RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
CLSTN3-216ENST00000545663 B5MCH6 92 aa8.33□□□□□ -1.08
CLSTN3-216ENST00000545663 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
CLSTN3-216ENST00000545663 DHRS4-AS1Q9P1J3 65 aa8.33□□□□□ -1.08
CLSTN3-216ENST00000545663 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
CLSTN3-216ENST00000545663 SPINK1P00995 79 aa8.32□□□□□ -1.08
CLSTN3-216ENST00000545663 COX7BP24311 80 aa8.32□□□□□ -1.08
CLSTN3-216ENST00000545663 FXYD2P54710 66 aa8.32□□□□□ -1.08
CLSTN3-216ENST00000545663 BVES-AS1Q5T3Y7 98 aa8.32□□□□□ -1.08
CLSTN3-216ENST00000545663 NHP2Q9NX24 153 aaKnown RBP8.32□□□□□ -1.08
CLSTN3-216ENST00000545663 SNCGO76070 127 aa8.31□□□□□ -1.08
CLSTN3-216ENST00000545663 ELOF1P60002 83 aaKnown RBP8.31□□□□□ -1.08
CLSTN3-216ENST00000545663 Q8N377 158 aa8.31□□□□□ -1.08
CLSTN3-216ENST00000545663 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
CLSTN3-216ENST00000545663 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
CLSTN3-216ENST00000545663 SLC25A20O43772 301 aa8.29□□□□□ -1.08
CLSTN3-216ENST00000545663 Q1RN00 199 aa8.29□□□□□ -1.08
CLSTN3-216ENST00000545663 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
CLSTN3-216ENST00000545663 H0YGX0 51 aa8.27□□□□□ -1.09
CLSTN3-216ENST00000545663 SMCR5Q8TEV8 140 aa8.27□□□□□ -1.09
CLSTN3-216ENST00000545663 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
CLSTN3-216ENST00000545663 H7C2G1 150 aa8.26□□□□□ -1.09
CLSTN3-216ENST00000545663 COX6CP09669 75 aa8.26□□□□□ -1.09
CLSTN3-216ENST00000545663 NEBP20929 6669 aa8.26□□□□□ -1.09
CLSTN3-216ENST00000545663 Q9BRP9 147 aa8.25□□□□□ -1.09
CLSTN3-216ENST00000545663 LCE2BO14633 110 aa8.24□□□□□ -1.09
CLSTN3-216ENST00000545663 GHRHP01286 108 aa8.23□□□□□ -1.09
CLSTN3-216ENST00000545663 PSMB2P49721 201 aa8.22□□□□□ -1.09
CLSTN3-216ENST00000545663 A0A1B0GX51 115 aa8.21□□□□□ -1.1
CLSTN3-216ENST00000545663 C9orf92A6NGG3 77 aa8.21□□□□□ -1.1
CLSTN3-216ENST00000545663 LINC00575Q6W349 94 aa8.21□□□□□ -1.1
CLSTN3-216ENST00000545663 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
CLSTN3-216ENST00000545663 KRTAP6-3Q3LI67 103 aa8.2□□□□□ -1.1
CLSTN3-216ENST00000545663 K7ERJ3 54 aa8.19□□□□□ -1.1
CLSTN3-216ENST00000545663 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
CLSTN3-216ENST00000545663 ERC2-IT1O76042 136 aa8.18□□□□□ -1.1
CLSTN3-216ENST00000545663 OCIAD2Q56VL3 154 aa8.18□□□□□ -1.1
CLSTN3-216ENST00000545663 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 TRIAP1O43715 76 aa8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 GAGE2AQ6NT46 116 aa8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 PPDPFLQ8WWR9 84 aa8.17□□□□□ -1.1
CLSTN3-216ENST00000545663 H3BQ85 93 aa8.16□□□□□ -1.1
CLSTN3-216ENST00000545663 SCGB1C2P0DMR2 95 aa8.16□□□□□ -1.1
CLSTN3-216ENST00000545663 SPRR1BP22528 89 aa8.16□□□□□ -1.1
CLSTN3-216ENST00000545663 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
CLSTN3-216ENST00000545663 BATFQ16520 125 aa8.16□□□□□ -1.1
CLSTN3-216ENST00000545663 LAMTOR3Q9UHA4 124 aa8.15□□□□□ -1.1
CLSTN3-216ENST00000545663 IGLV5-48A0A075B6I7 105 aa8.14□□□□□ -1.11
CLSTN3-216ENST00000545663 DNAL4O96015 105 aa8.13□□□□□ -1.11
CLSTN3-216ENST00000545663 MOBPQ13875 183 aa8.13□□□□□ -1.11
CLSTN3-216ENST00000545663 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
CLSTN3-216ENST00000545663 Q6ZQY7 126 aa8.12□□□□□ -1.11
CLSTN3-216ENST00000545663 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
CLSTN3-216ENST00000545663 Q6Q795 121 aa8.11□□□□□ -1.11
CLSTN3-216ENST00000545663 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
CLSTN3-216ENST00000545663 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
CLSTN3-216ENST00000545663 TRACP01848 142 aa8.1□□□□□ -1.11
CLSTN3-216ENST00000545663 F8WEM9 126 aa8.09□□□□□ -1.11
CLSTN3-216ENST00000545663 COL5A1-AS1Q5SY13 56 aa8.09□□□□□ -1.11
CLSTN3-216ENST00000545663 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
CLSTN3-216ENST00000545663 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 LST1O00453 97 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 MT2AP02795 61 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 CLEC2BQ92478 149 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 FAM218AQ96MZ4 157 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 SNHG12Q9BXW3 62 aa8.07□□□□□ -1.12
CLSTN3-216ENST00000545663 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
CLSTN3-216ENST00000545663 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
CLSTN3-216ENST00000545663 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
CLSTN3-216ENST00000545663 TMEM256-PLSCR3K7ERE1 68 aa8.05□□□□□ -1.12
CLSTN3-216ENST00000545663 H3BUT2 72 aa8.04□□□□□ -1.12
CLSTN3-216ENST00000545663 FABP2P12104 132 aa8.04□□□□□ -1.12
CLSTN3-216ENST00000545663 KRTAP9-3Q9BYQ3 159 aa8.04□□□□□ -1.12
CLSTN3-216ENST00000545663 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
CLSTN3-216ENST00000545663 KRTAP20-1Q3LI63 56 aa8.03□□□□□ -1.12
CLSTN3-216ENST00000545663 Q6JHZ5 121 aa8.03□□□□□ -1.12
CLSTN3-216ENST00000545663 MT1FP04733 61 aa8.02□□□□□ -1.13
CLSTN3-216ENST00000545663 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
CLSTN3-216ENST00000545663 SMIM29Q86T20 159 aa8.02□□□□□ -1.13
CLSTN3-216ENST00000545663 A0A1W2PPM0 123 aa8.01□□□□□ -1.13
CLSTN3-216ENST00000545663 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
CLSTN3-216ENST00000545663 TCL1BO95988 128 aa7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 NDUFV3P56181 108 aaKnown RBP7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 CD164Q04900 197 aa7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 UBE2V1Q13404 147 aa7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 NAA38Q9BRA0 125 aaKnown RBP7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
CLSTN3-216ENST00000545663 LINC00846Q9NV44 126 aa7.97□□□□□ -1.13
CLSTN3-216ENST00000545663 BAALC-AS2P0C853 105 aa7.96□□□□□ -1.14
CLSTN3-216ENST00000545663 H3BMG7 143 aa7.95□□□□□ -1.14
CLSTN3-216ENST00000545663 LIMD2Q9BT23 127 aa7.94□□□□□ -1.14
CLSTN3-216ENST00000545663 SPCS1Q9Y6A9 102 aa7.94□□□□□ -1.14
CLSTN3-216ENST00000545663 ANKRD29Q8N6D5 301 aa7.93□□□□□ -1.14
CLSTN3-216ENST00000545663 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
CLSTN3-216ENST00000545663 C9JAW5 83 aa7.91□□□□□ -1.14
CLSTN3-216ENST00000545663 JMJD7-PLA2G4BH0Y9G9 81 aa7.91□□□□□ -1.14
CLSTN3-216ENST00000545663 H3BT86 120 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms