RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SRRM2Q9UQ35 2752 aaKnown RBP3.88□□□□□ -1.79
SNHG1-212ENST00000539975 H0YGX0 51 aa3.88□□□□□ -1.79
SNHG1-212ENST00000539975 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
SNHG1-212ENST00000539975 SPRR4Q96PI1 79 aa3.88□□□□□ -1.79
SNHG1-212ENST00000539975 hADV29S1A0JD25 119 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 FXYD2P54710 66 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 DEFB105AQ8NG35 78 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 Q9BRP9 147 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 RYR1P21817 5038 aa3.87□□□□□ -1.79
SNHG1-212ENST00000539975 TEX49A0A1B0GTD5 131 aa3.86□□□□□ -1.79
SNHG1-212ENST00000539975 SCGB1C2P0DMR2 95 aa3.86□□□□□ -1.79
SNHG1-212ENST00000539975 OCIAD2Q56VL3 154 aa3.86□□□□□ -1.79
SNHG1-212ENST00000539975 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
SNHG1-212ENST00000539975 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 F8WEM9 126 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 DNAL4O96015 105 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 C9orf153Q5TBE3 101 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 LINC00575Q6W349 94 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 HSPG2P98160 4391 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 HERC2O95714 4834 aa3.85□□□□□ -1.79
SNHG1-212ENST00000539975 ERC2-IT1O76042 136 aa3.84□□□□□ -1.79
SNHG1-212ENST00000539975 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
SNHG1-212ENST00000539975 BATFQ16520 125 aa3.84□□□□□ -1.79
SNHG1-212ENST00000539975 SPAG11AQ6PDA7 123 aa3.84□□□□□ -1.79
SNHG1-212ENST00000539975 A0A087X002 238 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 A0A1B0GX51 115 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 K7ERJ3 54 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 LINC00483Q53H64 154 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 LYRM7Q5U5X0 104 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-212ENST00000539975 SSBP3-AS1Q7Z2R9 100 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 ST20-AS1Q8NBB2 130 aa3.83□□□□□ -1.8
SNHG1-212ENST00000539975 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 H3BQ85 93 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 MOBPQ13875 183 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 Q6ZQY7 126 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
SNHG1-212ENST00000539975 J3QR89 54 aa3.81□□□□□ -1.8
SNHG1-212ENST00000539975 TSPAN13O95857 204 aa3.81□□□□□ -1.8
SNHG1-212ENST00000539975 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
SNHG1-212ENST00000539975 SPRR1BP22528 89 aa3.81□□□□□ -1.8
SNHG1-212ENST00000539975 Q8NBF4 154 aa3.81□□□□□ -1.8
SNHG1-212ENST00000539975 IGLV5-48A0A075B6I7 105 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 SPINK1P00995 79 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 FABP2P12104 132 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 KRTAP13-2Q52LG2 175 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 GTF2H5Q6ZYL4 71 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 SIGMAR1Q99720 223 aa3.8□□□□□ -1.8
SNHG1-212ENST00000539975 FAT1Q14517 4588 aa3.79□□□□□ -1.8
SNHG1-212ENST00000539975 TMEM256-PLSCR3K7ERE1 68 aa3.79□□□□□ -1.8
SNHG1-212ENST00000539975 ORMDL1Q9P0S3 153 aa3.79□□□□□ -1.8
SNHG1-212ENST00000539975 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-212ENST00000539975 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 ATXN8Q156A1 80 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 Q6JHZ5 121 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 Q8N377 158 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 CLEC2BQ92478 149 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 LIMD2Q9BT23 127 aa3.78□□□□□ -1.8
SNHG1-212ENST00000539975 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
SNHG1-212ENST00000539975 TRACP01848 142 aa3.77□□□□□ -1.81
SNHG1-212ENST00000539975 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
SNHG1-212ENST00000539975 FAM218AQ96MZ4 157 aa3.77□□□□□ -1.81
SNHG1-212ENST00000539975 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 H3BMG7 143 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 H3BUT2 72 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 NDUFV3P56181 108 aaKnown RBP3.76□□□□□ -1.81
SNHG1-212ENST00000539975 CD164Q04900 197 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 PRR4Q16378 134 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 HRCT1Q6UXD1 115 aa3.76□□□□□ -1.81
SNHG1-212ENST00000539975 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
SNHG1-212ENST00000539975 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
SNHG1-212ENST00000539975 LST1O00453 97 aa3.75□□□□□ -1.81
SNHG1-212ENST00000539975 TCL1BO95988 128 aa3.75□□□□□ -1.81
SNHG1-212ENST00000539975 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-212ENST00000539975 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
SNHG1-212ENST00000539975 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
SNHG1-212ENST00000539975 NAA38Q9BRA0 125 aaKnown RBP3.75□□□□□ -1.81
SNHG1-212ENST00000539975 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
SNHG1-212ENST00000539975 BAALC-AS2P0C853 105 aa3.74□□□□□ -1.81
SNHG1-212ENST00000539975 ANKRD29Q8N6D5 301 aa3.73□□□□□ -1.81
SNHG1-212ENST00000539975 DSCR8Q96T75 97 aa3.73□□□□□ -1.81
SNHG1-212ENST00000539975 IGLV8-61A0A075B6I0 122 aa3.72□□□□□ -1.81
SNHG1-212ENST00000539975 A0A1W2PPM0 123 aa3.72□□□□□ -1.81
SNHG1-212ENST00000539975 JMJD7-PLA2G4BH0Y9G9 81 aa3.72□□□□□ -1.81
SNHG1-212ENST00000539975 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
SNHG1-212ENST00000539975 C9JAW5 83 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 TAX1BP3O14907 124 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-212ENST00000539975 TEN1Q86WV5 123 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 RETNLBQ9BQ08 111 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 SS18L2Q9UHA2 77 aa3.71□□□□□ -1.82
SNHG1-212ENST00000539975 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
SNHG1-212ENST00000539975 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms