RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PRLHP81277 87 aa7.53□□□□□ -1.2
CACNA1C-IT3-201ENST00000542680 Q9BRP9 147 aa7.53□□□□□ -1.2
CACNA1C-IT3-201ENST00000542680 A0A1B0GV90 55 aa7.52□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 SMCR5Q8TEV8 140 aa7.52□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 RPL37AP61513 92 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 H3BMG7 143 aa7.5□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 Q6ZQY7 126 aa7.49□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 ORMDL1Q9P0S3 153 aa7.49□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 ZNF706Q9Y5V0 76 aaPredicted RBP7.49□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 H3BT86 120 aa7.48□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 PLA2G1BP04054 148 aaKnown RBP7.48□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 LINC01600Q96MT4 127 aa7.47□□□□□ -1.21
CACNA1C-IT3-201ENST00000542680 C9JAW5 83 aa7.46□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 F8W1H4 67 aa7.46□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 TMEM256-PLSCR3K7ERE1 68 aa7.46□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 SPRR1BP22528 89 aa7.45□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 SPINK6Q6UWN8 80 aa7.44□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 PRO0461Q9UI25 63 aa7.44□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 BAALC-AS2P0C853 105 aa7.43□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 LINC00483Q53H64 154 aa7.42□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 Q8N377 158 aa7.41□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
CACNA1C-IT3-201ENST00000542680 JMJD7-PLA2G4BH0Y9G9 81 aa7.38□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 FAM229BQ4G0N7 80 aa7.38□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 MTURNQ8N3F0 131 aa7.38□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 MT1HL1P0DM35 61 aa7.37□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 NDUFV3P56181 108 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 LAMTOR3Q9UHA4 124 aa7.37□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 F8WEM9 126 aa7.36□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 TEN1Q86WV5 123 aa7.36□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 C4orf48Q5BLP8 95 aa7.35□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
CACNA1C-IT3-201ENST00000542680 PDE6GP18545 87 aa7.32□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 RBM3P98179 157 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 ETDBQ3ZM63 59 aa7.31□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 Q6JHZ5 121 aa7.31□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 C3orf22Q8N5N4 141 aa7.31□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 LPAP08519 4548 aa7.3□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 CRYGAP11844 174 aa7.3□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 Q8NBF4 154 aa7.3□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 DSCR8Q96T75 97 aa7.3□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 LOC110117498A0A087WWA1 95 aa7.29□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 TRBV7-4A0A0J9YYF1 115 aa7.29□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
CACNA1C-IT3-201ENST00000542680 C9orf153Q5TBE3 101 aa7.27□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 A0A087X002 238 aa7.26□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 IGLV9-49A0A0B4J1Y8 123 aa7.26□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 ANAPC11Q9NYG5 84 aa7.26□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 A0A1B0GW54 56 aa7.25□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 MOBPQ13875 183 aa7.25□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 C14orf132Q9NPU4 83 aa7.25□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 Q6Q795 121 aa7.24□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 Q6ZQT0 140 aa7.24□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 A0A1B0GV72 72 aa7.22□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 J3QR89 54 aa7.22□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 CCKP06307 115 aa7.22□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 CD164Q04900 197 aa7.22□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
CACNA1C-IT3-201ENST00000542680 FAM240AA0A1B0GVK7 77 aa7.2□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 A0A0U1RQV1 116 aa7.18□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 A0A1W2PNM2 257 aa7.18□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 ACYP1P07311 99 aa7.18□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 K7ERU9 68 aa7.17□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 TRBV7-7A0A0K0K1E9 115 aa7.15□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 SPINK1P00995 79 aa7.15□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
CACNA1C-IT3-201ENST00000542680 Q5XG85 94 aa7.14□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 XP32Q5T750 250 aa7.13□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 LIMD2Q9BT23 127 aa7.12□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 A0A087WSZ3 146 aa7.11□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 UBL5Q9BZL1 73 aa7.09□□□□□ -1.27
CACNA1C-IT3-201ENST00000542680 HRCT1Q6UXD1 115 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms