RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 LITAFQ99732 161 aa4.4□□□□□ -1.71
NECAP1-205ENST00000541948 Q9BRP9 147 aa4.4□□□□□ -1.71
NECAP1-205ENST00000541948 VAMP8Q9BV40 100 aa4.4□□□□□ -1.71
NECAP1-205ENST00000541948 TTTY13Q9BZ97 58 aa4.4□□□□□ -1.71
NECAP1-205ENST00000541948 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
NECAP1-205ENST00000541948 SYS1-DBNDD2H3BUS1 97 aa4.39□□□□□ -1.71
NECAP1-205ENST00000541948 NPC2P61916 151 aa4.39□□□□□ -1.71
NECAP1-205ENST00000541948 FP248Q71RG6 208 aaPredicted RBP4.39□□□□□ -1.71
NECAP1-205ENST00000541948 HIST1H2BLQ99880 126 aa4.39□□□□□ -1.71
NECAP1-205ENST00000541948 E9PLD3 99 aa4.38□□□□□ -1.71
NECAP1-205ENST00000541948 IGLV6-57P01721 117 aa4.38□□□□□ -1.71
NECAP1-205ENST00000541948 LINC01545Q5VT33 79 aa4.38□□□□□ -1.71
NECAP1-205ENST00000541948 Q5XG85 94 aa4.38□□□□□ -1.71
NECAP1-205ENST00000541948 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
NECAP1-205ENST00000541948 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
NECAP1-205ENST00000541948 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 COA6Q5JTJ3 125 aaKnown RBP4.37□□□□□ -1.71
NECAP1-205ENST00000541948 LYRM7Q5U5X0 104 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 ANKRD29Q8N6D5 301 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 UQCR10Q9UDW1 63 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 MUC2Q02817 5179 aa4.37□□□□□ -1.71
NECAP1-205ENST00000541948 TRBV10-2A0A0K0K1G8 114 aa4.36□□□□□ -1.71
NECAP1-205ENST00000541948 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
NECAP1-205ENST00000541948 C3orf79P0CE67 100 aa4.36□□□□□ -1.71
NECAP1-205ENST00000541948 NMUP48645 174 aa4.36□□□□□ -1.71
NECAP1-205ENST00000541948 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 IFITM1P13164 125 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
NECAP1-205ENST00000541948 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
NECAP1-205ENST00000541948 Q6ZRX8 168 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 Q6ZVQ6 151 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 Q8NBF4 154 aa4.35□□□□□ -1.71
NECAP1-205ENST00000541948 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 SPINK1P00995 79 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 HERVK_113P61574 105 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 ST20-AS1Q8NBB2 130 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 NAA38Q9BRA0 125 aaKnown RBP4.34□□□□□ -1.71
NECAP1-205ENST00000541948 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
NECAP1-205ENST00000541948 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
NECAP1-205ENST00000541948 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 K7EP34 96 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 TMEM258P61165 79 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 MOBPQ13875 183 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 ATOH7Q8N100 152 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
NECAP1-205ENST00000541948 IGLV9-49A0A0B4J1Y8 123 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 ZNF815PA8K554 130 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 TAX1BP3O14907 124 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 ZNF73O43830 326 aaPredicted RBP4.31□□□□□ -1.72
NECAP1-205ENST00000541948 TIMM17BO60830 172 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 KRTDAPP60985 99 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 PCP2Q8IVA1 136 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
NECAP1-205ENST00000541948 S100A7L2Q5SY68 101 aa4.3□□□□□ -1.72
NECAP1-205ENST00000541948 Q8N377 158 aa4.3□□□□□ -1.72
NECAP1-205ENST00000541948 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
NECAP1-205ENST00000541948 F8W1H4 67 aa4.29□□□□□ -1.72
NECAP1-205ENST00000541948 UQCRQO14949 82 aa4.28□□□□□ -1.72
NECAP1-205ENST00000541948 SLC25A20O43772 301 aa4.28□□□□□ -1.72
NECAP1-205ENST00000541948 SPRR1BP22528 89 aa4.28□□□□□ -1.72
NECAP1-205ENST00000541948 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
NECAP1-205ENST00000541948 RAB37Q96AX2 223 aa4.28□□□□□ -1.72
NECAP1-205ENST00000541948 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
NECAP1-205ENST00000541948 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
NECAP1-205ENST00000541948 PSMB2P49721 201 aa4.27□□□□□ -1.73
NECAP1-205ENST00000541948 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
NECAP1-205ENST00000541948 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
NECAP1-205ENST00000541948 ELOF1P60002 83 aaKnown RBP4.27□□□□□ -1.73
NECAP1-205ENST00000541948 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
NECAP1-205ENST00000541948 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
NECAP1-205ENST00000541948 A0A0G2JQZ4 141 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 TRBV7-6A0A0J9YX20 115 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 NDUFS5O43920 106 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 MUSTN1Q8IVN3 82 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 COPS9Q8WXC6 57 aa4.26□□□□□ -1.73
NECAP1-205ENST00000541948 MT-ATP8P03928 68 aa4.25□□□□□ -1.73
NECAP1-205ENST00000541948 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
NECAP1-205ENST00000541948 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
NECAP1-205ENST00000541948 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
NECAP1-205ENST00000541948 COX7BP24311 80 aa4.24□□□□□ -1.73
NECAP1-205ENST00000541948 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
NECAP1-205ENST00000541948 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 TRACP01848 142 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 Q1RN00 199 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 SMIM11BQ8TCY0 68 aa4.22□□□□□ -1.73
NECAP1-205ENST00000541948 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
NECAP1-205ENST00000541948 SNCGO76070 127 aa4.21□□□□□ -1.74
NECAP1-205ENST00000541948 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.74
NECAP1-205ENST00000541948 DEFB105AQ8NG35 78 aa4.21□□□□□ -1.74
NECAP1-205ENST00000541948 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms