RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 HIST1H2BLQ99880 126 aa7.14□□□□□ -1.27
CPSF6-204ENST00000547486 VAMP3Q15836 100 aa7.12□□□□□ -1.27
CPSF6-204ENST00000547486 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
CPSF6-204ENST00000547486 Q6ZQY7 126 aa7.11□□□□□ -1.27
CPSF6-204ENST00000547486 hADV29S1A0JD25 119 aa7.1□□□□□ -1.27
CPSF6-204ENST00000547486 TCL1BO95988 128 aa7.1□□□□□ -1.27
CPSF6-204ENST00000547486 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-204ENST00000547486 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
CPSF6-204ENST00000547486 F8WEM9 126 aa7.08□□□□□ -1.28
CPSF6-204ENST00000547486 S100A2P29034 98 aa7.08□□□□□ -1.28
CPSF6-204ENST00000547486 OCIAD2Q56VL3 154 aa7.07□□□□□ -1.28
CPSF6-204ENST00000547486 IGFL1Q6UW32 110 aa7.07□□□□□ -1.28
CPSF6-204ENST00000547486 C12orf57Q99622 126 aa7.07□□□□□ -1.28
CPSF6-204ENST00000547486 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
CPSF6-204ENST00000547486 Q6JHZ5 121 aa7.05□□□□□ -1.28
CPSF6-204ENST00000547486 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
CPSF6-204ENST00000547486 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
CPSF6-204ENST00000547486 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-204ENST00000547486 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.04□□□□□ -1.28
CPSF6-204ENST00000547486 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
CPSF6-204ENST00000547486 HIST1H4GQ99525 98 aa7.03□□□□□ -1.28
CPSF6-204ENST00000547486 H3BUT2 72 aa7.01□□□□□ -1.29
CPSF6-204ENST00000547486 SCGB1D1O95968 90 aa7.01□□□□□ -1.29
CPSF6-204ENST00000547486 S100A6P06703 90 aa7.01□□□□□ -1.29
CPSF6-204ENST00000547486 COX8AP10176 69 aa7.01□□□□□ -1.29
CPSF6-204ENST00000547486 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
CPSF6-204ENST00000547486 SNHG12Q9BXW3 62 aa7□□□□□ -1.29
CPSF6-204ENST00000547486 CFC1P0CG37 223 aa6.99□□□□□ -1.29
CPSF6-204ENST00000547486 PPDPFLQ8WWR9 84 aa6.99□□□□□ -1.29
CPSF6-204ENST00000547486 OBSCN-AS1Q96MR7 158 aa6.99□□□□□ -1.29
CPSF6-204ENST00000547486 M0R2T5 61 aa6.98□□□□□ -1.29
CPSF6-204ENST00000547486 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
CPSF6-204ENST00000547486 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
CPSF6-204ENST00000547486 DLEU1O43261 78 aa6.97□□□□□ -1.29
CPSF6-204ENST00000547486 S100A1P23297 94 aa6.96□□□□□ -1.3
CPSF6-204ENST00000547486 Q75L30 129 aa6.96□□□□□ -1.3
CPSF6-204ENST00000547486 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
CPSF6-204ENST00000547486 FAM218AQ96MZ4 157 aa6.96□□□□□ -1.3
CPSF6-204ENST00000547486 LST1O00453 97 aa6.95□□□□□ -1.3
CPSF6-204ENST00000547486 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
CPSF6-204ENST00000547486 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
CPSF6-204ENST00000547486 H0YGX0 51 aa6.92□□□□□ -1.3
CPSF6-204ENST00000547486 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
CPSF6-204ENST00000547486 Q6Q795 121 aa6.92□□□□□ -1.3
CPSF6-204ENST00000547486 Q96NJ1 140 aa6.92□□□□□ -1.3
CPSF6-204ENST00000547486 HIGD1BQ9P298 99 aa6.92□□□□□ -1.3
CPSF6-204ENST00000547486 A0A0B4J2C4 111 aa6.91□□□□□ -1.3
CPSF6-204ENST00000547486 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
CPSF6-204ENST00000547486 PAM16Q9Y3D7 125 aa6.91□□□□□ -1.3
CPSF6-204ENST00000547486 SPATA45Q537H7 98 aa6.9□□□□□ -1.3
CPSF6-204ENST00000547486 TEN1Q86WV5 123 aa6.9□□□□□ -1.3
CPSF6-204ENST00000547486 A0A087WSZ3 146 aa6.88□□□□□ -1.31
CPSF6-204ENST00000547486 SNCGO76070 127 aa6.88□□□□□ -1.31
CPSF6-204ENST00000547486 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
CPSF6-204ENST00000547486 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
CPSF6-204ENST00000547486 H3BMG7 143 aa6.87□□□□□ -1.31
CPSF6-204ENST00000547486 CEND1Q8N111 149 aa6.87□□□□□ -1.31
CPSF6-204ENST00000547486 A8MUU9 505 aa6.86□□□□□ -1.31
CPSF6-204ENST00000547486 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
CPSF6-204ENST00000547486 A0A1W2PNM2 257 aa6.85□□□□□ -1.31
CPSF6-204ENST00000547486 FABP2P12104 132 aa6.85□□□□□ -1.31
CPSF6-204ENST00000547486 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
CPSF6-204ENST00000547486 A0A1B0GX51 115 aa6.84□□□□□ -1.31
CPSF6-204ENST00000547486 FXYD2P54710 66 aa6.84□□□□□ -1.31
CPSF6-204ENST00000547486 TRIAP1O43715 76 aa6.83□□□□□ -1.32
CPSF6-204ENST00000547486 DSCR10P59022 87 aa6.83□□□□□ -1.32
CPSF6-204ENST00000547486 KRTAP16-1A8MUX0 517 aa6.8□□□□□ -1.32
CPSF6-204ENST00000547486 TMEM238LA0A1B0GVL6 79 aa6.79□□□□□ -1.32
CPSF6-204ENST00000547486 A6NJY4 79 aa6.79□□□□□ -1.32
CPSF6-204ENST00000547486 GHRHP01286 108 aa6.79□□□□□ -1.32
CPSF6-204ENST00000547486 A0A1B0GV72 72 aa6.78□□□□□ -1.32
CPSF6-204ENST00000547486 ANKRD29Q8N6D5 301 aa6.78□□□□□ -1.32
CPSF6-204ENST00000547486 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
CPSF6-204ENST00000547486 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
CPSF6-204ENST00000547486 SIGMAR1Q99720 223 aa6.77□□□□□ -1.33
CPSF6-204ENST00000547486 TRBV7-4A0A0J9YYF1 115 aa6.76□□□□□ -1.33
CPSF6-204ENST00000547486 K7ERJ3 54 aa6.76□□□□□ -1.33
CPSF6-204ENST00000547486 IGKV4-1P06312 121 aa6.76□□□□□ -1.33
CPSF6-204ENST00000547486 LINC00313P59037 77 aa6.76□□□□□ -1.33
CPSF6-204ENST00000547486 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
CPSF6-204ENST00000547486 DEFB116Q30KQ4 102 aa6.75□□□□□ -1.33
CPSF6-204ENST00000547486 ORMDL1Q9P0S3 153 aa6.75□□□□□ -1.33
CPSF6-204ENST00000547486 PSMB2P49721 201 aa6.74□□□□□ -1.33
CPSF6-204ENST00000547486 PYY3Q5JQD4 70 aa6.74□□□□□ -1.33
CPSF6-204ENST00000547486 DNAL4O96015 105 aa6.73□□□□□ -1.33
CPSF6-204ENST00000547486 HSD52Q0P140 79 aa6.73□□□□□ -1.33
CPSF6-204ENST00000547486 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
CPSF6-204ENST00000547486 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
CPSF6-204ENST00000547486 H3BQ85 93 aa6.71□□□□□ -1.34
CPSF6-204ENST00000547486 CCKP06307 115 aa6.71□□□□□ -1.34
CPSF6-204ENST00000547486 USH2AO75445 5202 aa6.69□□□□□ -1.34
CPSF6-204ENST00000547486 COX6CP09669 75 aa6.69□□□□□ -1.34
CPSF6-204ENST00000547486 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
CPSF6-204ENST00000547486 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 TRACP01848 142 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 HRES1P13985 223 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 UBE2V1Q13404 147 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 SSPOA2VEC9 5147 aa6.68□□□□□ -1.34
CPSF6-204ENST00000547486 MT2AP02795 61 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms