RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 WIPF1O43516 503 aa5.55□□□□□ -1.52
CCDC7-210ENST00000545067 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
CCDC7-210ENST00000545067 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
CCDC7-210ENST00000545067 OXTP01178 125 aa5.53□□□□□ -1.52
CCDC7-210ENST00000545067 KRTAP1-5Q9BYS1 174 aa5.53□□□□□ -1.52
CCDC7-210ENST00000545067 H0Y9P7 68 aa5.53□□□□□ -1.52
CCDC7-210ENST00000545067 BCE1O60756 84 aa5.53□□□□□ -1.52
CCDC7-210ENST00000545067 CIRBP-AS1Q8TBR5 109 aa5.53□□□□□ -1.52
CCDC7-210ENST00000545067 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
CCDC7-210ENST00000545067 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
CCDC7-210ENST00000545067 IGLV5-48A0A075B6I7 105 aa5.52□□□□□ -1.53
CCDC7-210ENST00000545067 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
CCDC7-210ENST00000545067 NBDYA0A0U1RRE5 68 aa5.51□□□□□ -1.53
CCDC7-210ENST00000545067 MOBPQ13875 183 aa5.51□□□□□ -1.53
CCDC7-210ENST00000545067 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
CCDC7-210ENST00000545067 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
CCDC7-210ENST00000545067 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
CCDC7-210ENST00000545067 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
CCDC7-210ENST00000545067 IGLV5-52A0A0A0MRZ9 124 aa5.49□□□□□ -1.53
CCDC7-210ENST00000545067 DSCR10P59022 87 aa5.49□□□□□ -1.53
CCDC7-210ENST00000545067 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
CCDC7-210ENST00000545067 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
CCDC7-210ENST00000545067 LINC00336Q6ZUF6 198 aa5.48□□□□□ -1.53
CCDC7-210ENST00000545067 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
CCDC7-210ENST00000545067 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
CCDC7-210ENST00000545067 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.54
CCDC7-210ENST00000545067 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 CHKB-CPT1BH3BT56 60 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 RTL8CO15255 209 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 SPRR1AP35321 89 aa5.45□□□□□ -1.54
CCDC7-210ENST00000545067 TGP01266 2768 aa5.44□□□□□ -1.54
CCDC7-210ENST00000545067 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
CCDC7-210ENST00000545067 A0A1B0GW54 56 aa5.44□□□□□ -1.54
CCDC7-210ENST00000545067 C1orf134Q5TEV5 83 aa5.44□□□□□ -1.54
CCDC7-210ENST00000545067 ZNF706Q9Y5V0 76 aaPredicted RBP5.44□□□□□ -1.54
CCDC7-210ENST00000545067 FAM229BQ4G0N7 80 aa5.43□□□□□ -1.54
CCDC7-210ENST00000545067 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
CCDC7-210ENST00000545067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.43□□□□□ -1.54
CCDC7-210ENST00000545067 Q5XG85 94 aa5.43□□□□□ -1.54
CCDC7-210ENST00000545067 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
CCDC7-210ENST00000545067 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
CCDC7-210ENST00000545067 PRR15Q8IV56 129 aa5.42□□□□□ -1.54
CCDC7-210ENST00000545067 A8MWP4 228 aa5.42□□□□□ -1.54
CCDC7-210ENST00000545067 KRTAP4-16G5E9R7 235 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-210ENST00000545067 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
CCDC7-210ENST00000545067 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
CCDC7-210ENST00000545067 A6NED7 52 aa5.41□□□□□ -1.54
CCDC7-210ENST00000545067 PANO1I0J062 215 aa5.41□□□□□ -1.54
CCDC7-210ENST00000545067 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
CCDC7-210ENST00000545067 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
CCDC7-210ENST00000545067 TRAV22A0A0B4J277 110 aa5.4□□□□□ -1.54
CCDC7-210ENST00000545067 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
CCDC7-210ENST00000545067 CSMD3Q7Z407 3707 aa5.4□□□□□ -1.55
CCDC7-210ENST00000545067 A0A087WTM6 91 aa5.39□□□□□ -1.55
CCDC7-210ENST00000545067 A8MUN3 132 aa5.39□□□□□ -1.55
CCDC7-210ENST00000545067 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
CCDC7-210ENST00000545067 TNP2Q05952 138 aa5.39□□□□□ -1.55
CCDC7-210ENST00000545067 C1orf195Q5TG92 126 aa5.39□□□□□ -1.55
CCDC7-210ENST00000545067 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
CCDC7-210ENST00000545067 SPACA4Q8TDM5 124 aa5.35□□□□□ -1.55
CCDC7-210ENST00000545067 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
CCDC7-210ENST00000545067 PMAIP1Q13794 54 aa5.34□□□□□ -1.55
CCDC7-210ENST00000545067 V9GYY9 64 aa5.34□□□□□ -1.55
CCDC7-210ENST00000545067 C8orf17Q9NRJ1 99 aa5.34□□□□□ -1.55
CCDC7-210ENST00000545067 ZNF861PO60384 105 aa5.33□□□□□ -1.56
CCDC7-210ENST00000545067 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
CCDC7-210ENST00000545067 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
CCDC7-210ENST00000545067 SPINK1P00995 79 aa5.31□□□□□ -1.56
CCDC7-210ENST00000545067 COA5Q86WW8 74 aa5.31□□□□□ -1.56
CCDC7-210ENST00000545067 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
CCDC7-210ENST00000545067 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
CCDC7-210ENST00000545067 LINC00472Q9H8W2 130 aa5.3□□□□□ -1.56
CCDC7-210ENST00000545067 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
CCDC7-210ENST00000545067 MMP24-AS1A0A0U1RRL7 71 aa5.28□□□□□ -1.56
CCDC7-210ENST00000545067 H3BPC8 53 aa5.27□□□□□ -1.57
CCDC7-210ENST00000545067 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
CCDC7-210ENST00000545067 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
CCDC7-210ENST00000545067 LIMD2Q9BT23 127 aa5.26□□□□□ -1.57
CCDC7-210ENST00000545067 LINC00313P59037 77 aa5.26□□□□□ -1.57
CCDC7-210ENST00000545067 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
CCDC7-210ENST00000545067 SPRR1BP22528 89 aa5.24□□□□□ -1.57
CCDC7-210ENST00000545067 PRR26Q8N8Z3 221 aa5.24□□□□□ -1.57
CCDC7-210ENST00000545067 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
CCDC7-210ENST00000545067 A0A087X002 238 aa5.24□□□□□ -1.57
CCDC7-210ENST00000545067 NOTCH2NLQ7Z3S9 236 aa5.24□□□□□ -1.57
CCDC7-210ENST00000545067 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
CCDC7-210ENST00000545067 KRTAP29-1A8MX34 341 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-210ENST00000545067 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
CCDC7-210ENST00000545067 CD164Q04900 197 aa5.21□□□□□ -1.58
CCDC7-210ENST00000545067 TYMSOSQ8TAI1 123 aa5.21□□□□□ -1.58
CCDC7-210ENST00000545067 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.58
CCDC7-210ENST00000545067 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-210ENST00000545067 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.58
CCDC7-210ENST00000545067 Q6ZRN7 208 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-210ENST00000545067 KRTAP10-2P60368 255 aa5.2□□□□□ -1.58
CCDC7-210ENST00000545067 Q96NJ1 140 aa5.2□□□□□ -1.58
CCDC7-210ENST00000545067 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-210ENST00000545067 LOC101927531A0A1B0GV80 90 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms