RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 UBE2AP49459 152 aa8.89□□□□□ -0.99
INO80E-203ENST00000540562 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
INO80E-203ENST00000540562 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
INO80E-203ENST00000540562 TNP2Q05952 138 aa8.88□□□□□ -0.99
INO80E-203ENST00000540562 PANO1I0J062 215 aa8.88□□□□□ -0.99
INO80E-203ENST00000540562 DNAH3Q8TD57 4116 aa8.87□□□□□ -0.99
INO80E-203ENST00000540562 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
INO80E-203ENST00000540562 DNAH1Q9P2D7 4330 aa8.87□□□□□ -0.99
INO80E-203ENST00000540562 LINC00336Q6ZUF6 198 aa8.84□□□□□ -0.99
INO80E-203ENST00000540562 A0A0U1RQV1 116 aa8.84□□□□□ -0.99
INO80E-203ENST00000540562 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
INO80E-203ENST00000540562 PLA2G2DQ9UNK4 145 aa8.83□□□□□ -1
INO80E-203ENST00000540562 C16orf90A8MZG2 172 aa8.83□□□□□ -1
INO80E-203ENST00000540562 PLECQ15149 4684 aaKnown RBP8.82□□□□□ -1
INO80E-203ENST00000540562 F8WDY8 70 aa8.82□□□□□ -1
INO80E-203ENST00000540562 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
INO80E-203ENST00000540562 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
INO80E-203ENST00000540562 BCE1O60756 84 aa8.81□□□□□ -1
INO80E-203ENST00000540562 HCG22E2RYF7 251 aa8.8□□□□□ -1
INO80E-203ENST00000540562 H0Y9J4 135 aa8.79□□□□□ -1
INO80E-203ENST00000540562 MDFIQ99750 246 aa8.79□□□□□ -1
INO80E-203ENST00000540562 SPRR4Q96PI1 79 aa8.79□□□□□ -1
INO80E-203ENST00000540562 BRK1Q8WUW1 75 aa8.78□□□□□ -1
INO80E-203ENST00000540562 PKIGQ9Y2B9 76 aa8.77□□□□□ -1
INO80E-203ENST00000540562 NDUFC1O43677 76 aa8.77□□□□□ -1.01
INO80E-203ENST00000540562 LINC00208Q96KT6 92 aa8.77□□□□□ -1.01
INO80E-203ENST00000540562 FRAS1Q86XX4 4008 aa8.76□□□□□ -1.01
INO80E-203ENST00000540562 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
INO80E-203ENST00000540562 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
INO80E-203ENST00000540562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.74□□□□□ -1.01
INO80E-203ENST00000540562 FBN3Q75N90 2809 aa8.72□□□□□ -1.01
INO80E-203ENST00000540562 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
INO80E-203ENST00000540562 PSPHP1O15172 72 aa8.72□□□□□ -1.01
INO80E-203ENST00000540562 STARD9Q9P2P6 4700 aa8.71□□□□□ -1.01
INO80E-203ENST00000540562 CNBPP62633 177 aaKnown RBP8.71□□□□□ -1.01
INO80E-203ENST00000540562 C1orf64Q8NEQ6 169 aa8.71□□□□□ -1.01
INO80E-203ENST00000540562 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
INO80E-203ENST00000540562 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
INO80E-203ENST00000540562 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
INO80E-203ENST00000540562 MEGF8Q7Z7M0 2845 aa8.68□□□□□ -1.02
INO80E-203ENST00000540562 C9orf163Q8N9P6 203 aa8.68□□□□□ -1.02
INO80E-203ENST00000540562 PRKDCP78527 4128 aaKnown RBP8.68□□□□□ -1.02
INO80E-203ENST00000540562 NDUFS5O43920 106 aa8.66□□□□□ -1.02
INO80E-203ENST00000540562 PCOTHQ58A44 107 aa8.66□□□□□ -1.02
INO80E-203ENST00000540562 MP68P56378 58 aa8.65□□□□□ -1.02
INO80E-203ENST00000540562 H0Y9P7 68 aa8.65□□□□□ -1.02
INO80E-203ENST00000540562 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
INO80E-203ENST00000540562 PRR15Q8IV56 129 aa8.63□□□□□ -1.03
INO80E-203ENST00000540562 ATP5EP56381 51 aaPredicted RBP8.62□□□□□ -1.03
INO80E-203ENST00000540562 MOBPQ13875 183 aa8.62□□□□□ -1.03
INO80E-203ENST00000540562 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
INO80E-203ENST00000540562 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
INO80E-203ENST00000540562 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
INO80E-203ENST00000540562 SEC61GP60059 68 aa8.6□□□□□ -1.03
INO80E-203ENST00000540562 A0A1B0GW54 56 aa8.6□□□□□ -1.03
INO80E-203ENST00000540562 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
INO80E-203ENST00000540562 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
INO80E-203ENST00000540562 A8MWP4 228 aa8.58□□□□□ -1.04
INO80E-203ENST00000540562 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
INO80E-203ENST00000540562 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
INO80E-203ENST00000540562 PRO0628Q9UI54 55 aa8.57□□□□□ -1.04
INO80E-203ENST00000540562 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
INO80E-203ENST00000540562 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
INO80E-203ENST00000540562 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 A0A087X002 238 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 RTL8CO15255 209 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 NOTCH2NLQ7Z3S9 236 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 DNHD1Q96M86 4753 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 LCE6AA0A183 80 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 A8MU10 97 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 A0A087WTM6 91 aa8.55□□□□□ -1.04
INO80E-203ENST00000540562 A8MUN3 132 aa8.54□□□□□ -1.04
INO80E-203ENST00000540562 NDUFB1O75438 58 aa8.53□□□□□ -1.04
INO80E-203ENST00000540562 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
INO80E-203ENST00000540562 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.04
INO80E-203ENST00000540562 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
INO80E-203ENST00000540562 LY6G6CO95867 125 aa8.52□□□□□ -1.05
INO80E-203ENST00000540562 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.05
INO80E-203ENST00000540562 NUPR2A6NF83 97 aa8.52□□□□□ -1.05
INO80E-203ENST00000540562 DNAH2Q9P225 4427 aa8.51□□□□□ -1.05
INO80E-203ENST00000540562 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
INO80E-203ENST00000540562 V9GYY9 64 aa8.5□□□□□ -1.05
INO80E-203ENST00000540562 HECTD4Q9Y4D8 3996 aa8.49□□□□□ -1.05
INO80E-203ENST00000540562 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
INO80E-203ENST00000540562 VPS13DQ5THJ4 4388 aa8.49□□□□□ -1.05
INO80E-203ENST00000540562 SPRR1BP22528 89 aa8.49□□□□□ -1.05
INO80E-203ENST00000540562 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
INO80E-203ENST00000540562 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
INO80E-203ENST00000540562 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
INO80E-203ENST00000540562 DNAH17Q9UFH2 4485 aa8.47□□□□□ -1.05
INO80E-203ENST00000540562 Q96NJ1 140 aa8.46□□□□□ -1.05
INO80E-203ENST00000540562 C1orf195Q5TG92 126 aa8.45□□□□□ -1.06
INO80E-203ENST00000540562 WWC2-AS2Q96NR7 200 aa8.45□□□□□ -1.06
INO80E-203ENST00000540562 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
INO80E-203ENST00000540562 PRR15LQ9BU68 103 aa8.43□□□□□ -1.06
INO80E-203ENST00000540562 CD164Q04900 197 aa8.42□□□□□ -1.06
INO80E-203ENST00000540562 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.06
INO80E-203ENST00000540562 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.06
INO80E-203ENST00000540562 ZNF861PO60384 105 aa8.4□□□□□ -1.07
INO80E-203ENST00000540562 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms