RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
CDH13-204ENST00000539548 PRLHP81277 87 aa6.07□□□□□ -1.44
CDH13-204ENST00000539548 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
CDH13-204ENST00000539548 CYP4F30PQ9H0H9 118 aa6.06□□□□□ -1.44
CDH13-204ENST00000539548 DNAH3Q8TD57 4116 aa6.06□□□□□ -1.44
CDH13-204ENST00000539548 A0A087WSZ3 146 aa6.06□□□□□ -1.44
CDH13-204ENST00000539548 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
CDH13-204ENST00000539548 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
CDH13-204ENST00000539548 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 NDUFB1O75438 58 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
CDH13-204ENST00000539548 SPRR1BP22528 89 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 UBE2AP49459 152 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 Q1T7F1 81 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 WFDC13Q8IUB5 93 aa6.04□□□□□ -1.44
CDH13-204ENST00000539548 H0Y9J4 135 aa6.03□□□□□ -1.44
CDH13-204ENST00000539548 MP68P56378 58 aa6.03□□□□□ -1.44
CDH13-204ENST00000539548 MEGF8Q7Z7M0 2845 aa6.02□□□□□ -1.45
CDH13-204ENST00000539548 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
CDH13-204ENST00000539548 PRB2P02812 416 aaPredicted RBP6.01□□□□□ -1.45
CDH13-204ENST00000539548 RPL37AP61513 92 aaKnown RBP6.01□□□□□ -1.45
CDH13-204ENST00000539548 TRAV22A0A0B4J277 110 aa6.01□□□□□ -1.45
CDH13-204ENST00000539548 LRCOL1A6NCL2 159 aa6.01□□□□□ -1.45
CDH13-204ENST00000539548 TGP01266 2768 aa6□□□□□ -1.45
CDH13-204ENST00000539548 H3BPC8 53 aa6□□□□□ -1.45
CDH13-204ENST00000539548 K7EIL1 84 aa6□□□□□ -1.45
CDH13-204ENST00000539548 PRR15Q8IV56 129 aa6□□□□□ -1.45
CDH13-204ENST00000539548 C14orf177Q52M58 125 aa6□□□□□ -1.45
CDH13-204ENST00000539548 KRTAP11-1Q8IUC1 163 aa6□□□□□ -1.45
CDH13-204ENST00000539548 LINC00472Q9H8W2 130 aa6□□□□□ -1.45
CDH13-204ENST00000539548 CASC2Q6XLA1 102 aa5.99□□□□□ -1.45
CDH13-204ENST00000539548 PHF5AQ7RTV0 110 aaKnown RBP5.99□□□□□ -1.45
CDH13-204ENST00000539548 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
CDH13-204ENST00000539548 A8MWP4 228 aa5.99□□□□□ -1.45
CDH13-204ENST00000539548 PRR4Q16378 134 aa5.99□□□□□ -1.45
CDH13-204ENST00000539548 PKIGQ9Y2B9 76 aa5.98□□□□□ -1.45
CDH13-204ENST00000539548 H0Y9P7 68 aa5.97□□□□□ -1.45
CDH13-204ENST00000539548 SPANXA2-OT1Q8N9U9 137 aa5.97□□□□□ -1.45
CDH13-204ENST00000539548 CHTF8P0CG12 524 aa5.97□□□□□ -1.45
CDH13-204ENST00000539548 B9D2Q9BPU9 175 aa5.97□□□□□ -1.45
CDH13-204ENST00000539548 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
CDH13-204ENST00000539548 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.46
CDH13-204ENST00000539548 NOTCH1P46531 2555 aa5.94□□□□□ -1.46
CDH13-204ENST00000539548 UBE2DNLQ8IWF7 75 aa5.94□□□□□ -1.46
CDH13-204ENST00000539548 APLNQ9ULZ1 77 aa5.94□□□□□ -1.46
CDH13-204ENST00000539548 V9GYY9 64 aa5.94□□□□□ -1.46
CDH13-204ENST00000539548 C1orf195Q5TG92 126 aa5.93□□□□□ -1.46
CDH13-204ENST00000539548 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
CDH13-204ENST00000539548 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
CDH13-204ENST00000539548 PSPHP1O15172 72 aa5.92□□□□□ -1.46
CDH13-204ENST00000539548 DNAH10Q8IVF4 4471 aa5.9□□□□□ -1.46
CDH13-204ENST00000539548 A8MUN3 132 aa5.89□□□□□ -1.47
CDH13-204ENST00000539548 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
CDH13-204ENST00000539548 Q96NJ1 140 aa5.89□□□□□ -1.47
CDH13-204ENST00000539548 PANO1I0J062 215 aa5.88□□□□□ -1.47
CDH13-204ENST00000539548 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
CDH13-204ENST00000539548 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
CDH13-204ENST00000539548 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
CDH13-204ENST00000539548 TP53AIP1Q9HCN2 124 aa5.87□□□□□ -1.47
CDH13-204ENST00000539548 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
CDH13-204ENST00000539548 LIMD2Q9BT23 127 aa5.87□□□□□ -1.47
CDH13-204ENST00000539548 NBDYA0A0U1RRE5 68 aa5.86□□□□□ -1.47
CDH13-204ENST00000539548 Q5VV11 94 aa5.86□□□□□ -1.47
CDH13-204ENST00000539548 MOBPQ13875 183 aa5.86□□□□□ -1.47
CDH13-204ENST00000539548 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
CDH13-204ENST00000539548 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
CDH13-204ENST00000539548 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
CDH13-204ENST00000539548 IGLV9-49A0A0B4J1Y8 123 aa5.84□□□□□ -1.47
CDH13-204ENST00000539548 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
CDH13-204ENST00000539548 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
CDH13-204ENST00000539548 DYNC2H1Q8NCM8 4307 aaKnown RBP5.84□□□□□ -1.47
CDH13-204ENST00000539548 Q6ZR54 194 aa5.83□□□□□ -1.48
CDH13-204ENST00000539548 COA5Q86WW8 74 aa5.83□□□□□ -1.48
CDH13-204ENST00000539548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
CDH13-204ENST00000539548 LYSTQ99698 3801 aa5.82□□□□□ -1.48
CDH13-204ENST00000539548 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
CDH13-204ENST00000539548 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
CDH13-204ENST00000539548 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
CDH13-204ENST00000539548 CD164Q04900 197 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 WWC2-AS2Q96NR7 200 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 STAB2Q8WWQ8 2551 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
CDH13-204ENST00000539548 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
CDH13-204ENST00000539548 COL7A1Q02388 2944 aa5.79□□□□□ -1.48
CDH13-204ENST00000539548 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
CDH13-204ENST00000539548 NUPR2A6NF83 97 aa5.79□□□□□ -1.48
CDH13-204ENST00000539548 CDK2AP2O75956 126 aa5.78□□□□□ -1.48
CDH13-204ENST00000539548 Q75L30 129 aa5.78□□□□□ -1.48
CDH13-204ENST00000539548 MRPL34Q9BQ48 92 aaKnown RBP5.78□□□□□ -1.48
CDH13-204ENST00000539548 A0A087WTM6 91 aa5.77□□□□□ -1.49
CDH13-204ENST00000539548 IGLV5-52A0A0A0MRZ9 124 aa5.77□□□□□ -1.49
CDH13-204ENST00000539548 NDUFS5O43920 106 aa5.77□□□□□ -1.49
CDH13-204ENST00000539548 PSORS1C2Q9UIG4 136 aa5.77□□□□□ -1.49
CDH13-204ENST00000539548 A8MU10 97 aa5.76□□□□□ -1.49
CDH13-204ENST00000539548 ZNF861PO60384 105 aa5.76□□□□□ -1.49
CDH13-204ENST00000539548 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
CDH13-204ENST00000539548 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms