RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 C9orf118A6NHY6 69 aa8.49□□□□□ -1.05
TNFRSF1A-216ENST00000543995 H3BUT2 72 aa8.49□□□□□ -1.05
TNFRSF1A-216ENST00000543995 Q8N377 158 aa8.49□□□□□ -1.05
TNFRSF1A-216ENST00000543995 DNAL4O96015 105 aa8.49□□□□□ -1.05
TNFRSF1A-216ENST00000543995 OCIAD2Q56VL3 154 aa8.47□□□□□ -1.05
TNFRSF1A-216ENST00000543995 SMIM29Q86T20 159 aa8.46□□□□□ -1.05
TNFRSF1A-216ENST00000543995 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.05
TNFRSF1A-216ENST00000543995 Q8NBF4 154 aa8.46□□□□□ -1.05
TNFRSF1A-216ENST00000543995 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.06
TNFRSF1A-216ENST00000543995 GHRHP01286 108 aa8.45□□□□□ -1.06
TNFRSF1A-216ENST00000543995 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
TNFRSF1A-216ENST00000543995 PPDPFLQ8WWR9 84 aa8.45□□□□□ -1.06
TNFRSF1A-216ENST00000543995 F8WEM9 126 aa8.44□□□□□ -1.06
TNFRSF1A-216ENST00000543995 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
TNFRSF1A-216ENST00000543995 LYRM7Q5U5X0 104 aa8.44□□□□□ -1.06
TNFRSF1A-216ENST00000543995 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
TNFRSF1A-216ENST00000543995 LST1O00453 97 aa8.44□□□□□ -1.06
TNFRSF1A-216ENST00000543995 TRACP01848 142 aa8.43□□□□□ -1.06
TNFRSF1A-216ENST00000543995 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
TNFRSF1A-216ENST00000543995 FABP2P12104 132 aa8.42□□□□□ -1.06
TNFRSF1A-216ENST00000543995 TCL1BO95988 128 aa8.41□□□□□ -1.06
TNFRSF1A-216ENST00000543995 ATXN8Q156A1 80 aa8.41□□□□□ -1.06
TNFRSF1A-216ENST00000543995 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
TNFRSF1A-216ENST00000543995 H3BQ85 93 aa8.39□□□□□ -1.07
TNFRSF1A-216ENST00000543995 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
TNFRSF1A-216ENST00000543995 TMEM256-PLSCR3K7ERE1 68 aa8.38□□□□□ -1.07
TNFRSF1A-216ENST00000543995 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
TNFRSF1A-216ENST00000543995 SPINK1P00995 79 aa8.37□□□□□ -1.07
TNFRSF1A-216ENST00000543995 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
TNFRSF1A-216ENST00000543995 SPCS1Q9Y6A9 102 aa8.35□□□□□ -1.07
TNFRSF1A-216ENST00000543995 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
TNFRSF1A-216ENST00000543995 A0A1B0GV90 55 aa8.34□□□□□ -1.07
TNFRSF1A-216ENST00000543995 Q6JHZ5 121 aa8.34□□□□□ -1.07
TNFRSF1A-216ENST00000543995 IGLV8-61A0A075B6I0 122 aa8.34□□□□□ -1.08
TNFRSF1A-216ENST00000543995 H3BMG7 143 aa8.34□□□□□ -1.08
TNFRSF1A-216ENST00000543995 BAALC-AS2P0C853 105 aa8.34□□□□□ -1.08
TNFRSF1A-216ENST00000543995 A0A1B0GV72 72 aa8.32□□□□□ -1.08
TNFRSF1A-216ENST00000543995 UBE2V1Q13404 147 aa8.32□□□□□ -1.08
TNFRSF1A-216ENST00000543995 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
TNFRSF1A-216ENST00000543995 HERC1Q15751 4861 aa8.32□□□□□ -1.08
TNFRSF1A-216ENST00000543995 C9JAW5 83 aa8.31□□□□□ -1.08
TNFRSF1A-216ENST00000543995 CD164Q04900 197 aa8.31□□□□□ -1.08
TNFRSF1A-216ENST00000543995 K7EP34 96 aa8.3□□□□□ -1.08
TNFRSF1A-216ENST00000543995 RPS29P62273 56 aaKnown RBP8.3□□□□□ -1.08
TNFRSF1A-216ENST00000543995 ANKRD29Q8N6D5 301 aa8.29□□□□□ -1.08
TNFRSF1A-216ENST00000543995 RETNLBQ9BQ08 111 aa8.29□□□□□ -1.08
TNFRSF1A-216ENST00000543995 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
TNFRSF1A-216ENST00000543995 MTURNQ8N3F0 131 aa8.28□□□□□ -1.08
TNFRSF1A-216ENST00000543995 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
TNFRSF1A-216ENST00000543995 PRR4Q16378 134 aa8.27□□□□□ -1.09
TNFRSF1A-216ENST00000543995 RBM3P98179 157 aaKnown RBP8.24□□□□□ -1.09
TNFRSF1A-216ENST00000543995 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
TNFRSF1A-216ENST00000543995 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
TNFRSF1A-216ENST00000543995 H3BT86 120 aa8.23□□□□□ -1.09
TNFRSF1A-216ENST00000543995 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
TNFRSF1A-216ENST00000543995 TEN1Q86WV5 123 aa8.23□□□□□ -1.09
TNFRSF1A-216ENST00000543995 DSCR8Q96T75 97 aa8.23□□□□□ -1.09
TNFRSF1A-216ENST00000543995 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
TNFRSF1A-216ENST00000543995 Q6Q795 121 aa8.21□□□□□ -1.1
TNFRSF1A-216ENST00000543995 CCKP06307 115 aa8.19□□□□□ -1.1
TNFRSF1A-216ENST00000543995 Q5XG85 94 aa8.19□□□□□ -1.1
TNFRSF1A-216ENST00000543995 TRBV7-4A0A0J9YYF1 115 aa8.19□□□□□ -1.1
TNFRSF1A-216ENST00000543995 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
TNFRSF1A-216ENST00000543995 IGLV7-46A0A075B6I9 117 aa8.18□□□□□ -1.1
TNFRSF1A-216ENST00000543995 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
TNFRSF1A-216ENST00000543995 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
TNFRSF1A-216ENST00000543995 A0A087WSZ3 146 aa8.16□□□□□ -1.1
TNFRSF1A-216ENST00000543995 F8W1H4 67 aa8.16□□□□□ -1.1
TNFRSF1A-216ENST00000543995 C14orf132Q9NPU4 83 aa8.16□□□□□ -1.1
TNFRSF1A-216ENST00000543995 SS18L2Q9UHA2 77 aa8.15□□□□□ -1.1
TNFRSF1A-216ENST00000543995 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
TNFRSF1A-216ENST00000543995 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
TNFRSF1A-216ENST00000543995 PDE6GP18545 87 aa8.13□□□□□ -1.11
TNFRSF1A-216ENST00000543995 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
TNFRSF1A-216ENST00000543995 C1orf195Q5TG92 126 aa8.13□□□□□ -1.11
TNFRSF1A-216ENST00000543995 LOC110117498A0A087WWA1 95 aa8.12□□□□□ -1.11
TNFRSF1A-216ENST00000543995 Q6ZQT0 140 aa8.12□□□□□ -1.11
TNFRSF1A-216ENST00000543995 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
TNFRSF1A-216ENST00000543995 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
TNFRSF1A-216ENST00000543995 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
TNFRSF1A-216ENST00000543995 CDIP1Q9H305 208 aa8.06□□□□□ -1.12
TNFRSF1A-216ENST00000543995 LPAP08519 4548 aa8.06□□□□□ -1.12
TNFRSF1A-216ENST00000543995 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
TNFRSF1A-216ENST00000543995 A0A1B0GW54 56 aa8.03□□□□□ -1.12
TNFRSF1A-216ENST00000543995 Q96NJ1 140 aa8.03□□□□□ -1.12
TNFRSF1A-216ENST00000543995 C9orf92A6NGG3 77 aa8.01□□□□□ -1.13
TNFRSF1A-216ENST00000543995 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
TNFRSF1A-216ENST00000543995 IGKV4-1P06312 121 aa8□□□□□ -1.13
TNFRSF1A-216ENST00000543995 SIGMAR1Q99720 223 aa8□□□□□ -1.13
TNFRSF1A-216ENST00000543995 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
TNFRSF1A-216ENST00000543995 LRP2P98164 4655 aa7.98□□□□□ -1.13
TNFRSF1A-216ENST00000543995 NREPQ16612 68 aa7.96□□□□□ -1.14
TNFRSF1A-216ENST00000543995 XP32Q5T750 250 aa7.93□□□□□ -1.14
TNFRSF1A-216ENST00000543995 J3KT08 172 aa7.93□□□□□ -1.14
TNFRSF1A-216ENST00000543995 J3QR89 54 aa7.92□□□□□ -1.14
TNFRSF1A-216ENST00000543995 K7ERU9 68 aa7.9□□□□□ -1.14
TNFRSF1A-216ENST00000543995 IGHV6-1A0A0B4J1U7 121 aa7.89□□□□□ -1.15
TNFRSF1A-216ENST00000543995 DSCR10P59022 87 aa7.88□□□□□ -1.15
TNFRSF1A-216ENST00000543995 Q6ZVQ6 151 aa7.88□□□□□ -1.15
TNFRSF1A-216ENST00000543995 NDUFB1O75438 58 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms