RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 PRO1933Q9H354 126 aa14.63□□□□□ -0.07
SRSF9-202ENST00000546942 LCE2AQ5TA79 106 aaPredicted RBP14.62□□□□□ -0.07
SRSF9-202ENST00000546942 LINC01547P58512 204 aaPredicted RBP14.61□□□□□ -0.07
SRSF9-202ENST00000546942 SMIM29Q86T20 159 aa14.61□□□□□ -0.07
SRSF9-202ENST00000546942 H7C2G1 150 aa14.6□□□□□ -0.07
SRSF9-202ENST00000546942 hADV29S1A0JD25 119 aa14.59□□□□□ -0.07
SRSF9-202ENST00000546942 XP32Q5T750 250 aa14.58□□□□□ -0.08
SRSF9-202ENST00000546942 A0A0G2JQZ4 141 aa14.57□□□□□ -0.08
SRSF9-202ENST00000546942 CD164Q04900 197 aa14.56□□□□□ -0.08
SRSF9-202ENST00000546942 KRTAP4-1Q9BYQ7 146 aa14.56□□□□□ -0.08
SRSF9-202ENST00000546942 UQCR10Q9UDW1 63 aa14.56□□□□□ -0.08
SRSF9-202ENST00000546942 HSD52Q0P140 79 aa14.55□□□□□ -0.08
SRSF9-202ENST00000546942 PRO1854Q9UHT4 67 aa14.54□□□□□ -0.08
SRSF9-202ENST00000546942 C9orf92A6NGG3 77 aa14.53□□□□□ -0.08
SRSF9-202ENST00000546942 H0YGX0 51 aa14.52□□□□□ -0.09
SRSF9-202ENST00000546942 SNCGO76070 127 aa14.52□□□□□ -0.09
SRSF9-202ENST00000546942 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.52□□□□□ -0.09
SRSF9-202ENST00000546942 FXYD2P54710 66 aa14.51□□□□□ -0.09
SRSF9-202ENST00000546942 Q6ZQY7 126 aa14.51□□□□□ -0.09
SRSF9-202ENST00000546942 PPDPFLQ8WWR9 84 aa14.49□□□□□ -0.09
SRSF9-202ENST00000546942 F8WEM9 126 aa14.45□□□□□ -0.1
SRSF9-202ENST00000546942 OCIAD2Q56VL3 154 aa14.44□□□□□ -0.1
SRSF9-202ENST00000546942 A0A1B0GX51 115 aa14.42□□□□□ -0.1
SRSF9-202ENST00000546942 C1orf195Q5TG92 126 aa14.41□□□□□ -0.1
SRSF9-202ENST00000546942 Q5XG85 94 aa14.41□□□□□ -0.1
SRSF9-202ENST00000546942 SMIM6P0DI80 62 aa14.39□□□□□ -0.11
SRSF9-202ENST00000546942 GHRHP01286 108 aa14.38□□□□□ -0.11
SRSF9-202ENST00000546942 IGLV8-61A0A075B6I0 122 aa14.37□□□□□ -0.11
SRSF9-202ENST00000546942 PCOTHQ58A44 107 aa14.37□□□□□ -0.11
SRSF9-202ENST00000546942 Q6JHZ5 121 aa14.37□□□□□ -0.11
SRSF9-202ENST00000546942 KRTAP9-2Q9BYQ4 174 aa14.37□□□□□ -0.11
SRSF9-202ENST00000546942 SNHG12Q9BXW3 62 aa14.35□□□□□ -0.11
SRSF9-202ENST00000546942 TRIAP1O43715 76 aa14.33□□□□□ -0.12
SRSF9-202ENST00000546942 TCL1BO95988 128 aa14.33□□□□□ -0.12
SRSF9-202ENST00000546942 FAM218AQ96MZ4 157 aa14.33□□□□□ -0.12
SRSF9-202ENST00000546942 COX6CP09669 75 aa14.32□□□□□ -0.12
SRSF9-202ENST00000546942 K7ERJ3 54 aa14.3□□□□□ -0.12
SRSF9-202ENST00000546942 PSMB2P49721 201 aa14.29□□□□□ -0.12
SRSF9-202ENST00000546942 CLEC2BQ92478 149 aa14.28□□□□□ -0.12
SRSF9-202ENST00000546942 IGFL1Q6UW32 110 aa14.27□□□□□ -0.13
SRSF9-202ENST00000546942 H3BQ85 93 aa14.25□□□□□ -0.13
SRSF9-202ENST00000546942 M0R143 59 aa14.23□□□□□ -0.13
SRSF9-202ENST00000546942 TRBV7-7A0A0K0K1E9 115 aa14.22□□□□□ -0.13
SRSF9-202ENST00000546942 DNAL4O96015 105 aa14.22□□□□□ -0.13
SRSF9-202ENST00000546942 NDUFV3P56181 108 aaKnown RBP14.21□□□□□ -0.13
SRSF9-202ENST00000546942 H3BUT2 72 aa14.19□□□□□ -0.14
SRSF9-202ENST00000546942 TSTD3H0UI37 97 aa14.17□□□□□ -0.14
SRSF9-202ENST00000546942 LOC105371267A0A1B0GV96 52 aa14.16□□□□□ -0.14
SRSF9-202ENST00000546942 FABP2P12104 132 aa14.16□□□□□ -0.14
SRSF9-202ENST00000546942 RPL37P61927 97 aaKnown RBP14.16□□□□□ -0.14
SRSF9-202ENST00000546942 ORMDL1Q9P0S3 153 aa14.16□□□□□ -0.14
SRSF9-202ENST00000546942 LCE2CQ5TA81 110 aa14.15□□□□□ -0.14
SRSF9-202ENST00000546942 Q6Q795 121 aa14.13□□□□□ -0.15
SRSF9-202ENST00000546942 H3BMG7 143 aa14.12□□□□□ -0.15
SRSF9-202ENST00000546942 TMEM256-PLSCR3K7ERE1 68 aa14.12□□□□□ -0.15
SRSF9-202ENST00000546942 TRACP01848 142 aa14.12□□□□□ -0.15
SRSF9-202ENST00000546942 SCGB1C2P0DMR2 95 aa14.12□□□□□ -0.15
SRSF9-202ENST00000546942 KRTAP19-2Q3LHN2 52 aa14.11□□□□□ -0.15
SRSF9-202ENST00000546942 LST1O00453 97 aa14.08□□□□□ -0.16
SRSF9-202ENST00000546942 TEN1Q86WV5 123 aa14.08□□□□□ -0.16
SRSF9-202ENST00000546942 SS18L2Q9UHA2 77 aa14.06□□□□□ -0.16
SRSF9-202ENST00000546942 OBSCN-AS1Q96MR7 158 aa14.04□□□□□ -0.16
SRSF9-202ENST00000546942 UBE2V1Q13404 147 aa14.03□□□□□ -0.16
SRSF9-202ENST00000546942 MT1HP80294 61 aa14□□□□□ -0.17
SRSF9-202ENST00000546942 ANKRD29Q8N6D5 301 aa13.98□□□□□ -0.17
SRSF9-202ENST00000546942 LYRM7Q5U5X0 104 aa13.95□□□□□ -0.18
SRSF9-202ENST00000546942 ATXN8Q156A1 80 aa13.94□□□□□ -0.18
SRSF9-202ENST00000546942 A0A087WSZ3 146 aa13.93□□□□□ -0.18
SRSF9-202ENST00000546942 TRBV7-4A0A0J9YYF1 115 aa13.92□□□□□ -0.18
SRSF9-202ENST00000546942 COX6B2Q6YFQ2 88 aa13.92□□□□□ -0.18
SRSF9-202ENST00000546942 Q96NJ1 140 aa13.92□□□□□ -0.18
SRSF9-202ENST00000546942 A0A1W2PNM2 257 aa13.91□□□□□ -0.18
SRSF9-202ENST00000546942 ATP11AUNQ6ZP68 121 aa13.91□□□□□ -0.18
SRSF9-202ENST00000546942 KRTAP9-6A0A140TA67 174 aa13.89□□□□□ -0.19
SRSF9-202ENST00000546942 BAALC-AS2P0C853 105 aa13.89□□□□□ -0.19
SRSF9-202ENST00000546942 BATFQ16520 125 aa13.89□□□□□ -0.19
SRSF9-202ENST00000546942 Q75L30 129 aa13.89□□□□□ -0.19
SRSF9-202ENST00000546942 A0A1B0GV72 72 aa13.88□□□□□ -0.19
SRSF9-202ENST00000546942 RBM3P98179 157 aaKnown RBP13.87□□□□□ -0.19
SRSF9-202ENST00000546942 NAA38Q9BRA0 125 aaKnown RBP13.87□□□□□ -0.19
SRSF9-202ENST00000546942 TRBV20-1A0A075B6N2 111 aa13.86□□□□□ -0.19
SRSF9-202ENST00000546942 LCE2DQ5TA82 110 aaPredicted RBP13.86□□□□□ -0.19
SRSF9-202ENST00000546942 CCKP06307 115 aa13.84□□□□□ -0.19
SRSF9-202ENST00000546942 M0R2T5 61 aa13.83□□□□□ -0.2
SRSF9-202ENST00000546942 DSCR8Q96T75 97 aa13.83□□□□□ -0.2
SRSF9-202ENST00000546942 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
SRSF9-202ENST00000546942 C9orf118A6NHY6 69 aa13.78□□□□□ -0.2
SRSF9-202ENST00000546942 JMJD7-PLA2G4BH0Y9G9 81 aa13.78□□□□□ -0.2
SRSF9-202ENST00000546942 SIGMAR1Q99720 223 aa13.78□□□□□ -0.2
SRSF9-202ENST00000546942 FLGP20930 4061 aaPredicted RBP13.77□□□□□ -0.21
SRSF9-202ENST00000546942 C9JAW5 83 aa13.76□□□□□ -0.21
SRSF9-202ENST00000546942 DSCR10P59022 87 aa13.76□□□□□ -0.21
SRSF9-202ENST00000546942 KRTAP10-6P60371 365 aaPredicted RBP13.74□□□□□ -0.21
SRSF9-202ENST00000546942 C20orf166-AS1Q96NR2 134 aa13.74□□□□□ -0.21
SRSF9-202ENST00000546942 TAX1BP3O14907 124 aa13.73□□□□□ -0.21
SRSF9-202ENST00000546942 A8MUU9 505 aa13.71□□□□□ -0.21
SRSF9-202ENST00000546942 PDE6GP18545 87 aa13.71□□□□□ -0.21
SRSF9-202ENST00000546942 LORP23490 312 aaPredicted RBP13.71□□□□□ -0.21
SRSF9-202ENST00000546942 A0A1W2PPM0 123 aa13.7□□□□□ -0.22
SRSF9-202ENST00000546942 IGKV4-1P06312 121 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms