RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 BVES-AS1Q5T3Y7 98 aa6.34□□□□□ -1.39
YBX3-216ENST00000544622 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
YBX3-216ENST00000544622 Q6ZQY7 126 aa6.34□□□□□ -1.39
YBX3-216ENST00000544622 A0A0B4J2C4 111 aa6.33□□□□□ -1.4
YBX3-216ENST00000544622 CEND1Q8N111 149 aa6.33□□□□□ -1.4
YBX3-216ENST00000544622 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
YBX3-216ENST00000544622 A0A0G2JQZ4 141 aa6.32□□□□□ -1.4
YBX3-216ENST00000544622 IGLV8-61A0A075B6I0 122 aa6.31□□□□□ -1.4
YBX3-216ENST00000544622 H7C2G1 150 aa6.31□□□□□ -1.4
YBX3-216ENST00000544622 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
YBX3-216ENST00000544622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.31□□□□□ -1.4
YBX3-216ENST00000544622 XP32Q5T750 250 aa6.3□□□□□ -1.4
YBX3-216ENST00000544622 PPDPFLQ8WWR9 84 aa6.3□□□□□ -1.4
YBX3-216ENST00000544622 FXYD2P54710 66 aa6.29□□□□□ -1.4
YBX3-216ENST00000544622 RAB37Q96AX2 223 aa6.29□□□□□ -1.4
YBX3-216ENST00000544622 H0YGX0 51 aa6.28□□□□□ -1.4
YBX3-216ENST00000544622 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
YBX3-216ENST00000544622 FAM218AQ96MZ4 157 aa6.28□□□□□ -1.4
YBX3-216ENST00000544622 OCIAD2Q56VL3 154 aa6.27□□□□□ -1.41
YBX3-216ENST00000544622 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
YBX3-216ENST00000544622 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
YBX3-216ENST00000544622 Q6JHZ5 121 aa6.26□□□□□ -1.41
YBX3-216ENST00000544622 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
YBX3-216ENST00000544622 F8WEM9 126 aa6.25□□□□□ -1.41
YBX3-216ENST00000544622 LCE2AQ5TA79 106 aaPredicted RBP6.25□□□□□ -1.41
YBX3-216ENST00000544622 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
YBX3-216ENST00000544622 A0A0U1RQV1 116 aa6.24□□□□□ -1.41
YBX3-216ENST00000544622 A0A1B0GX51 115 aa6.24□□□□□ -1.41
YBX3-216ENST00000544622 HSD52Q0P140 79 aa6.24□□□□□ -1.41
YBX3-216ENST00000544622 CLEC2BQ92478 149 aa6.24□□□□□ -1.41
YBX3-216ENST00000544622 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
YBX3-216ENST00000544622 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
YBX3-216ENST00000544622 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
YBX3-216ENST00000544622 TRIAP1O43715 76 aa6.22□□□□□ -1.41
YBX3-216ENST00000544622 TCL1BO95988 128 aa6.22□□□□□ -1.41
YBX3-216ENST00000544622 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
YBX3-216ENST00000544622 SNCGO76070 127 aa6.21□□□□□ -1.42
YBX3-216ENST00000544622 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
YBX3-216ENST00000544622 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
YBX3-216ENST00000544622 H3BUT2 72 aa6.19□□□□□ -1.42
YBX3-216ENST00000544622 K7ERJ3 54 aa6.19□□□□□ -1.42
YBX3-216ENST00000544622 NDUFV3P56181 108 aaKnown RBP6.19□□□□□ -1.42
YBX3-216ENST00000544622 Q6Q795 121 aa6.19□□□□□ -1.42
YBX3-216ENST00000544622 GHRHP01286 108 aa6.17□□□□□ -1.42
YBX3-216ENST00000544622 TEN1Q86WV5 123 aa6.15□□□□□ -1.42
YBX3-216ENST00000544622 H3BMG7 143 aa6.14□□□□□ -1.43
YBX3-216ENST00000544622 COX6CP09669 75 aa6.14□□□□□ -1.43
YBX3-216ENST00000544622 FABP2P12104 132 aa6.13□□□□□ -1.43
YBX3-216ENST00000544622 PCOTHQ58A44 107 aa6.13□□□□□ -1.43
YBX3-216ENST00000544622 H3BQ85 93 aa6.12□□□□□ -1.43
YBX3-216ENST00000544622 PSMB2P49721 201 aa6.12□□□□□ -1.43
YBX3-216ENST00000544622 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
YBX3-216ENST00000544622 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
YBX3-216ENST00000544622 ORMDL1Q9P0S3 153 aa6.12□□□□□ -1.43
YBX3-216ENST00000544622 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
YBX3-216ENST00000544622 TMEM256-PLSCR3K7ERE1 68 aa6.11□□□□□ -1.43
YBX3-216ENST00000544622 LST1O00453 97 aa6.11□□□□□ -1.43
YBX3-216ENST00000544622 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
YBX3-216ENST00000544622 DNAL4O96015 105 aa6.1□□□□□ -1.43
YBX3-216ENST00000544622 TRACP01848 142 aa6.1□□□□□ -1.43
YBX3-216ENST00000544622 Q96NJ1 140 aa6.1□□□□□ -1.43
YBX3-216ENST00000544622 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
YBX3-216ENST00000544622 A0A087WSZ3 146 aa6.09□□□□□ -1.43
YBX3-216ENST00000544622 SMIM6P0DI80 62 aa6.09□□□□□ -1.43
YBX3-216ENST00000544622 UBE2V1Q13404 147 aa6.08□□□□□ -1.44
YBX3-216ENST00000544622 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
YBX3-216ENST00000544622 ANKRD29Q8N6D5 301 aa6.07□□□□□ -1.44
YBX3-216ENST00000544622 SCGB1C2P0DMR2 95 aa6.05□□□□□ -1.44
YBX3-216ENST00000544622 OBSCN-AS1Q96MR7 158 aa6.05□□□□□ -1.44
YBX3-216ENST00000544622 M0R143 59 aa6.04□□□□□ -1.44
YBX3-216ENST00000544622 Q75L30 129 aa6.04□□□□□ -1.44
YBX3-216ENST00000544622 LOC105371267A0A1B0GV96 52 aa6.03□□□□□ -1.44
YBX3-216ENST00000544622 A0A1B0GV72 72 aa6.01□□□□□ -1.45
YBX3-216ENST00000544622 CCKP06307 115 aa6.01□□□□□ -1.45
YBX3-216ENST00000544622 RBM3P98179 157 aaKnown RBP6.01□□□□□ -1.45
YBX3-216ENST00000544622 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
YBX3-216ENST00000544622 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
YBX3-216ENST00000544622 BAALC-AS2P0C853 105 aa6□□□□□ -1.45
YBX3-216ENST00000544622 A8MUU9 505 aa5.99□□□□□ -1.45
YBX3-216ENST00000544622 TSTD3H0UI37 97 aa5.98□□□□□ -1.45
YBX3-216ENST00000544622 MT1HP80294 61 aa5.98□□□□□ -1.45
YBX3-216ENST00000544622 ATXN8Q156A1 80 aa5.98□□□□□ -1.45
YBX3-216ENST00000544622 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
YBX3-216ENST00000544622 NAA38Q9BRA0 125 aaKnown RBP5.98□□□□□ -1.45
YBX3-216ENST00000544622 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
YBX3-216ENST00000544622 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
YBX3-216ENST00000544622 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
YBX3-216ENST00000544622 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
YBX3-216ENST00000544622 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
YBX3-216ENST00000544622 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
YBX3-216ENST00000544622 DSCR10P59022 87 aa5.95□□□□□ -1.46
YBX3-216ENST00000544622 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
YBX3-216ENST00000544622 C9JAW5 83 aa5.94□□□□□ -1.46
YBX3-216ENST00000544622 LINC00313P59037 77 aa5.94□□□□□ -1.46
YBX3-216ENST00000544622 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
YBX3-216ENST00000544622 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
YBX3-216ENST00000544622 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
YBX3-216ENST00000544622 JMJD7-PLA2G4BH0Y9G9 81 aa5.93□□□□□ -1.46
YBX3-216ENST00000544622 Q6ZQT0 140 aa5.93□□□□□ -1.46
YBX3-216ENST00000544622 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms