RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 C14orf144Q96I85 54 aa8.91□□□□□ -0.98
CCND1-205ENST00000542367 KRTAP9-2Q9BYQ4 174 aa8.91□□□□□ -0.98
CCND1-205ENST00000542367 TCL1BO95988 128 aa8.9□□□□□ -0.98
CCND1-205ENST00000542367 BVES-AS1Q5T3Y7 98 aa8.9□□□□□ -0.98
CCND1-205ENST00000542367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
CCND1-205ENST00000542367 Q6JHZ5 121 aa8.88□□□□□ -0.99
CCND1-205ENST00000542367 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
CCND1-205ENST00000542367 IGLV8-61A0A075B6I0 122 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 CFC1P0CG37 223 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 OCIAD2Q56VL3 154 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
CCND1-205ENST00000542367 HIGD1BQ9P298 99 aa8.86□□□□□ -0.99
CCND1-205ENST00000542367 CLEC2BQ92478 149 aa8.85□□□□□ -0.99
CCND1-205ENST00000542367 RAB37Q96AX2 223 aa8.85□□□□□ -0.99
CCND1-205ENST00000542367 PPDPFLQ8WWR9 84 aa8.84□□□□□ -0.99
CCND1-205ENST00000542367 VAMP8Q9BV40 100 aa8.84□□□□□ -0.99
CCND1-205ENST00000542367 SNHG12Q9BXW3 62 aa8.84□□□□□ -0.99
CCND1-205ENST00000542367 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
CCND1-205ENST00000542367 A0A0B4J2C4 111 aa8.82□□□□□ -1
CCND1-205ENST00000542367 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
CCND1-205ENST00000542367 LCE2CQ5TA81 110 aa8.81□□□□□ -1
CCND1-205ENST00000542367 H0YGX0 51 aa8.8□□□□□ -1
CCND1-205ENST00000542367 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
CCND1-205ENST00000542367 H3BUT2 72 aa8.79□□□□□ -1
CCND1-205ENST00000542367 SNCGO76070 127 aa8.79□□□□□ -1
CCND1-205ENST00000542367 CEND1Q8N111 149 aa8.79□□□□□ -1
CCND1-205ENST00000542367 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
CCND1-205ENST00000542367 FAM218AQ96MZ4 157 aa8.78□□□□□ -1
CCND1-205ENST00000542367 PRO1854Q9UHT4 67 aa8.75□□□□□ -1.01
CCND1-205ENST00000542367 TMEM238LA0A1B0GVL6 79 aa8.74□□□□□ -1.01
CCND1-205ENST00000542367 A6NJY4 79 aa8.74□□□□□ -1.01
CCND1-205ENST00000542367 FXYD2P54710 66 aa8.73□□□□□ -1.01
CCND1-205ENST00000542367 NDUFV3P56181 108 aaKnown RBP8.73□□□□□ -1.01
CCND1-205ENST00000542367 LST1O00453 97 aa8.72□□□□□ -1.01
CCND1-205ENST00000542367 A0A1B0GX51 115 aa8.7□□□□□ -1.02
CCND1-205ENST00000542367 MT1HP80294 61 aa8.7□□□□□ -1.02
CCND1-205ENST00000542367 Q6Q795 121 aa8.7□□□□□ -1.02
CCND1-205ENST00000542367 PYY3Q5JQD4 70 aa8.69□□□□□ -1.02
CCND1-205ENST00000542367 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
CCND1-205ENST00000542367 OBSCN-AS1Q96MR7 158 aa8.69□□□□□ -1.02
CCND1-205ENST00000542367 H3BMG7 143 aa8.68□□□□□ -1.02
CCND1-205ENST00000542367 TRIAP1O43715 76 aa8.68□□□□□ -1.02
CCND1-205ENST00000542367 GHRHP01286 108 aa8.68□□□□□ -1.02
CCND1-205ENST00000542367 FABP2P12104 132 aa8.68□□□□□ -1.02
CCND1-205ENST00000542367 SS18L2Q9UHA2 77 aa8.68□□□□□ -1.02
CCND1-205ENST00000542367 A0A087WSZ3 146 aa8.64□□□□□ -1.03
CCND1-205ENST00000542367 HSD52Q0P140 79 aa8.64□□□□□ -1.03
CCND1-205ENST00000542367 Q75L30 129 aa8.64□□□□□ -1.03
CCND1-205ENST00000542367 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
CCND1-205ENST00000542367 Q96NJ1 140 aa8.63□□□□□ -1.03
CCND1-205ENST00000542367 K7ERJ3 54 aa8.62□□□□□ -1.03
CCND1-205ENST00000542367 PSMB2P49721 201 aa8.62□□□□□ -1.03
CCND1-205ENST00000542367 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
CCND1-205ENST00000542367 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
CCND1-205ENST00000542367 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
CCND1-205ENST00000542367 DNAL4O96015 105 aa8.6□□□□□ -1.03
CCND1-205ENST00000542367 COX6B2Q6YFQ2 88 aa8.6□□□□□ -1.03
CCND1-205ENST00000542367 ORMDL1Q9P0S3 153 aa8.59□□□□□ -1.03
CCND1-205ENST00000542367 COX6CP09669 75 aa8.58□□□□□ -1.04
CCND1-205ENST00000542367 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
CCND1-205ENST00000542367 A0A1B0GV72 72 aa8.57□□□□□ -1.04
CCND1-205ENST00000542367 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
CCND1-205ENST00000542367 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
CCND1-205ENST00000542367 H3BQ85 93 aa8.56□□□□□ -1.04
CCND1-205ENST00000542367 TMEM256-PLSCR3K7ERE1 68 aa8.55□□□□□ -1.04
CCND1-205ENST00000542367 M0R2T5 61 aa8.55□□□□□ -1.04
CCND1-205ENST00000542367 C20orf166-AS1Q96NR2 134 aa8.55□□□□□ -1.04
CCND1-205ENST00000542367 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
CCND1-205ENST00000542367 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
CCND1-205ENST00000542367 TRBV7-4A0A0J9YYF1 115 aa8.53□□□□□ -1.04
CCND1-205ENST00000542367 A8MUU9 505 aa8.53□□□□□ -1.04
CCND1-205ENST00000542367 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
CCND1-205ENST00000542367 DSCR10P59022 87 aa8.52□□□□□ -1.05
CCND1-205ENST00000542367 SIGMAR1Q99720 223 aa8.52□□□□□ -1.05
CCND1-205ENST00000542367 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
CCND1-205ENST00000542367 SCGB1C2P0DMR2 95 aa8.49□□□□□ -1.05
CCND1-205ENST00000542367 UBE2V1Q13404 147 aa8.49□□□□□ -1.05
CCND1-205ENST00000542367 TRACP01848 142 aa8.48□□□□□ -1.05
CCND1-205ENST00000542367 CCKP06307 115 aa8.48□□□□□ -1.05
CCND1-205ENST00000542367 LINC00313P59037 77 aa8.47□□□□□ -1.05
CCND1-205ENST00000542367 DEFB116Q30KQ4 102 aa8.47□□□□□ -1.05
CCND1-205ENST00000542367 LINC00472Q9H8W2 130 aa8.45□□□□□ -1.06
CCND1-205ENST00000542367 NOTCH2NLQ7Z3S9 236 aa8.43□□□□□ -1.06
CCND1-205ENST00000542367 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
CCND1-205ENST00000542367 RBM3P98179 157 aaKnown RBP8.42□□□□□ -1.06
CCND1-205ENST00000542367 VPS25Q9BRG1 176 aa8.42□□□□□ -1.06
CCND1-205ENST00000542367 CRCT1Q9UGL9 99 aa8.42□□□□□ -1.06
CCND1-205ENST00000542367 DSCR8Q96T75 97 aa8.41□□□□□ -1.06
CCND1-205ENST00000542367 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
CCND1-205ENST00000542367 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
CCND1-205ENST00000542367 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
CCND1-205ENST00000542367 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
CCND1-205ENST00000542367 C9JAW5 83 aa8.35□□□□□ -1.07
CCND1-205ENST00000542367 M0R143 59 aa8.34□□□□□ -1.07
CCND1-205ENST00000542367 NAA38Q9BRA0 125 aaKnown RBP8.34□□□□□ -1.07
CCND1-205ENST00000542367 A0A1B0GVX0 72 aa8.32□□□□□ -1.08
CCND1-205ENST00000542367 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
CCND1-205ENST00000542367 C8orf87E5RJ46 101 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms