RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
SCARB1-206ENST00000539320 NHP2Q9NX24 153 aaKnown RBP12.16□□□□□ -0.46
SCARB1-206ENST00000539320 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
SCARB1-206ENST00000539320 C9orf92A6NGG3 77 aa12.13□□□□□ -0.47
SCARB1-206ENST00000539320 Q5XG85 94 aa12.13□□□□□ -0.47
SCARB1-206ENST00000539320 PCP4L1A6NKN8 68 aa12.1□□□□□ -0.47
SCARB1-206ENST00000539320 HSD52Q0P140 79 aa12.09□□□□□ -0.47
SCARB1-206ENST00000539320 A0A0G2JQZ4 141 aa12.08□□□□□ -0.48
SCARB1-206ENST00000539320 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
SCARB1-206ENST00000539320 CEND1Q8N111 149 aa12.07□□□□□ -0.48
SCARB1-206ENST00000539320 VAMP3Q15836 100 aa12.06□□□□□ -0.48
SCARB1-206ENST00000539320 C1orf195Q5TG92 126 aa12.06□□□□□ -0.48
SCARB1-206ENST00000539320 F8WEM9 126 aa12.04□□□□□ -0.48
SCARB1-206ENST00000539320 FXYD2P54710 66 aa12.04□□□□□ -0.48
SCARB1-206ENST00000539320 LINC00575Q6W349 94 aa12.03□□□□□ -0.48
SCARB1-206ENST00000539320 IGLV8-61A0A075B6I0 122 aa12.02□□□□□ -0.49
SCARB1-206ENST00000539320 Q6ZQY7 126 aa12□□□□□ -0.49
SCARB1-206ENST00000539320 TCL1BO95988 128 aa11.99□□□□□ -0.49
SCARB1-206ENST00000539320 BATFQ16520 125 aa11.99□□□□□ -0.49
SCARB1-206ENST00000539320 BVES-AS1Q5T3Y7 98 aa11.99□□□□□ -0.49
SCARB1-206ENST00000539320 hADV29S1A0JD25 119 aa11.98□□□□□ -0.49
SCARB1-206ENST00000539320 TMEM238LA0A1B0GVL6 79 aa11.97□□□□□ -0.49
SCARB1-206ENST00000539320 A6NJY4 79 aa11.97□□□□□ -0.49
SCARB1-206ENST00000539320 M0R143 59 aa11.97□□□□□ -0.49
SCARB1-206ENST00000539320 LCE2CQ5TA81 110 aa11.97□□□□□ -0.49
SCARB1-206ENST00000539320 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SCARB1-206ENST00000539320 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SCARB1-206ENST00000539320 KRTAP19-2Q3LHN2 52 aa11.95□□□□□ -0.5
SCARB1-206ENST00000539320 K7ERJ3 54 aa11.94□□□□□ -0.5
SCARB1-206ENST00000539320 Q6JHZ5 121 aa11.94□□□□□ -0.5
SCARB1-206ENST00000539320 RAB37Q96AX2 223 aa11.93□□□□□ -0.5
SCARB1-206ENST00000539320 RPL37P61927 97 aaKnown RBP11.92□□□□□ -0.5
SCARB1-206ENST00000539320 CLEC2BQ92478 149 aa11.92□□□□□ -0.5
SCARB1-206ENST00000539320 KRTAP9-6A0A140TA67 174 aa11.91□□□□□ -0.5
SCARB1-206ENST00000539320 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.91□□□□□ -0.5
SCARB1-206ENST00000539320 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
SCARB1-206ENST00000539320 IGFL1Q6UW32 110 aa11.89□□□□□ -0.51
SCARB1-206ENST00000539320 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
SCARB1-206ENST00000539320 OCIAD2Q56VL3 154 aa11.87□□□□□ -0.51
SCARB1-206ENST00000539320 PPDPFLQ8WWR9 84 aa11.87□□□□□ -0.51
SCARB1-206ENST00000539320 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
SCARB1-206ENST00000539320 PRO1854Q9UHT4 67 aa11.86□□□□□ -0.51
SCARB1-206ENST00000539320 MT1HP80294 61 aa11.85□□□□□ -0.51
SCARB1-206ENST00000539320 LCE2DQ5TA82 110 aaPredicted RBP11.83□□□□□ -0.52
SCARB1-206ENST00000539320 H3BUT2 72 aa11.79□□□□□ -0.52
SCARB1-206ENST00000539320 NAA38Q9BRA0 125 aaKnown RBP11.78□□□□□ -0.52
SCARB1-206ENST00000539320 PSMB2P49721 201 aa11.75□□□□□ -0.53
SCARB1-206ENST00000539320 SNCGO76070 127 aa11.74□□□□□ -0.53
SCARB1-206ENST00000539320 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
SCARB1-206ENST00000539320 H0YGX0 51 aa11.72□□□□□ -0.53
SCARB1-206ENST00000539320 LST1O00453 97 aa11.72□□□□□ -0.53
SCARB1-206ENST00000539320 TAX1BP3O14907 124 aa11.72□□□□□ -0.53
SCARB1-206ENST00000539320 TRIAP1O43715 76 aa11.72□□□□□ -0.53
SCARB1-206ENST00000539320 OBSCN-AS1Q96MR7 158 aa11.72□□□□□ -0.53
SCARB1-206ENST00000539320 COX6B2Q6YFQ2 88 aa11.71□□□□□ -0.53
SCARB1-206ENST00000539320 FAM218AQ96MZ4 157 aa11.71□□□□□ -0.53
SCARB1-206ENST00000539320 SS18L2Q9UHA2 77 aa11.7□□□□□ -0.54
SCARB1-206ENST00000539320 Q6Q795 121 aa11.69□□□□□ -0.54
SCARB1-206ENST00000539320 Q75L30 129 aa11.68□□□□□ -0.54
SCARB1-206ENST00000539320 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
SCARB1-206ENST00000539320 FLGP20930 4061 aaPredicted RBP11.66□□□□□ -0.54
SCARB1-206ENST00000539320 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
SCARB1-206ENST00000539320 SCGB1C2P0DMR2 95 aa11.66□□□□□ -0.54
SCARB1-206ENST00000539320 TEN1Q86WV5 123 aa11.65□□□□□ -0.54
SCARB1-206ENST00000539320 A0A1B0GX51 115 aa11.64□□□□□ -0.55
SCARB1-206ENST00000539320 LORP23490 312 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-206ENST00000539320 KRTAP10-6P60371 365 aaPredicted RBP11.64□□□□□ -0.55
SCARB1-206ENST00000539320 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
SCARB1-206ENST00000539320 M0R2T5 61 aa11.63□□□□□ -0.55
SCARB1-206ENST00000539320 COX6CP09669 75 aa11.63□□□□□ -0.55
SCARB1-206ENST00000539320 A0A087WSZ3 146 aa11.61□□□□□ -0.55
SCARB1-206ENST00000539320 GHRHP01286 108 aa11.61□□□□□ -0.55
SCARB1-206ENST00000539320 Q96NJ1 140 aa11.6□□□□□ -0.55
SCARB1-206ENST00000539320 A0A1W2PPM0 123 aa11.59□□□□□ -0.55
SCARB1-206ENST00000539320 H3BMG7 143 aa11.59□□□□□ -0.55
SCARB1-206ENST00000539320 FABP2P12104 132 aa11.59□□□□□ -0.55
SCARB1-206ENST00000539320 CRCT1Q9UGL9 99 aa11.57□□□□□ -0.56
SCARB1-206ENST00000539320 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
SCARB1-206ENST00000539320 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
SCARB1-206ENST00000539320 FSIP2Q5CZC0 6907 aa11.53□□□□□ -0.56
SCARB1-206ENST00000539320 A0A1W2PNM2 257 aa11.51□□□□□ -0.57
SCARB1-206ENST00000539320 A8MUU9 505 aa11.51□□□□□ -0.57
SCARB1-206ENST00000539320 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
SCARB1-206ENST00000539320 DNAL4O96015 105 aa11.5□□□□□ -0.57
SCARB1-206ENST00000539320 ATXN8Q156A1 80 aa11.5□□□□□ -0.57
SCARB1-206ENST00000539320 SIGMAR1Q99720 223 aa11.5□□□□□ -0.57
SCARB1-206ENST00000539320 ORMDL1Q9P0S3 153 aa11.47□□□□□ -0.57
SCARB1-206ENST00000539320 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.57
SCARB1-206ENST00000539320 DSCR10P59022 87 aa11.46□□□□□ -0.57
SCARB1-206ENST00000539320 H3BQ85 93 aa11.45□□□□□ -0.58
SCARB1-206ENST00000539320 TRACP01848 142 aa11.45□□□□□ -0.58
SCARB1-206ENST00000539320 A0A1B0GV72 72 aa11.44□□□□□ -0.58
SCARB1-206ENST00000539320 K7EP34 96 aa11.44□□□□□ -0.58
SCARB1-206ENST00000539320 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
SCARB1-206ENST00000539320 A0A1B0GV90 55 aa11.43□□□□□ -0.58
SCARB1-206ENST00000539320 TRBV7-4A0A0J9YYF1 115 aa11.42□□□□□ -0.58
SCARB1-206ENST00000539320 MTURNQ8N3F0 131 aa11.41□□□□□ -0.58
SCARB1-206ENST00000539320 C9JAW5 83 aa11.4□□□□□ -0.58
SCARB1-206ENST00000539320 TMEM256-PLSCR3K7ERE1 68 aa11.39□□□□□ -0.59
SCARB1-206ENST00000539320 IGKV4-1P06312 121 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms