RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PRLHP81277 87 aa7.73□□□□□ -1.17
NPC1-202ENST00000540608 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
NPC1-202ENST00000540608 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
NPC1-202ENST00000540608 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
NPC1-202ENST00000540608 hDV103S1A0JD37 113 aa7.72□□□□□ -1.17
NPC1-202ENST00000540608 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
NPC1-202ENST00000540608 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
NPC1-202ENST00000540608 DEFB116Q30KQ4 102 aa7.71□□□□□ -1.18
NPC1-202ENST00000540608 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
NPC1-202ENST00000540608 A0A087WSZ3 146 aa7.7□□□□□ -1.18
NPC1-202ENST00000540608 MGAM2Q2M2H8 2515 aa7.69□□□□□ -1.18
NPC1-202ENST00000540608 DNAH9Q9NYC9 4486 aa7.68□□□□□ -1.18
NPC1-202ENST00000540608 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
NPC1-202ENST00000540608 UBE2AP49459 152 aa7.68□□□□□ -1.18
NPC1-202ENST00000540608 C1orf64Q8NEQ6 169 aa7.68□□□□□ -1.18
NPC1-202ENST00000540608 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
NPC1-202ENST00000540608 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
NPC1-202ENST00000540608 CYP4F30PQ9H0H9 118 aa7.66□□□□□ -1.18
NPC1-202ENST00000540608 H0Y9J4 135 aa7.65□□□□□ -1.18
NPC1-202ENST00000540608 NDUFB1O75438 58 aa7.65□□□□□ -1.18
NPC1-202ENST00000540608 SPRR1BP22528 89 aa7.65□□□□□ -1.18
NPC1-202ENST00000540608 KRTAP29-1A8MX34 341 aaPredicted RBP7.65□□□□□ -1.18
NPC1-202ENST00000540608 BRK1Q8WUW1 75 aa7.65□□□□□ -1.18
NPC1-202ENST00000540608 RPL37AP61513 92 aaKnown RBP7.65□□□□□ -1.19
NPC1-202ENST00000540608 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.19
NPC1-202ENST00000540608 MP68P56378 58 aa7.64□□□□□ -1.19
NPC1-202ENST00000540608 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
NPC1-202ENST00000540608 Q1T7F1 81 aa7.63□□□□□ -1.19
NPC1-202ENST00000540608 C14orf177Q52M58 125 aa7.63□□□□□ -1.19
NPC1-202ENST00000540608 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
NPC1-202ENST00000540608 TENM2Q9NT68 2774 aa7.62□□□□□ -1.19
NPC1-202ENST00000540608 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
NPC1-202ENST00000540608 PRR15Q8IV56 129 aa7.62□□□□□ -1.19
NPC1-202ENST00000540608 TRAV22A0A0B4J277 110 aa7.61□□□□□ -1.19
NPC1-202ENST00000540608 LINC00472Q9H8W2 130 aa7.61□□□□□ -1.19
NPC1-202ENST00000540608 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
NPC1-202ENST00000540608 CASC2Q6XLA1 102 aa7.6□□□□□ -1.19
NPC1-202ENST00000540608 A8MWP4 228 aa7.6□□□□□ -1.19
NPC1-202ENST00000540608 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
NPC1-202ENST00000540608 PRR4Q16378 134 aa7.59□□□□□ -1.19
NPC1-202ENST00000540608 UBE2DNLQ8IWF7 75 aa7.59□□□□□ -1.19
NPC1-202ENST00000540608 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
NPC1-202ENST00000540608 APLNQ9ULZ1 77 aa7.59□□□□□ -1.19
NPC1-202ENST00000540608 H3BPC8 53 aa7.59□□□□□ -1.2
NPC1-202ENST00000540608 C9orf163Q8N9P6 203 aa7.58□□□□□ -1.2
NPC1-202ENST00000540608 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
NPC1-202ENST00000540608 H0Y9P7 68 aa7.57□□□□□ -1.2
NPC1-202ENST00000540608 B9D2Q9BPU9 175 aa7.57□□□□□ -1.2
NPC1-202ENST00000540608 SPANXA2-OT1Q8N9U9 137 aa7.55□□□□□ -1.2
NPC1-202ENST00000540608 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
NPC1-202ENST00000540608 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
NPC1-202ENST00000540608 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
NPC1-202ENST00000540608 PLECQ15149 4684 aaKnown RBP7.53□□□□□ -1.2
NPC1-202ENST00000540608 MMP24-AS1A0A0U1RRL7 71 aa7.51□□□□□ -1.21
NPC1-202ENST00000540608 V9GYY9 64 aa7.51□□□□□ -1.21
NPC1-202ENST00000540608 PSPHP1O15172 72 aa7.5□□□□□ -1.21
NPC1-202ENST00000540608 PANO1I0J062 215 aa7.5□□□□□ -1.21
NPC1-202ENST00000540608 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
NPC1-202ENST00000540608 C1orf195Q5TG92 126 aa7.48□□□□□ -1.21
NPC1-202ENST00000540608 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
NPC1-202ENST00000540608 Q96NJ1 140 aa7.47□□□□□ -1.21
NPC1-202ENST00000540608 ASB16-AS1Q495Z4 193 aa7.46□□□□□ -1.22
NPC1-202ENST00000540608 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
NPC1-202ENST00000540608 A8MUN3 132 aa7.44□□□□□ -1.22
NPC1-202ENST00000540608 LINC00483Q53H64 154 aa7.44□□□□□ -1.22
NPC1-202ENST00000540608 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
NPC1-202ENST00000540608 TP53AIP1Q9HCN2 124 aa7.44□□□□□ -1.22
NPC1-202ENST00000540608 IGLV7-46A0A075B6I9 117 aa7.43□□□□□ -1.22
NPC1-202ENST00000540608 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
NPC1-202ENST00000540608 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
NPC1-202ENST00000540608 MOBPQ13875 183 aa7.43□□□□□ -1.22
NPC1-202ENST00000540608 Q8N9P0 234 aaPredicted RBP7.43□□□□□ -1.22
NPC1-202ENST00000540608 DNHD1Q96M86 4753 aa7.43□□□□□ -1.22
NPC1-202ENST00000540608 NUPR2A6NF83 97 aa7.42□□□□□ -1.22
NPC1-202ENST00000540608 LIMD2Q9BT23 127 aa7.42□□□□□ -1.22
NPC1-202ENST00000540608 Q5VV11 94 aa7.41□□□□□ -1.22
NPC1-202ENST00000540608 C8orf17Q9NRJ1 99 aa7.41□□□□□ -1.22
NPC1-202ENST00000540608 ZNF706Q9Y5V0 76 aaPredicted RBP7.4□□□□□ -1.23
NPC1-202ENST00000540608 Q6ZR54 194 aa7.39□□□□□ -1.23
NPC1-202ENST00000540608 VPS13DQ5THJ4 4388 aa7.39□□□□□ -1.23
NPC1-202ENST00000540608 COA5Q86WW8 74 aa7.38□□□□□ -1.23
NPC1-202ENST00000540608 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
NPC1-202ENST00000540608 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
NPC1-202ENST00000540608 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
NPC1-202ENST00000540608 CD164Q04900 197 aa7.37□□□□□ -1.23
NPC1-202ENST00000540608 PCOTHQ58A44 107 aa7.37□□□□□ -1.23
NPC1-202ENST00000540608 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
NPC1-202ENST00000540608 A0A087WTM6 91 aa7.36□□□□□ -1.23
NPC1-202ENST00000540608 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
NPC1-202ENST00000540608 IGLV5-52A0A0A0MRZ9 124 aa7.35□□□□□ -1.23
NPC1-202ENST00000540608 CDK2AP2O75956 126 aa7.35□□□□□ -1.23
NPC1-202ENST00000540608 PRR15LQ9BU68 103 aa7.35□□□□□ -1.23
NPC1-202ENST00000540608 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
NPC1-202ENST00000540608 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.23
NPC1-202ENST00000540608 NDUFS5O43920 106 aa7.34□□□□□ -1.23
NPC1-202ENST00000540608 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
NPC1-202ENST00000540608 KMT2AQ03164 3969 aa7.33□□□□□ -1.24
NPC1-202ENST00000540608 ZNF861PO60384 105 aa7.33□□□□□ -1.24
NPC1-202ENST00000540608 DNAH2Q9P225 4427 aa7.33□□□□□ -1.24
NPC1-202ENST00000540608 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms