RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PSPHP1O15172 72 aa9.73□□□□□ -0.85
CNOT9-208ENST00000542068 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
CNOT9-208ENST00000542068 IGFL1Q6UW32 110 aa9.71□□□□□ -0.86
CNOT9-208ENST00000542068 HCG22E2RYF7 251 aa9.71□□□□□ -0.86
CNOT9-208ENST00000542068 DNAH10Q8IVF4 4471 aa9.7□□□□□ -0.86
CNOT9-208ENST00000542068 SPRR1AP35321 89 aa9.69□□□□□ -0.86
CNOT9-208ENST00000542068 TLX1NBP0CAT3 122 aa9.68□□□□□ -0.86
CNOT9-208ENST00000542068 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
CNOT9-208ENST00000542068 SPRR4Q96PI1 79 aa9.67□□□□□ -0.86
CNOT9-208ENST00000542068 LINC00208Q96KT6 92 aa9.67□□□□□ -0.86
CNOT9-208ENST00000542068 F8WDY8 70 aa9.66□□□□□ -0.86
CNOT9-208ENST00000542068 UBE2AP49459 152 aa9.66□□□□□ -0.86
CNOT9-208ENST00000542068 hDV103S1A0JD37 113 aa9.65□□□□□ -0.86
CNOT9-208ENST00000542068 LYSTQ99698 3801 aa9.65□□□□□ -0.86
CNOT9-208ENST00000542068 PLA2G2DQ9UNK4 145 aa9.65□□□□□ -0.86
CNOT9-208ENST00000542068 MDFIQ99750 246 aa9.64□□□□□ -0.87
CNOT9-208ENST00000542068 TGP01266 2768 aa9.64□□□□□ -0.87
CNOT9-208ENST00000542068 IGLV5-37A0A075B6J1 123 aa9.62□□□□□ -0.87
CNOT9-208ENST00000542068 MP68P56378 58 aa9.61□□□□□ -0.87
CNOT9-208ENST00000542068 KRTAP11-1Q8IUC1 163 aa9.6□□□□□ -0.87
CNOT9-208ENST00000542068 H0Y9J4 135 aa9.58□□□□□ -0.88
CNOT9-208ENST00000542068 C1orf195Q5TG92 126 aa9.58□□□□□ -0.88
CNOT9-208ENST00000542068 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
CNOT9-208ENST00000542068 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
CNOT9-208ENST00000542068 A0A1B0GW54 56 aa9.57□□□□□ -0.88
CNOT9-208ENST00000542068 C16orf90A8MZG2 172 aa9.57□□□□□ -0.88
CNOT9-208ENST00000542068 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
CNOT9-208ENST00000542068 H0Y9P7 68 aa9.55□□□□□ -0.88
CNOT9-208ENST00000542068 LCE6AA0A183 80 aa9.55□□□□□ -0.88
CNOT9-208ENST00000542068 CMYA5Q8N3K9 4069 aa9.55□□□□□ -0.88
CNOT9-208ENST00000542068 A8MUN3 132 aa9.55□□□□□ -0.88
CNOT9-208ENST00000542068 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
CNOT9-208ENST00000542068 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
CNOT9-208ENST00000542068 APLNQ9ULZ1 77 aa9.52□□□□□ -0.89
CNOT9-208ENST00000542068 A8MU10 97 aa9.51□□□□□ -0.89
CNOT9-208ENST00000542068 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
CNOT9-208ENST00000542068 PANO1I0J062 215 aa9.5□□□□□ -0.89
CNOT9-208ENST00000542068 PCOTHQ58A44 107 aa9.5□□□□□ -0.89
CNOT9-208ENST00000542068 CNBPP62633 177 aaKnown RBP9.49□□□□□ -0.89
CNOT9-208ENST00000542068 NBDYA0A0U1RRE5 68 aa9.48□□□□□ -0.89
CNOT9-208ENST00000542068 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
CNOT9-208ENST00000542068 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
CNOT9-208ENST00000542068 NDUFB1O75438 58 aa9.47□□□□□ -0.89
CNOT9-208ENST00000542068 PRR15Q8IV56 129 aa9.47□□□□□ -0.89
CNOT9-208ENST00000542068 DNAH9Q9NYC9 4486 aa9.47□□□□□ -0.89
CNOT9-208ENST00000542068 Q1T7F1 81 aa9.46□□□□□ -0.9
CNOT9-208ENST00000542068 ANAPC11Q9NYG5 84 aa9.45□□□□□ -0.9
CNOT9-208ENST00000542068 NDUFS5O43920 106 aa9.44□□□□□ -0.9
CNOT9-208ENST00000542068 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
CNOT9-208ENST00000542068 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
CNOT9-208ENST00000542068 A8MWP4 228 aa9.43□□□□□ -0.9
CNOT9-208ENST00000542068 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
CNOT9-208ENST00000542068 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
CNOT9-208ENST00000542068 V9GYY9 64 aa9.43□□□□□ -0.9
CNOT9-208ENST00000542068 PRR15LQ9BU68 103 aa9.42□□□□□ -0.9
CNOT9-208ENST00000542068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
CNOT9-208ENST00000542068 LINC00472Q9H8W2 130 aa9.4□□□□□ -0.9
CNOT9-208ENST00000542068 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
CNOT9-208ENST00000542068 NUPR2A6NF83 97 aa9.39□□□□□ -0.91
CNOT9-208ENST00000542068 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
CNOT9-208ENST00000542068 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
CNOT9-208ENST00000542068 LY6G6CO95867 125 aa9.37□□□□□ -0.91
CNOT9-208ENST00000542068 Q5VV11 94 aa9.35□□□□□ -0.91
CNOT9-208ENST00000542068 DNAH7Q8WXX0 4024 aa9.34□□□□□ -0.91
CNOT9-208ENST00000542068 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
CNOT9-208ENST00000542068 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
CNOT9-208ENST00000542068 DNAH3Q8TD57 4116 aa9.33□□□□□ -0.92
CNOT9-208ENST00000542068 COA5Q86WW8 74 aa9.33□□□□□ -0.92
CNOT9-208ENST00000542068 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-208ENST00000542068 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
CNOT9-208ENST00000542068 PMAIP1Q13794 54 aa9.32□□□□□ -0.92
CNOT9-208ENST00000542068 RTL8CO15255 209 aa9.31□□□□□ -0.92
CNOT9-208ENST00000542068 FBN3Q75N90 2809 aa9.31□□□□□ -0.92
CNOT9-208ENST00000542068 MOBPQ13875 183 aa9.3□□□□□ -0.92
CNOT9-208ENST00000542068 SPAG11AQ6PDA7 123 aa9.3□□□□□ -0.92
CNOT9-208ENST00000542068 A0A087WTM6 91 aa9.3□□□□□ -0.92
CNOT9-208ENST00000542068 A6NED7 52 aa9.3□□□□□ -0.92
CNOT9-208ENST00000542068 IGLV5-52A0A0A0MRZ9 124 aa9.28□□□□□ -0.92
CNOT9-208ENST00000542068 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
CNOT9-208ENST00000542068 SPRR1BP22528 89 aa9.28□□□□□ -0.92
CNOT9-208ENST00000542068 MEGF8Q7Z7M0 2845 aa9.28□□□□□ -0.92
CNOT9-208ENST00000542068 CD164Q04900 197 aa9.28□□□□□ -0.92
CNOT9-208ENST00000542068 SEC61GP60059 68 aa9.27□□□□□ -0.92
CNOT9-208ENST00000542068 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
CNOT9-208ENST00000542068 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
CNOT9-208ENST00000542068 A0A087X002 238 aa9.26□□□□□ -0.93
CNOT9-208ENST00000542068 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
CNOT9-208ENST00000542068 H3BPC8 53 aa9.25□□□□□ -0.93
CNOT9-208ENST00000542068 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
CNOT9-208ENST00000542068 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
CNOT9-208ENST00000542068 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
CNOT9-208ENST00000542068 CIRBP-AS1Q8TBR5 109 aa9.23□□□□□ -0.93
CNOT9-208ENST00000542068 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
CNOT9-208ENST00000542068 Q96NJ1 140 aa9.22□□□□□ -0.93
CNOT9-208ENST00000542068 C1orf134Q5TEV5 83 aa9.22□□□□□ -0.93
CNOT9-208ENST00000542068 FRAS1Q86XX4 4008 aa9.2□□□□□ -0.94
CNOT9-208ENST00000542068 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
CNOT9-208ENST00000542068 PRKDCP78527 4128 aaKnown RBP9.2□□□□□ -0.94
CNOT9-208ENST00000542068 RETNLBQ9BQ08 111 aa9.2□□□□□ -0.94
CNOT9-208ENST00000542068 STARD9Q9P2P6 4700 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 667.2 ms