1.18
PTCH1-217ENST00000548420 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
PTCH1-217ENST00000548420 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
PTCH1-217ENST00000548420 Q5XG85 94 aa7.67□□□□□ -1.18
PTCH1-217ENST00000548420 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
PTCH1-217ENST00000548420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
PTCH1-217ENST00000548420 RAB37Q96AX2 223 aa7.66□□□□□ -1.18
PTCH1-217ENST00000548420 LIMD2Q9BT23 127 aa7.66□□□□□ -1.18
PTCH1-217ENST00000548420 IGLV8-61A0A075B6I0 122 aa7.64□□□□□ -1.19
PTCH1-217ENST00000548420 H7C2G1 150 aa7.64□□□□□ -1.19
PTCH1-217ENST00000548420 FXYD2P54710 66 aa7.64□□□□□ -1.19
PTCH1-217ENST00000548420 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
PTCH1-217ENST00000548420 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
PTCH1-217ENST00000548420 H0YGX0 51 aa7.63□□□□□ -1.19
PTCH1-217ENST00000548420 PRO1854Q9UHT4 67 aa7.63□□□□□ -1.19
PTCH1-217ENST00000548420 HSD52Q0P140 79 aa7.6□□□□□ -1.19
PTCH1-217ENST00000548420 OCIAD2Q56VL3 154 aa7.6□□□□□ -1.19
PTCH1-217ENST00000548420 FAM218AQ96MZ4 157 aa7.6□□□□□ -1.19
PTCH1-217ENST00000548420 F8WEM9 126 aa7.59□□□□□ -1.19
PTCH1-217ENST00000548420 XP32Q5T750 250 aa7.59□□□□□ -1.19
PTCH1-217ENST00000548420 Q6JHZ5 121 aa7.59□□□□□ -1.19
PTCH1-217ENST00000548420 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
PTCH1-217ENST00000548420 A0A1B0GX51 115 aa7.58□□□□□ -1.2
PTCH1-217ENST00000548420 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
PTCH1-217ENST00000548420 IGFL1Q6UW32 110 aa7.57□□□□□ -1.2
PTCH1-217ENST00000548420 TRIAP1O43715 76 aa7.56□□□□□ -1.2
PTCH1-217ENST00000548420 SNCGO76070 127 aa7.56□□□□□ -1.2
PTCH1-217ENST00000548420 KRTAP20-1Q3LI63 56 aa7.56□□□□□ -1.2
PTCH1-217ENST00000548420 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
PTCH1-217ENST00000548420 CLEC2BQ92478 149 aa7.55□□□□□ -1.2
PTCH1-217ENST00000548420 TCL1BO95988 128 aa7.53□□□□□ -1.2
PTCH1-217ENST00000548420 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
PTCH1-217ENST00000548420 TRBV7-7A0A0K0K1E9 115 aa7.52□□□□□ -1.21
PTCH1-217ENST00000548420 K7ERJ3 54 aa7.52□□□□□ -1.21
PTCH1-217ENST00000548420 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
PTCH1-217ENST00000548420 H3BUT2 72 aa7.5□□□□□ -1.21
PTCH1-217ENST00000548420 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
PTCH1-217ENST00000548420 Q6Q795 121 aa7.5□□□□□ -1.21
PTCH1-217ENST00000548420 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
PTCH1-217ENST00000548420 COX6CP09669 75 aa7.47□□□□□ -1.21
PTCH1-217ENST00000548420 PSMB2P49721 201 aa7.46□□□□□ -1.22
PTCH1-217ENST00000548420 H3BMG7 143 aa7.45□□□□□ -1.22
PTCH1-217ENST00000548420 H3BQ85 93 aa7.45□□□□□ -1.22
PTCH1-217ENST00000548420 SMIM6P0DI80 62 aa7.45□□□□□ -1.22
PTCH1-217ENST00000548420 FABP2P12104 132 aa7.45□□□□□ -1.22
PTCH1-217ENST00000548420 TEN1Q86WV5 123 aa7.45□□□□□ -1.22
PTCH1-217ENST00000548420 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
PTCH1-217ENST00000548420 TMEM256-PLSCR3K7ERE1 68 aa7.42□□□□□ -1.22
PTCH1-217ENST00000548420 DNAL4O96015 105 aa7.42□□□□□ -1.22
PTCH1-217ENST00000548420 COX6B2Q6YFQ2 88 aa7.42□□□□□ -1.22
PTCH1-217ENST00000548420 TRACP01848 142 aa7.41□□□□□ -1.22
PTCH1-217ENST00000548420 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
PTCH1-217ENST00000548420 LST1O00453 97 aa7.4□□□□□ -1.22
PTCH1-217ENST00000548420 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.22
PTCH1-217ENST00000548420 MUC12Q9UKN1 5478 aa7.39□□□□□ -1.23
PTCH1-217ENST00000548420 UBE2V1Q13404 147 aa7.39□□□□□ -1.23
PTCH1-217ENST00000548420 M0R143 59 aa7.38□□□□□ -1.23
PTCH1-217ENST00000548420 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
PTCH1-217ENST00000548420 KRTAP19-6Q3LI70 58 aa7.38□□□□□ -1.23
PTCH1-217ENST00000548420 A0A087WSZ3 146 aa7.37□□□□□ -1.23
PTCH1-217ENST00000548420 LOC105371267A0A1B0GV96 52 aa7.37□□□□□ -1.23
PTCH1-217ENST00000548420 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
PTCH1-217ENST00000548420 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
PTCH1-217ENST00000548420 ANKRD29Q8N6D5 301 aa7.36□□□□□ -1.23
PTCH1-217ENST00000548420 Q96NJ1 140 aa7.36□□□□□ -1.23
PTCH1-217ENST00000548420 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
PTCH1-217ENST00000548420 TSTD3H0UI37 97 aa7.31□□□□□ -1.24
PTCH1-217ENST00000548420 BAALC-AS2P0C853 105 aa7.31□□□□□ -1.24
PTCH1-217ENST00000548420 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
PTCH1-217ENST00000548420 OBSCN-AS1Q96MR7 158 aa7.31□□□□□ -1.24
PTCH1-217ENST00000548420 MT2AP02795 61 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms