RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
TCF4-209ENST00000544241 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
TCF4-209ENST00000544241 IGLV8-61A0A075B6I0 122 aa6.6□□□□□ -1.35
TCF4-209ENST00000544241 CUBNO60494 3623 aa6.59□□□□□ -1.36
TCF4-209ENST00000544241 A8MWP4 228 aa6.59□□□□□ -1.36
TCF4-209ENST00000544241 REG3GQ6UW15 175 aa6.57□□□□□ -1.36
TCF4-209ENST00000544241 MOBPQ13875 183 aa6.56□□□□□ -1.36
TCF4-209ENST00000544241 LINC01556Q5JQF7 62 aa6.56□□□□□ -1.36
TCF4-209ENST00000544241 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
TCF4-209ENST00000544241 MTORP42345 2549 aa6.56□□□□□ -1.36
TCF4-209ENST00000544241 PLAC8Q9NZF1 115 aa6.55□□□□□ -1.36
TCF4-209ENST00000544241 RPL37AP61513 92 aaKnown RBP6.54□□□□□ -1.36
TCF4-209ENST00000544241 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
TCF4-209ENST00000544241 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
TCF4-209ENST00000544241 SPAG11AQ6PDA7 123 aa6.53□□□□□ -1.36
TCF4-209ENST00000544241 FAM168BA1KXE4 195 aa6.52□□□□□ -1.37
TCF4-209ENST00000544241 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
TCF4-209ENST00000544241 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
TCF4-209ENST00000544241 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.37
TCF4-209ENST00000544241 HIVEP2P31629 2446 aa6.5□□□□□ -1.37
TCF4-209ENST00000544241 F8P00451 2351 aa6.5□□□□□ -1.37
TCF4-209ENST00000544241 LINC00472Q9H8W2 130 aa6.5□□□□□ -1.37
TCF4-209ENST00000544241 H0Y9J4 135 aa6.5□□□□□ -1.37
TCF4-209ENST00000544241 MAST4O15021 2626 aa6.49□□□□□ -1.37
TCF4-209ENST00000544241 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
TCF4-209ENST00000544241 ASB16-AS1Q495Z4 193 aa6.49□□□□□ -1.37
TCF4-209ENST00000544241 NF1P21359 2839 aa6.49□□□□□ -1.37
TCF4-209ENST00000544241 KRTAP1-1Q07627 177 aa6.48□□□□□ -1.37
TCF4-209ENST00000544241 SMR3AQ99954 134 aa6.48□□□□□ -1.37
TCF4-209ENST00000544241 TEP1Q99973 2627 aaKnown RBP6.48□□□□□ -1.37
TCF4-209ENST00000544241 A0A0G2JQZ4 141 aa6.47□□□□□ -1.37
TCF4-209ENST00000544241 MMP24-AS1A0A0U1RRL7 71 aa6.47□□□□□ -1.37
TCF4-209ENST00000544241 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
TCF4-209ENST00000544241 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
TCF4-209ENST00000544241 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.37
TCF4-209ENST00000544241 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.37
TCF4-209ENST00000544241 Q6ZR54 194 aa6.46□□□□□ -1.37
TCF4-209ENST00000544241 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.37
TCF4-209ENST00000544241 A0A087X002 238 aa6.46□□□□□ -1.38
TCF4-209ENST00000544241 DEFB131BA0A096LNP1 70 aa6.46□□□□□ -1.38
TCF4-209ENST00000544241 SPINK7P58062 85 aa6.46□□□□□ -1.38
TCF4-209ENST00000544241 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
TCF4-209ENST00000544241 SETD2Q9BYW2 2564 aaPredicted RBP6.45□□□□□ -1.38
TCF4-209ENST00000544241 SPRR1BP22528 89 aa6.45□□□□□ -1.38
TCF4-209ENST00000544241 LINC00313P59037 77 aa6.44□□□□□ -1.38
TCF4-209ENST00000544241 IGKV2-24A0A0C4DH68 120 aa6.43□□□□□ -1.38
TCF4-209ENST00000544241 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
TCF4-209ENST00000544241 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
TCF4-209ENST00000544241 PRLHP81277 87 aa6.43□□□□□ -1.38
TCF4-209ENST00000544241 HRES1P13985 223 aa6.42□□□□□ -1.38
TCF4-209ENST00000544241 PLA2G1BP04054 148 aaKnown RBP6.42□□□□□ -1.38
TCF4-209ENST00000544241 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
TCF4-209ENST00000544241 INAFM1C9JVW0 142 aa6.37□□□□□ -1.39
TCF4-209ENST00000544241 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
TCF4-209ENST00000544241 CDK2AP2O75956 126 aa6.36□□□□□ -1.39
TCF4-209ENST00000544241 ACYP2P14621 99 aa6.36□□□□□ -1.39
TCF4-209ENST00000544241 ATRQ13535 2644 aa6.35□□□□□ -1.39
TCF4-209ENST00000544241 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
TCF4-209ENST00000544241 A0A1B0GVX0 72 aa6.32□□□□□ -1.4
TCF4-209ENST00000544241 A0A096LNI7 61 aa6.32□□□□□ -1.4
TCF4-209ENST00000544241 CASC10Q5T4H9 136 aa6.32□□□□□ -1.4
TCF4-209ENST00000544241 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
TCF4-209ENST00000544241 MDFIQ99750 246 aa6.31□□□□□ -1.4
TCF4-209ENST00000544241 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
TCF4-209ENST00000544241 A0A1B0GU69 56 aa6.3□□□□□ -1.4
TCF4-209ENST00000544241 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
TCF4-209ENST00000544241 Q96NJ1 140 aa6.3□□□□□ -1.4
TCF4-209ENST00000544241 H3BS24 57 aa6.29□□□□□ -1.4
TCF4-209ENST00000544241 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
TCF4-209ENST00000544241 RTL8CO15255 209 aa6.29□□□□□ -1.4
TCF4-209ENST00000544241 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
TCF4-209ENST00000544241 RETNLBQ9BQ08 111 aa6.28□□□□□ -1.4
TCF4-209ENST00000544241 UQCR11O14957 56 aa6.27□□□□□ -1.41
TCF4-209ENST00000544241 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
TCF4-209ENST00000544241 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
TCF4-209ENST00000544241 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
TCF4-209ENST00000544241 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
TCF4-209ENST00000544241 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
TCF4-209ENST00000544241 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
TCF4-209ENST00000544241 STAB1Q9NY15 2570 aa6.23□□□□□ -1.41
TCF4-209ENST00000544241 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
TCF4-209ENST00000544241 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
TCF4-209ENST00000544241 VWFP04275 2813 aa6.21□□□□□ -1.41
TCF4-209ENST00000544241 TRRAPQ9Y4A5 3859 aa6.2□□□□□ -1.42
TCF4-209ENST00000544241 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
TCF4-209ENST00000544241 KRTAP13-1Q8IUC0 172 aa6.19□□□□□ -1.42
TCF4-209ENST00000544241 KRTAP11-1Q8IUC1 163 aa6.18□□□□□ -1.42
TCF4-209ENST00000544241 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
TCF4-209ENST00000544241 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
TCF4-209ENST00000544241 TENM2Q9NT68 2774 aa6.15□□□□□ -1.42
TCF4-209ENST00000544241 CHTF8P0CG12 524 aa6.15□□□□□ -1.43
TCF4-209ENST00000544241 OXLD1Q5BKU9 147 aa6.15□□□□□ -1.43
TCF4-209ENST00000544241 LCE2DQ5TA82 110 aaPredicted RBP6.15□□□□□ -1.43
TCF4-209ENST00000544241 Q5W150 140 aa6.15□□□□□ -1.43
TCF4-209ENST00000544241 CSAG1Q6PB30 78 aa6.15□□□□□ -1.43
TCF4-209ENST00000544241 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
TCF4-209ENST00000544241 KRTAP10-11P60412 298 aa6.14□□□□□ -1.43
TCF4-209ENST00000544241 K7EIL1 84 aa6.14□□□□□ -1.43
TCF4-209ENST00000544241 PKD1L1Q8TDX9 2849 aa6.13□□□□□ -1.43
TCF4-209ENST00000544241 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms