RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 Q6JHZ5 121 aa12.21□□□□□ -0.45
CHD4-214ENST00000545942 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
CHD4-214ENST00000545942 S100A1P23297 94 aa12.18□□□□□ -0.46
CHD4-214ENST00000545942 RPL37P61927 97 aaKnown RBP12.18□□□□□ -0.46
CHD4-214ENST00000545942 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
CHD4-214ENST00000545942 C12orf57Q99622 126 aa12.18□□□□□ -0.46
CHD4-214ENST00000545942 SCGB1D1O95968 90 aa12.17□□□□□ -0.46
CHD4-214ENST00000545942 BVES-AS1Q5T3Y7 98 aa12.17□□□□□ -0.46
CHD4-214ENST00000545942 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
CHD4-214ENST00000545942 OCIAD2Q56VL3 154 aa12.15□□□□□ -0.46
CHD4-214ENST00000545942 IGFL1Q6UW32 110 aa12.15□□□□□ -0.46
CHD4-214ENST00000545942 TRBV7-7A0A0K0K1E9 115 aa12.14□□□□□ -0.47
CHD4-214ENST00000545942 COX8AP10176 69 aa12.14□□□□□ -0.47
CHD4-214ENST00000545942 MT1HP80294 61 aa12.14□□□□□ -0.47
CHD4-214ENST00000545942 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
CHD4-214ENST00000545942 PPDPFLQ8WWR9 84 aa12.13□□□□□ -0.47
CHD4-214ENST00000545942 SNHG12Q9BXW3 62 aa12.11□□□□□ -0.47
CHD4-214ENST00000545942 DLEU1O43261 78 aa12.1□□□□□ -0.47
CHD4-214ENST00000545942 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
CHD4-214ENST00000545942 CFC1P0CG37 223 aa12.05□□□□□ -0.48
CHD4-214ENST00000545942 RAB37Q96AX2 223 aa12.04□□□□□ -0.48
CHD4-214ENST00000545942 H3BUT2 72 aa12.03□□□□□ -0.48
CHD4-214ENST00000545942 SNCGO76070 127 aa12.03□□□□□ -0.48
CHD4-214ENST00000545942 C14orf144Q96I85 54 aa12.03□□□□□ -0.48
CHD4-214ENST00000545942 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
CHD4-214ENST00000545942 A0A0B4J2C4 111 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 H0YGX0 51 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 LST1O00453 97 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 PAM16Q9Y3D7 125 aa11.99□□□□□ -0.49
CHD4-214ENST00000545942 SPATA45Q537H7 98 aa11.97□□□□□ -0.49
CHD4-214ENST00000545942 Q6Q795 121 aa11.95□□□□□ -0.5
CHD4-214ENST00000545942 Q75L30 129 aa11.95□□□□□ -0.5
CHD4-214ENST00000545942 FAM218AQ96MZ4 157 aa11.95□□□□□ -0.5
CHD4-214ENST00000545942 SS18L2Q9UHA2 77 aa11.95□□□□□ -0.5
CHD4-214ENST00000545942 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
CHD4-214ENST00000545942 M0R2T5 61 aa11.93□□□□□ -0.5
CHD4-214ENST00000545942 LORP23490 312 aaPredicted RBP11.93□□□□□ -0.5
CHD4-214ENST00000545942 NDUFV3P56181 108 aaKnown RBP11.93□□□□□ -0.5
CHD4-214ENST00000545942 KRTAP10-6P60371 365 aaPredicted RBP11.93□□□□□ -0.5
CHD4-214ENST00000545942 C2orf91Q6ZV80 131 aa11.93□□□□□ -0.5
CHD4-214ENST00000545942 VAMP8Q9BV40 100 aa11.93□□□□□ -0.5
CHD4-214ENST00000545942 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
CHD4-214ENST00000545942 CEND1Q8N111 149 aa11.9□□□□□ -0.5
CHD4-214ENST00000545942 CRCT1Q9UGL9 99 aa11.89□□□□□ -0.51
CHD4-214ENST00000545942 FSIP2Q5CZC0 6907 aa11.89□□□□□ -0.51
CHD4-214ENST00000545942 TMEM238LA0A1B0GVL6 79 aa11.88□□□□□ -0.51
CHD4-214ENST00000545942 A0A1B0GX51 115 aa11.88□□□□□ -0.51
CHD4-214ENST00000545942 A6NJY4 79 aa11.88□□□□□ -0.51
CHD4-214ENST00000545942 GHRHP01286 108 aa11.88□□□□□ -0.51
CHD4-214ENST00000545942 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
CHD4-214ENST00000545942 Q96NJ1 140 aa11.87□□□□□ -0.51
CHD4-214ENST00000545942 A0A087WSZ3 146 aa11.86□□□□□ -0.51
CHD4-214ENST00000545942 H3BMG7 143 aa11.86□□□□□ -0.51
CHD4-214ENST00000545942 FABP2P12104 132 aa11.85□□□□□ -0.51
CHD4-214ENST00000545942 FXYD2P54710 66 aa11.82□□□□□ -0.52
CHD4-214ENST00000545942 FLGP20930 4061 aaPredicted RBP11.81□□□□□ -0.52
CHD4-214ENST00000545942 C20orf166-AS1Q96NR2 134 aa11.81□□□□□ -0.52
CHD4-214ENST00000545942 TRIAP1O43715 76 aa11.8□□□□□ -0.52
CHD4-214ENST00000545942 A8MUU9 505 aa11.77□□□□□ -0.53
CHD4-214ENST00000545942 A0A1W2PNM2 257 aa11.75□□□□□ -0.53
CHD4-214ENST00000545942 DNAL4O96015 105 aa11.73□□□□□ -0.53
CHD4-214ENST00000545942 SIGMAR1Q99720 223 aa11.71□□□□□ -0.53
CHD4-214ENST00000545942 ORMDL1Q9P0S3 153 aa11.71□□□□□ -0.53
CHD4-214ENST00000545942 H3BQ85 93 aa11.7□□□□□ -0.54
CHD4-214ENST00000545942 HSD52Q0P140 79 aa11.7□□□□□ -0.54
CHD4-214ENST00000545942 ANKRD29Q8N6D5 301 aa11.7□□□□□ -0.54
CHD4-214ENST00000545942 TRBV7-4A0A0J9YYF1 115 aa11.69□□□□□ -0.54
CHD4-214ENST00000545942 PSMB2P49721 201 aa11.69□□□□□ -0.54
CHD4-214ENST00000545942 DSCR10P59022 87 aa11.69□□□□□ -0.54
CHD4-214ENST00000545942 K7ERJ3 54 aa11.67□□□□□ -0.54
CHD4-214ENST00000545942 COX6CP09669 75 aa11.67□□□□□ -0.54
CHD4-214ENST00000545942 PYY3Q5JQD4 70 aa11.67□□□□□ -0.54
CHD4-214ENST00000545942 A0A1B0GV72 72 aa11.66□□□□□ -0.54
CHD4-214ENST00000545942 TMEM256-PLSCR3K7ERE1 68 aa11.65□□□□□ -0.54
CHD4-214ENST00000545942 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
CHD4-214ENST00000545942 IGKV4-1P06312 121 aa11.64□□□□□ -0.55
CHD4-214ENST00000545942 LINC00313P59037 77 aa11.63□□□□□ -0.55
CHD4-214ENST00000545942 CCKP06307 115 aa11.6□□□□□ -0.55
CHD4-214ENST00000545942 TRACP01848 142 aa11.59□□□□□ -0.55
CHD4-214ENST00000545942 KRTAP16-1A8MUX0 517 aa11.58□□□□□ -0.56
CHD4-214ENST00000545942 UBE2V1Q13404 147 aa11.57□□□□□ -0.56
CHD4-214ENST00000545942 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
CHD4-214ENST00000545942 DEFB116Q30KQ4 102 aa11.56□□□□□ -0.56
CHD4-214ENST00000545942 UQCR10Q9UDW1 63 aa11.56□□□□□ -0.56
CHD4-214ENST00000545942 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
CHD4-214ENST00000545942 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
CHD4-214ENST00000545942 SCGB1C2P0DMR2 95 aa11.49□□□□□ -0.57
CHD4-214ENST00000545942 VPS25Q9BRG1 176 aa11.49□□□□□ -0.57
CHD4-214ENST00000545942 RBM3P98179 157 aaKnown RBP11.48□□□□□ -0.57
CHD4-214ENST00000545942 DSCR8Q96T75 97 aa11.46□□□□□ -0.57
CHD4-214ENST00000545942 KRTAP9-8Q9BYQ0 159 aa11.46□□□□□ -0.57
CHD4-214ENST00000545942 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
CHD4-214ENST00000545942 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
CHD4-214ENST00000545942 TMA7Q9Y2S6 64 aaKnown RBP11.44□□□□□ -0.58
CHD4-214ENST00000545942 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
CHD4-214ENST00000545942 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
CHD4-214ENST00000545942 RBM12B-AS1Q9P1G2 102 aa11.41□□□□□ -0.58
CHD4-214ENST00000545942 HRES1P13985 223 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms