RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MTORP42345 2549 aa-1.29□□□□□ -2.62
CCDC38-204ENST00000546816 DNAH1Q9P2D7 4330 aa-1.29□□□□□ -2.62
CCDC38-204ENST00000546816 NWD1Q149M9 1564 aa-1.3□□□□□ -2.62
CCDC38-204ENST00000546816 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.3□□□□□ -2.62
CCDC38-204ENST00000546816 MAP3K1Q13233 1512 aa-1.3□□□□□ -2.62
CCDC38-204ENST00000546816 SCN11AQ9UI33 1791 aa-1.3□□□□□ -2.62
CCDC38-204ENST00000546816 MYMXA0A1B0GTQ4 84 aa-1.31□□□□□ -2.62
CCDC38-204ENST00000546816 NESP48681 1621 aa-1.31□□□□□ -2.62
CCDC38-204ENST00000546816 MGAM2Q2M2H8 2515 aa-1.32□□□□□ -2.62
CCDC38-204ENST00000546816 PRLHP81277 87 aa-1.32□□□□□ -2.62
CCDC38-204ENST00000546816 NBEAQ8NFP9 2946 aa-1.32□□□□□ -2.62
CCDC38-204ENST00000546816 H0YAA0 97 aa-1.33□□□□□ -2.62
CCDC38-204ENST00000546816 PKIAP61925 76 aa-1.33□□□□□ -2.62
CCDC38-204ENST00000546816 DOT1LQ8TEK3 1739 aa-1.33□□□□□ -2.62
CCDC38-204ENST00000546816 UTP20O75691 2785 aaKnown RBP-1.33□□□□□ -2.62
CCDC38-204ENST00000546816 WDR87Q6ZQQ6 2873 aa-1.33□□□□□ -2.62
CCDC38-204ENST00000546816 RGPD3A6NKT7 1758 aaPredicted RBP-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 LTN1O94822 1766 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 RGPD4Q7Z3J3 1758 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 ACACAQ13085 2346 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 LCE6AA0A183 80 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 NDUFB1O75438 58 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 S100A8P05109 93 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 DEPDC5O75140 1603 aa-1.34□□□□□ -2.62
CCDC38-204ENST00000546816 TMEM131LA2VDJ0 1609 aa-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 RABAC1Q9UI14 185 aa-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 S4R3F8 94 aa-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 AKAP12Q02952 1782 aa-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 USP9XQ93008 2570 aaPredicted RBP-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 LRRK2Q5S007 2527 aa-1.35□□□□□ -2.63
CCDC38-204ENST00000546816 TRIOO75962 3097 aa-1.36□□□□□ -2.63
CCDC38-204ENST00000546816 SACSQ9NZJ4 4579 aa-1.36□□□□□ -2.63
CCDC38-204ENST00000546816 PYY3Q5JQD4 70 aa-1.36□□□□□ -2.63
CCDC38-204ENST00000546816 ZNF831Q5JPB2 1677 aa-1.36□□□□□ -2.63
CCDC38-204ENST00000546816 PLIN4Q96Q06 1357 aa-1.36□□□□□ -2.63
CCDC38-204ENST00000546816 NCOA2Q15596 1464 aa-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 PLECQ15149 4684 aaKnown RBP-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 CEBPZOSA8MTT3 80 aa-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 LYNX1G3V0Z9 82 aa-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 SNRPFP62306 86 aaKnown RBP-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 LINC00643Q86TS7 51 aa-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 ABCA13Q86UQ4 5058 aa-1.37□□□□□ -2.63
CCDC38-204ENST00000546816 NIPBLQ6KC79 2804 aaeCLIP-1.38□□□□□ -2.63
CCDC38-204ENST00000546816 DIP2BQ9P265 1576 aa-1.38□□□□□ -2.63
CCDC38-204ENST00000546816 FAM186AA6NE01 2351 aa-1.39□□□□□ -2.63
CCDC38-204ENST00000546816 URB2Q14146 1524 aaKnown RBP-1.39□□□□□ -2.63
CCDC38-204ENST00000546816 LAMA3Q16787 3333 aa-1.39□□□□□ -2.63
CCDC38-204ENST00000546816 DNAH8Q96JB1 4490 aa-1.39□□□□□ -2.63
CCDC38-204ENST00000546816 MAGI3Q5TCQ9 1506 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 K7EP34 96 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 DEFB130BP0DP73 79 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 DEFB130AP0DP74 79 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 MT1HP80294 61 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 NBEAL2Q6ZNJ1 2754 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 RELNP78509 3460 aa-1.4□□□□□ -2.63
CCDC38-204ENST00000546816 CCNB3Q8WWL7 1395 aa-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 A0A0C4DFX4 3053 aa-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 ACYP1P07311 99 aa-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 IFI6P09912 130 aa-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 S100A16Q96FQ6 103 aaKnown RBP-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 DNHD1Q96M86 4753 aa-1.41□□□□□ -2.64
CCDC38-204ENST00000546816 RANBP2P49792 3224 aaKnown RBP-1.42□□□□□ -2.64
CCDC38-204ENST00000546816 DEFA5Q01523 94 aa-1.42□□□□□ -2.64
CCDC38-204ENST00000546816 PKD1L2Q7Z442 2459 aa-1.42□□□□□ -2.64
CCDC38-204ENST00000546816 CCDC88BA6NC98 1476 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 ABCC3O15438 1527 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 UMAD1C9J7I0 102 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 IAPPP10997 89 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 IFI27P40305 119 aaPredicted RBP-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 DEFB110Q30KQ9 67 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 ACACBO00763 2458 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 CEP290O15078 2479 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 CMYA5Q8N3K9 4069 aa-1.43□□□□□ -2.64
CCDC38-204ENST00000546816 ARFGEF2Q9Y6D5 1785 aa-1.44□□□□□ -2.64
CCDC38-204ENST00000546816 CCDC168Q8NDH2 2452 aa-1.44□□□□□ -2.64
CCDC38-204ENST00000546816 CELSR3Q9NYQ7 3312 aa-1.45□□□□□ -2.64
CCDC38-204ENST00000546816 TEX15Q9BXT5 2789 aa-1.45□□□□□ -2.64
CCDC38-204ENST00000546816 RIF1Q5UIP0 2472 aaKnown RBP-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 KIF14Q15058 1648 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 PVALEFA0A1B0GWK0 134 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 NDUFA4O00483 81 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 KRTAP19-5Q3LI72 72 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 Q9H521 79 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 V9GYS6 101 aa-1.46□□□□□ -2.64
CCDC38-204ENST00000546816 PIK3C2BO00750 1634 aa-1.47□□□□□ -2.64
CCDC38-204ENST00000546816 MAP3K4Q9Y6R4 1608 aa-1.47□□□□□ -2.64
CCDC38-204ENST00000546816 DEFB106AQ8N104 65 aa-1.47□□□□□ -2.64
CCDC38-204ENST00000546816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.48□□□□□ -2.65
CCDC38-204ENST00000546816 COL12A1Q99715 3063 aa-1.48□□□□□ -2.65
CCDC38-204ENST00000546816 DDX60LQ5H9U9 1706 aaKnown RBP-1.49□□□□□ -2.65
CCDC38-204ENST00000546816 DNAH7Q8WXX0 4024 aa-1.5□□□□□ -2.65
CCDC38-204ENST00000546816 NREPQ16612 68 aa-1.5□□□□□ -2.65
CCDC38-204ENST00000546816 TTC37Q6PGP7 1564 aa-1.51□□□□□ -2.65
CCDC38-204ENST00000546816 PLCH1Q4KWH8 1693 aa-1.51□□□□□ -2.65
CCDC38-204ENST00000546816 PPLO60437 1756 aa-1.52□□□□□ -2.65
CCDC38-204ENST00000546816 DEFB131BA0A096LNP1 70 aa-1.52□□□□□ -2.65
CCDC38-204ENST00000546816 KANTRA0A1W2PQU2 76 aa-1.52□□□□□ -2.65
CCDC38-204ENST00000546816 DEFB1P60022 68 aa-1.52□□□□□ -2.65
CCDC38-204ENST00000546816 TDRG1Q3Y452 100 aa-1.52□□□□□ -2.65
CCDC38-204ENST00000546816 ATP5EP2Q5VTU8 51 aa-1.52□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms