RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 HIVEP2P31629 2446 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 GVINP1Q7Z2Y8 2422 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP9-7A8MTY7 169 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP10-1P60331 282 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP10-3P60369 221 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 KRTAP1-1Q07627 177 aa0.84□□□□□ -2.27
CFTR-207ENST00000546407 ZNF462Q96JM2 2506 aa0.84□□□□□ -2.28
CFTR-207ENST00000546407 SPTBN1Q01082 2364 aaKnown RBP0.83□□□□□ -2.28
CFTR-207ENST00000546407 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 DSPP15924 2871 aaKnown RBP0.82□□□□□ -2.28
CFTR-207ENST00000546407 CREBBPQ92793 2442 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 H3BNG1 76 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 KRTAP10-10P60014 251 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 DEFB136Q30KP8 78 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 KRTAP13-1Q8IUC0 172 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 DEFB124Q8NES8 71 aa0.82□□□□□ -2.28
CFTR-207ENST00000546407 ABCA2Q9BZC7 2435 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 A0A0C4DFX4 3053 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 GPR179Q6PRD1 2367 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 ACACAQ13085 2346 aa0.81□□□□□ -2.28
CFTR-207ENST00000546407 PKD1L2Q7Z442 2459 aa0.8□□□□□ -2.28
CFTR-207ENST00000546407 A0A096LNI7 61 aa0.8□□□□□ -2.28
CFTR-207ENST00000546407 LINC01556Q5JQF7 62 aa0.8□□□□□ -2.28
CFTR-207ENST00000546407 APC2O95996 2303 aa0.8□□□□□ -2.28
CFTR-207ENST00000546407 EP300Q09472 2414 aaPredicted RBP0.79□□□□□ -2.28
CFTR-207ENST00000546407 HECTD1Q9ULT8 2610 aa0.79□□□□□ -2.28
CFTR-207ENST00000546407 SPINK6Q6UWN8 80 aa0.79□□□□□ -2.28
CFTR-207ENST00000546407 MUC6Q6W4X9 2439 aa0.79□□□□□ -2.28
CFTR-207ENST00000546407 DMBT1Q9UGM3 2413 aaPredicted RBP0.79□□□□□ -2.28
CFTR-207ENST00000546407 CSPG4Q6UVK1 2322 aa0.78□□□□□ -2.28
CFTR-207ENST00000546407 A0A096LPF7 62 aa0.78□□□□□ -2.28
CFTR-207ENST00000546407 DEFB133Q30KQ1 61 aa0.78□□□□□ -2.28
CFTR-207ENST00000546407 LCE1FQ5T754 118 aa0.78□□□□□ -2.28
CFTR-207ENST00000546407 REV3LO60673 3130 aa0.78□□□□□ -2.29
CFTR-207ENST00000546407 RIF1Q5UIP0 2472 aaKnown RBP0.77□□□□□ -2.29
CFTR-207ENST00000546407 SPART-AS1P0CW21 52 aa0.77□□□□□ -2.29
CFTR-207ENST00000546407 KRTAP6-3Q3LI67 103 aa0.77□□□□□ -2.29
CFTR-207ENST00000546407 LCE1AQ5T7P2 110 aa0.77□□□□□ -2.29
CFTR-207ENST00000546407 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.77□□□□□ -2.29
CFTR-207ENST00000546407 TNP1P09430 55 aa0.76□□□□□ -2.29
CFTR-207ENST00000546407 NBASA2RRP1 2371 aa0.76□□□□□ -2.29
CFTR-207ENST00000546407 NOTCH3Q9UM47 2321 aa0.76□□□□□ -2.29
CFTR-207ENST00000546407 ABCA12Q86UK0 2595 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 NAV2Q8IVL1 2488 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 CCDC168Q8NDH2 2452 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 F8P00451 2351 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 KRTAP12-4P60329 112 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 KRTAP1-5Q9BYS1 174 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 MAP1BP46821 2468 aaKnown RBP0.75□□□□□ -2.29
CFTR-207ENST00000546407 TRANK1O15050 2925 aa0.75□□□□□ -2.29
CFTR-207ENST00000546407 SETD2Q9BYW2 2564 aaPredicted RBP0.74□□□□□ -2.29
CFTR-207ENST00000546407 C9orf92A6NGG3 77 aa0.74□□□□□ -2.29
CFTR-207ENST00000546407 RPS29P62273 56 aaKnown RBP0.74□□□□□ -2.29
CFTR-207ENST00000546407 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
CFTR-207ENST00000546407 BAHCC1Q9P281 2608 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 EPG5Q9HCE0 2579 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 ANKHD1Q8IWZ3 2542 aaKnown RBP0.73□□□□□ -2.29
CFTR-207ENST00000546407 ACANP16112 2415 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 LCE1EQ5T753 118 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 U3KQA8 63 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 NCOR2Q9Y618 2525 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 CEP290O15078 2479 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 UBR5O95071 2799 aaPredicted RBP0.73□□□□□ -2.29
CFTR-207ENST00000546407 HIVEP3Q5T1R4 2406 aa0.73□□□□□ -2.29
CFTR-207ENST00000546407 MGAQ8IWI9 3026 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 J3QKU1 62 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 KRTAP21-3Q3LHN1 58 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
CFTR-207ENST00000546407 FBN1P35555 2871 aaKnown RBP0.71□□□□□ -2.3
CFTR-207ENST00000546407 PRRC2CQ9Y520 2896 aaKnown RBP0.71□□□□□ -2.3
CFTR-207ENST00000546407 SPTBN4Q9H254 2564 aa0.71□□□□□ -2.3
CFTR-207ENST00000546407 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP10-7P60409 375 aaPredicted RBP0.71□□□□□ -2.3
CFTR-207ENST00000546407 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
CFTR-207ENST00000546407 LRRK2Q5S007 2527 aa0.71□□□□□ -2.3
CFTR-207ENST00000546407 SRRM2Q9UQ35 2752 aaKnown RBP0.7□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
CFTR-207ENST00000546407 LCE3CQ5T5A8 94 aa0.7□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
CFTR-207ENST00000546407 BDP1A6H8Y1 2624 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 DNAH11Q96DT5 4516 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 AKAP13Q12802 2813 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 M0R2T5 61 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 HTN3P15516 51 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP10-12P60413 245 aa0.69□□□□□ -2.3
CFTR-207ENST00000546407 ASH1LQ9NR48 2969 aaKnown RBP0.69□□□□□ -2.3
CFTR-207ENST00000546407 ITPR1Q14643 2758 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 CRYBG3Q68DQ2 2970 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 KRTAP8-1Q8IUC2 63 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 TTC28Q96AY4 2481 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 SMR3AQ99954 134 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 VPS13DQ5THJ4 4388 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 CHD8Q9HCK8 2581 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 TENM2Q9NT68 2774 aa0.68□□□□□ -2.3
CFTR-207ENST00000546407 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms