RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 DEFB109BQ30KR1 87 aa1.37□□□□□ -2.19
LGR5-204ENST00000547310 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
LGR5-204ENST00000547310 PRCDQ00LT1 54 aa1.36□□□□□ -2.19
LGR5-204ENST00000547310 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.19
LGR5-204ENST00000547310 A0A0D9SG42 100 aa1.34□□□□□ -2.19
LGR5-204ENST00000547310 M0QY20 66 aa1.34□□□□□ -2.19
LGR5-204ENST00000547310 PIEZO2Q9H5I5 2752 aa1.34□□□□□ -2.2
LGR5-204ENST00000547310 PTPRZ1P23471 2315 aaPredicted RBP1.33□□□□□ -2.2
LGR5-204ENST00000547310 H3BSH0 61 aa1.33□□□□□ -2.2
LGR5-204ENST00000547310 LEAP2Q969E1 77 aa1.33□□□□□ -2.2
LGR5-204ENST00000547310 PDE4DIPQ5VU43 2346 aa1.33□□□□□ -2.2
LGR5-204ENST00000547310 PRLHP81277 87 aa1.32□□□□□ -2.2
LGR5-204ENST00000547310 KLK9Q2XQG4 91 aa1.32□□□□□ -2.2
LGR5-204ENST00000547310 S4R3F8 94 aa1.32□□□□□ -2.2
LGR5-204ENST00000547310 WNK2Q9Y3S1 2297 aa1.32□□□□□ -2.2
LGR5-204ENST00000547310 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
LGR5-204ENST00000547310 NOP10Q9NPE3 64 aaKnown RBP1.3□□□□□ -2.2
LGR5-204ENST00000547310 DEFB106AQ8N104 65 aa1.28□□□□□ -2.2
LGR5-204ENST00000547310 USF3Q68DE3 2245 aa1.28□□□□□ -2.2
LGR5-204ENST00000547310 RP1L1Q8IWN7 2480 aaPredicted RBP1.27□□□□□ -2.21
LGR5-204ENST00000547310 ROS1P08922 2347 aa1.27□□□□□ -2.21
LGR5-204ENST00000547310 TPRP12270 2363 aaKnown RBP1.27□□□□□ -2.21
LGR5-204ENST00000547310 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
LGR5-204ENST00000547310 KNL1Q8NG31 2342 aa1.26□□□□□ -2.21
LGR5-204ENST00000547310 TOMM7Q9P0U1 55 aa1.26□□□□□ -2.21
LGR5-204ENST00000547310 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
LGR5-204ENST00000547310 PCNX1Q96RV3 2341 aa1.25□□□□□ -2.21
LGR5-204ENST00000547310 A8MTW9 85 aa1.25□□□□□ -2.21
LGR5-204ENST00000547310 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
LGR5-204ENST00000547310 K7EIM0 57 aa1.23□□□□□ -2.21
LGR5-204ENST00000547310 TMEM167AQ8TBQ9 72 aa1.23□□□□□ -2.21
LGR5-204ENST00000547310 IGF2RP11717 2491 aa1.22□□□□□ -2.21
LGR5-204ENST00000547310 C2CD3Q4AC94 2353 aa1.22□□□□□ -2.21
LGR5-204ENST00000547310 KRTAP10-4P60372 401 aaPredicted RBP1.21□□□□□ -2.22
LGR5-204ENST00000547310 SPINK1P00995 79 aa1.2□□□□□ -2.22
LGR5-204ENST00000547310 ASH1LQ9NR48 2969 aaKnown RBP1.17□□□□□ -2.22
LGR5-204ENST00000547310 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
LGR5-204ENST00000547310 DEFB104AQ8WTQ1 72 aa1.16□□□□□ -2.22
LGR5-204ENST00000547310 MEGF8Q7Z7M0 2845 aa1.16□□□□□ -2.22
LGR5-204ENST00000547310 SPTBN2O15020 2390 aa1.16□□□□□ -2.22
LGR5-204ENST00000547310 M0QZ58 72 aa1.15□□□□□ -2.23
LGR5-204ENST00000547310 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
LGR5-204ENST00000547310 CSPG4Q6UVK1 2322 aa1.14□□□□□ -2.23
LGR5-204ENST00000547310 RPL39P5Q59GN2 51 aa1.14□□□□□ -2.23
LGR5-204ENST00000547310 SPTBN1Q01082 2364 aaKnown RBP1.13□□□□□ -2.23
LGR5-204ENST00000547310 H0YGG7 62 aa1.13□□□□□ -2.23
LGR5-204ENST00000547310 REV3LO60673 3130 aa1.13□□□□□ -2.23
LGR5-204ENST00000547310 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
LGR5-204ENST00000547310 ABCA2Q9BZC7 2435 aa1.12□□□□□ -2.23
LGR5-204ENST00000547310 DSPP15924 2871 aaKnown RBP1.1□□□□□ -2.23
LGR5-204ENST00000547310 F8P00451 2351 aa1.1□□□□□ -2.23
LGR5-204ENST00000547310 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
LGR5-204ENST00000547310 TTC28Q96AY4 2481 aa1.1□□□□□ -2.23
LGR5-204ENST00000547310 DEFB108AA8MXU0 73 aa1.09□□□□□ -2.23
LGR5-204ENST00000547310 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
LGR5-204ENST00000547310 M0R2T5 61 aa1.06□□□□□ -2.24
LGR5-204ENST00000547310 ABCA12Q86UK0 2595 aa1.06□□□□□ -2.24
LGR5-204ENST00000547310 GVINP1Q7Z2Y8 2422 aa1.05□□□□□ -2.24
LGR5-204ENST00000547310 AKAP6Q13023 2319 aa1.04□□□□□ -2.24
LGR5-204ENST00000547310 SPINK6Q6UWN8 80 aa1.04□□□□□ -2.24
LGR5-204ENST00000547310 ZNF292O60281 2723 aa1.04□□□□□ -2.24
LGR5-204ENST00000547310 TRANK1O15050 2925 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 C9orf92A6NGG3 77 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 H3BUX3 64 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 TNP1P09430 55 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 SMR3AQ99954 134 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 CELSR2Q9HCU4 2923 aa1.03□□□□□ -2.24
LGR5-204ENST00000547310 PRRC2CQ9Y520 2896 aaKnown RBP1.02□□□□□ -2.25
LGR5-204ENST00000547310 POLQO75417 2590 aa1.02□□□□□ -2.25
LGR5-204ENST00000547310 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
LGR5-204ENST00000547310 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
LGR5-204ENST00000547310 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
LGR5-204ENST00000547310 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
LGR5-204ENST00000547310 EP300Q09472 2414 aaPredicted RBP1.01□□□□□ -2.25
LGR5-204ENST00000547310 WNK1Q9H4A3 2382 aa1□□□□□ -2.25
LGR5-204ENST00000547310 CEP290O15078 2479 aa1□□□□□ -2.25
LGR5-204ENST00000547310 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
LGR5-204ENST00000547310 TENM4Q6N022 2769 aa0.99□□□□□ -2.25
LGR5-204ENST00000547310 CSMD3Q7Z407 3707 aa0.97□□□□□ -2.25
LGR5-204ENST00000547310 CELSR1Q9NYQ6 3014 aa0.97□□□□□ -2.25
LGR5-204ENST00000547310 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
LGR5-204ENST00000547310 CHD9Q3L8U1 2897 aa0.96□□□□□ -2.26
LGR5-204ENST00000547310 RHPN1-AS1Q9BWJ2 59 aa0.95□□□□□ -2.26
LGR5-204ENST00000547310 U3KQA8 63 aa0.95□□□□□ -2.26
LGR5-204ENST00000547310 COL6A5A8TX70 2615 aa0.95□□□□□ -2.26
LGR5-204ENST00000547310 APELAP0DMC3 54 aa0.94□□□□□ -2.26
LGR5-204ENST00000547310 TENM2Q9NT68 2774 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 SPTA1P02549 2419 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 H3BNG1 76 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 CHD7Q9P2D1 2997 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 VWFP04275 2813 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 AKAP13Q12802 2813 aa0.93□□□□□ -2.26
LGR5-204ENST00000547310 HECTD1Q9ULT8 2610 aa0.92□□□□□ -2.26
LGR5-204ENST00000547310 NAV2Q8IVL1 2488 aa0.92□□□□□ -2.26
LGR5-204ENST00000547310 ACACAQ13085 2346 aa0.92□□□□□ -2.26
LGR5-204ENST00000547310 NCOR1O75376 2440 aa0.92□□□□□ -2.26
LGR5-204ENST00000547310 NOTCH1P46531 2555 aa0.91□□□□□ -2.26
LGR5-204ENST00000547310 SRRM2Q9UQ35 2752 aaKnown RBP0.91□□□□□ -2.26
LGR5-204ENST00000547310 VPS13DQ5THJ4 4388 aa0.9□□□□□ -2.27
LGR5-204ENST00000547310 DEFB1P60022 68 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms