RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 A6NJY4 79 aa6.61□□□□□ -1.35
HDAC4-216ENST00000544989 Q5XG85 94 aa6.61□□□□□ -1.35
HDAC4-216ENST00000544989 HRCT1Q6UXD1 115 aa6.61□□□□□ -1.35
HDAC4-216ENST00000544989 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
HDAC4-216ENST00000544989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.6□□□□□ -1.35
HDAC4-216ENST00000544989 Q6ZQY7 126 aa6.6□□□□□ -1.35
HDAC4-216ENST00000544989 C12orf57Q99622 126 aa6.6□□□□□ -1.35
HDAC4-216ENST00000544989 A0A0B4J2C4 111 aa6.59□□□□□ -1.35
HDAC4-216ENST00000544989 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
HDAC4-216ENST00000544989 Q6JHZ5 121 aa6.59□□□□□ -1.35
HDAC4-216ENST00000544989 H0YGX0 51 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 CFC1P0CG37 223 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 OCIAD2Q56VL3 154 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
HDAC4-216ENST00000544989 TCL1BO95988 128 aa6.57□□□□□ -1.36
HDAC4-216ENST00000544989 GHRHP01286 108 aa6.57□□□□□ -1.36
HDAC4-216ENST00000544989 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
HDAC4-216ENST00000544989 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
HDAC4-216ENST00000544989 CEND1Q8N111 149 aa6.56□□□□□ -1.36
HDAC4-216ENST00000544989 IGLV8-61A0A075B6I0 122 aa6.55□□□□□ -1.36
HDAC4-216ENST00000544989 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
HDAC4-216ENST00000544989 XP32Q5T750 250 aa6.54□□□□□ -1.36
HDAC4-216ENST00000544989 CLEC2BQ92478 149 aa6.54□□□□□ -1.36
HDAC4-216ENST00000544989 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
HDAC4-216ENST00000544989 A0A1B0GX51 115 aa6.53□□□□□ -1.36
HDAC4-216ENST00000544989 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
HDAC4-216ENST00000544989 HSD52Q0P140 79 aa6.51□□□□□ -1.37
HDAC4-216ENST00000544989 C1orf195Q5TG92 126 aa6.51□□□□□ -1.37
HDAC4-216ENST00000544989 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
HDAC4-216ENST00000544989 H3BQ85 93 aa6.49□□□□□ -1.37
HDAC4-216ENST00000544989 IGFL1Q6UW32 110 aa6.49□□□□□ -1.37
HDAC4-216ENST00000544989 A0A0G2JQZ4 141 aa6.48□□□□□ -1.37
HDAC4-216ENST00000544989 FXYD2P54710 66 aa6.48□□□□□ -1.37
HDAC4-216ENST00000544989 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
HDAC4-216ENST00000544989 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
HDAC4-216ENST00000544989 COX6CP09669 75 aa6.47□□□□□ -1.37
HDAC4-216ENST00000544989 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
HDAC4-216ENST00000544989 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
HDAC4-216ENST00000544989 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
HDAC4-216ENST00000544989 TRIAP1O43715 76 aa6.45□□□□□ -1.38
HDAC4-216ENST00000544989 DNAL4O96015 105 aa6.45□□□□□ -1.38
HDAC4-216ENST00000544989 NDUFV3P56181 108 aaKnown RBP6.45□□□□□ -1.38
HDAC4-216ENST00000544989 Q6Q795 121 aa6.45□□□□□ -1.38
HDAC4-216ENST00000544989 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
HDAC4-216ENST00000544989 PSMB2P49721 201 aa6.44□□□□□ -1.38
HDAC4-216ENST00000544989 H3BUT2 72 aa6.43□□□□□ -1.38
HDAC4-216ENST00000544989 TEN1Q86WV5 123 aa6.43□□□□□ -1.38
HDAC4-216ENST00000544989 LST1O00453 97 aa6.42□□□□□ -1.38
HDAC4-216ENST00000544989 FABP2P12104 132 aa6.42□□□□□ -1.38
HDAC4-216ENST00000544989 ORMDL1Q9P0S3 153 aa6.42□□□□□ -1.38
HDAC4-216ENST00000544989 H3BMG7 143 aa6.41□□□□□ -1.38
HDAC4-216ENST00000544989 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
HDAC4-216ENST00000544989 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
HDAC4-216ENST00000544989 PCP4L1A6NKN8 68 aa6.39□□□□□ -1.39
HDAC4-216ENST00000544989 K7ERJ3 54 aa6.39□□□□□ -1.39
HDAC4-216ENST00000544989 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
HDAC4-216ENST00000544989 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
HDAC4-216ENST00000544989 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
HDAC4-216ENST00000544989 TRACP01848 142 aa6.36□□□□□ -1.39
HDAC4-216ENST00000544989 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
HDAC4-216ENST00000544989 ANKRD29Q8N6D5 301 aa6.36□□□□□ -1.39
HDAC4-216ENST00000544989 A0A087WSZ3 146 aa6.35□□□□□ -1.39
HDAC4-216ENST00000544989 M0R143 59 aa6.35□□□□□ -1.39
HDAC4-216ENST00000544989 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.39
HDAC4-216ENST00000544989 UBE2V1Q13404 147 aa6.34□□□□□ -1.39
HDAC4-216ENST00000544989 Q75L30 129 aa6.32□□□□□ -1.4
HDAC4-216ENST00000544989 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
HDAC4-216ENST00000544989 A0A1W2PNM2 257 aa6.31□□□□□ -1.4
HDAC4-216ENST00000544989 ATP11AUNQ6ZP68 121 aa6.31□□□□□ -1.4
HDAC4-216ENST00000544989 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
HDAC4-216ENST00000544989 CCKP06307 115 aa6.28□□□□□ -1.4
HDAC4-216ENST00000544989 RBM3P98179 157 aaKnown RBP6.28□□□□□ -1.4
HDAC4-216ENST00000544989 Q96NJ1 140 aa6.28□□□□□ -1.4
HDAC4-216ENST00000544989 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
HDAC4-216ENST00000544989 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
HDAC4-216ENST00000544989 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
HDAC4-216ENST00000544989 ATXN8Q156A1 80 aa6.26□□□□□ -1.41
HDAC4-216ENST00000544989 SIGMAR1Q99720 223 aa6.26□□□□□ -1.41
HDAC4-216ENST00000544989 A0A1B0GV72 72 aa6.25□□□□□ -1.41
HDAC4-216ENST00000544989 BAALC-AS2P0C853 105 aa6.25□□□□□ -1.41
HDAC4-216ENST00000544989 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
HDAC4-216ENST00000544989 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
HDAC4-216ENST00000544989 C9JAW5 83 aa6.23□□□□□ -1.41
HDAC4-216ENST00000544989 A8MUU9 505 aa6.22□□□□□ -1.41
HDAC4-216ENST00000544989 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
HDAC4-216ENST00000544989 LINC00313P59037 77 aa6.22□□□□□ -1.41
HDAC4-216ENST00000544989 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
HDAC4-216ENST00000544989 VPS25Q9BRG1 176 aa6.22□□□□□ -1.41
HDAC4-216ENST00000544989 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 A0A1B0GW54 56 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 PDE6GP18545 87 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 KRTAP19-2Q3LHN2 52 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
HDAC4-216ENST00000544989 J3KT08 172 aa6.19□□□□□ -1.42
HDAC4-216ENST00000544989 DSCR10P59022 87 aa6.19□□□□□ -1.42
HDAC4-216ENST00000544989 C8orf87E5RJ46 101 aa6.17□□□□□ -1.42
HDAC4-216ENST00000544989 MT1HP80294 61 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms