RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TRBV20-1A0A075B6N2 111 aa6.55□□□□□ -1.36
YBX3-207ENST00000539204 LINC00158P58513 81 aa6.55□□□□□ -1.36
YBX3-207ENST00000539204 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
YBX3-207ENST00000539204 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
YBX3-207ENST00000539204 NPC2P61916 151 aa6.52□□□□□ -1.37
YBX3-207ENST00000539204 TRAV13-2A0A0B4J235 113 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 F8W1H4 67 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 VPREB1P12018 145 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 PFN2P35080 140 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 SSBP3-AS1Q7Z2R9 100 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
YBX3-207ENST00000539204 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
YBX3-207ENST00000539204 NDUFC2O95298 119 aa6.5□□□□□ -1.37
YBX3-207ENST00000539204 COX6CP09669 75 aa6.5□□□□□ -1.37
YBX3-207ENST00000539204 PSMB2P49721 201 aa6.5□□□□□ -1.37
YBX3-207ENST00000539204 H3BMG7 143 aa6.49□□□□□ -1.37
YBX3-207ENST00000539204 SCGB1C2P0DMR2 95 aa6.49□□□□□ -1.37
YBX3-207ENST00000539204 Q1RN00 199 aa6.49□□□□□ -1.37
YBX3-207ENST00000539204 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
YBX3-207ENST00000539204 IGLV9-49A0A0B4J1Y8 123 aa6.48□□□□□ -1.37
YBX3-207ENST00000539204 TRIAP1O43715 76 aa6.48□□□□□ -1.37
YBX3-207ENST00000539204 TCL1BO95988 128 aa6.48□□□□□ -1.37
YBX3-207ENST00000539204 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
YBX3-207ENST00000539204 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
YBX3-207ENST00000539204 H7C2G1 150 aa6.47□□□□□ -1.37
YBX3-207ENST00000539204 MOBPQ13875 183 aa6.47□□□□□ -1.37
YBX3-207ENST00000539204 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
YBX3-207ENST00000539204 ATXN8Q156A1 80 aa6.46□□□□□ -1.38
YBX3-207ENST00000539204 LINC00483Q53H64 154 aa6.46□□□□□ -1.38
YBX3-207ENST00000539204 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
YBX3-207ENST00000539204 LST1O00453 97 aa6.44□□□□□ -1.38
YBX3-207ENST00000539204 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
YBX3-207ENST00000539204 H0YGX0 51 aa6.43□□□□□ -1.38
YBX3-207ENST00000539204 TRACP01848 142 aa6.42□□□□□ -1.38
YBX3-207ENST00000539204 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
YBX3-207ENST00000539204 OCIAD2Q56VL3 154 aa6.42□□□□□ -1.38
YBX3-207ENST00000539204 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
YBX3-207ENST00000539204 Q8NDZ9 215 aa6.42□□□□□ -1.38
YBX3-207ENST00000539204 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
YBX3-207ENST00000539204 C9JAW5 83 aa6.4□□□□□ -1.38
YBX3-207ENST00000539204 K7ERU9 68 aa6.4□□□□□ -1.38
YBX3-207ENST00000539204 OR13C6PQ8NH95 151 aa6.4□□□□□ -1.38
YBX3-207ENST00000539204 H3BT86 120 aa6.39□□□□□ -1.39
YBX3-207ENST00000539204 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
YBX3-207ENST00000539204 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
YBX3-207ENST00000539204 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
YBX3-207ENST00000539204 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
YBX3-207ENST00000539204 A0A1B0GX51 115 aa6.38□□□□□ -1.39
YBX3-207ENST00000539204 PRYO14603 147 aa6.38□□□□□ -1.39
YBX3-207ENST00000539204 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
YBX3-207ENST00000539204 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
YBX3-207ENST00000539204 SPRR1AP35321 89 aa6.37□□□□□ -1.39
YBX3-207ENST00000539204 Q6Q795 121 aa6.37□□□□□ -1.39
YBX3-207ENST00000539204 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
YBX3-207ENST00000539204 CBY1Q9Y3M2 126 aa6.37□□□□□ -1.39
YBX3-207ENST00000539204 J3QR89 54 aa6.36□□□□□ -1.39
YBX3-207ENST00000539204 S100A7L2Q5SY68 101 aa6.36□□□□□ -1.39
YBX3-207ENST00000539204 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
YBX3-207ENST00000539204 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
YBX3-207ENST00000539204 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
YBX3-207ENST00000539204 NCR3O14931 201 aa6.35□□□□□ -1.39
YBX3-207ENST00000539204 PPDPFLQ8WWR9 84 aa6.35□□□□□ -1.39
YBX3-207ENST00000539204 FAM218AQ96MZ4 157 aa6.35□□□□□ -1.39
YBX3-207ENST00000539204 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
YBX3-207ENST00000539204 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.39
YBX3-207ENST00000539204 ERC2-IT1O76042 136 aa6.34□□□□□ -1.39
YBX3-207ENST00000539204 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
YBX3-207ENST00000539204 TRBV10-3A0A0K0K1G6 114 aa6.32□□□□□ -1.4
YBX3-207ENST00000539204 SNCGO76070 127 aa6.32□□□□□ -1.4
YBX3-207ENST00000539204 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
YBX3-207ENST00000539204 B5MCH6 92 aa6.31□□□□□ -1.4
YBX3-207ENST00000539204 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
YBX3-207ENST00000539204 HRCT1Q6UXD1 115 aa6.31□□□□□ -1.4
YBX3-207ENST00000539204 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
YBX3-207ENST00000539204 DNAL4O96015 105 aa6.3□□□□□ -1.4
YBX3-207ENST00000539204 LINC00575Q6W349 94 aa6.3□□□□□ -1.4
YBX3-207ENST00000539204 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
YBX3-207ENST00000539204 H3BQ85 93 aa6.29□□□□□ -1.4
YBX3-207ENST00000539204 LCE2BO14633 110 aa6.28□□□□□ -1.4
YBX3-207ENST00000539204 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
YBX3-207ENST00000539204 Q9BRP9 147 aa6.28□□□□□ -1.4
YBX3-207ENST00000539204 TEX49A0A1B0GTD5 131 aa6.27□□□□□ -1.41
YBX3-207ENST00000539204 ELOF1P60002 83 aaKnown RBP6.27□□□□□ -1.41
YBX3-207ENST00000539204 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
YBX3-207ENST00000539204 hADV29S1A0JD25 119 aa6.26□□□□□ -1.41
YBX3-207ENST00000539204 COX7BP24311 80 aa6.26□□□□□ -1.41
YBX3-207ENST00000539204 OBSCN-AS1Q96MR7 158 aa6.26□□□□□ -1.41
YBX3-207ENST00000539204 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
YBX3-207ENST00000539204 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
YBX3-207ENST00000539204 VPS25Q9BRG1 176 aa6.25□□□□□ -1.41
YBX3-207ENST00000539204 FAM240AA0A1B0GVK7 77 aa6.24□□□□□ -1.41
YBX3-207ENST00000539204 GHRHP01286 108 aa6.24□□□□□ -1.41
YBX3-207ENST00000539204 Q6ZRX8 168 aa6.24□□□□□ -1.41
YBX3-207ENST00000539204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
YBX3-207ENST00000539204 ACYP1P07311 99 aa6.22□□□□□ -1.41
YBX3-207ENST00000539204 JMJD7-PLA2G4BH0Y9G9 81 aa6.21□□□□□ -1.42
YBX3-207ENST00000539204 MT2AP02795 61 aa6.21□□□□□ -1.42
YBX3-207ENST00000539204 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
YBX3-207ENST00000539204 C1orf195Q5TG92 126 aa6.19□□□□□ -1.42
YBX3-207ENST00000539204 Q6ZQY7 126 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms