RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 ASB16-AS1Q495Z4 193 aa4.31□□□□□ -1.72
SCAPER-203ENST00000538941 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
SCAPER-203ENST00000538941 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
SCAPER-203ENST00000538941 A6NN06 94 aa4.29□□□□□ -1.72
SCAPER-203ENST00000538941 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
SCAPER-203ENST00000538941 SSBP3-AS1Q7Z2R9 100 aa4.29□□□□□ -1.72
SCAPER-203ENST00000538941 FLNAP21333 2647 aaKnown RBP4.29□□□□□ -1.72
SCAPER-203ENST00000538941 CFAP47Q6ZTR5 3102 aa4.29□□□□□ -1.72
SCAPER-203ENST00000538941 USP24Q9UPU5 2620 aa4.28□□□□□ -1.72
SCAPER-203ENST00000538941 DCHS1Q96JQ0 3298 aa4.28□□□□□ -1.72
SCAPER-203ENST00000538941 DMDP11532 3685 aa4.28□□□□□ -1.72
SCAPER-203ENST00000538941 NUPR2A6NF83 97 aa4.28□□□□□ -1.72
SCAPER-203ENST00000538941 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
SCAPER-203ENST00000538941 ATMQ13315 3056 aa4.27□□□□□ -1.73
SCAPER-203ENST00000538941 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
SCAPER-203ENST00000538941 CSAG1Q6PB30 78 aa4.27□□□□□ -1.73
SCAPER-203ENST00000538941 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
SCAPER-203ENST00000538941 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
SCAPER-203ENST00000538941 GCN1Q92616 2671 aaKnown RBP4.26□□□□□ -1.73
SCAPER-203ENST00000538941 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SCAPER-203ENST00000538941 FAM229AH3BQW9 127 aa4.26□□□□□ -1.73
SCAPER-203ENST00000538941 SPRR1BP22528 89 aa4.26□□□□□ -1.73
SCAPER-203ENST00000538941 MAP1AP78559 2803 aaPredicted RBP4.26□□□□□ -1.73
SCAPER-203ENST00000538941 F8P00451 2351 aa4.26□□□□□ -1.73
SCAPER-203ENST00000538941 C9orf163Q8N9P6 203 aa4.25□□□□□ -1.73
SCAPER-203ENST00000538941 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
SCAPER-203ENST00000538941 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
SCAPER-203ENST00000538941 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
SCAPER-203ENST00000538941 SPINK1P00995 79 aa4.24□□□□□ -1.73
SCAPER-203ENST00000538941 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
SCAPER-203ENST00000538941 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
SCAPER-203ENST00000538941 ITPR3Q14573 2671 aa4.24□□□□□ -1.73
SCAPER-203ENST00000538941 HRES1P13985 223 aa4.23□□□□□ -1.73
SCAPER-203ENST00000538941 CENPEQ02224 2701 aa4.23□□□□□ -1.73
SCAPER-203ENST00000538941 CSMD1Q96PZ7 3565 aa4.23□□□□□ -1.73
SCAPER-203ENST00000538941 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
SCAPER-203ENST00000538941 ASPMQ8IZT6 3477 aa4.22□□□□□ -1.73
SCAPER-203ENST00000538941 SPINK7P58062 85 aa4.22□□□□□ -1.73
SCAPER-203ENST00000538941 PLA2G1BP04054 148 aaKnown RBP4.21□□□□□ -1.73
SCAPER-203ENST00000538941 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.74
SCAPER-203ENST00000538941 RTL8CO15255 209 aa4.21□□□□□ -1.74
SCAPER-203ENST00000538941 ZNF861PO60384 105 aa4.2□□□□□ -1.74
SCAPER-203ENST00000538941 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
SCAPER-203ENST00000538941 NBEAL2Q6ZNJ1 2754 aa4.2□□□□□ -1.74
SCAPER-203ENST00000538941 Q6ZR54 194 aa4.2□□□□□ -1.74
SCAPER-203ENST00000538941 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SCAPER-203ENST00000538941 FASNP49327 2511 aaKnown RBP4.19□□□□□ -1.74
SCAPER-203ENST00000538941 DCHS2Q6V1P9 2916 aa4.19□□□□□ -1.74
SCAPER-203ENST00000538941 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
SCAPER-203ENST00000538941 A8MU10 97 aa4.18□□□□□ -1.74
SCAPER-203ENST00000538941 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
SCAPER-203ENST00000538941 K7EIL1 84 aa4.17□□□□□ -1.74
SCAPER-203ENST00000538941 ITPR1Q14643 2758 aa4.17□□□□□ -1.74
SCAPER-203ENST00000538941 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
SCAPER-203ENST00000538941 SPACA4Q8TDM5 124 aa4.16□□□□□ -1.74
SCAPER-203ENST00000538941 APLNQ9ULZ1 77 aa4.16□□□□□ -1.74
SCAPER-203ENST00000538941 UNC79Q9P2D8 2635 aa4.16□□□□□ -1.74
SCAPER-203ENST00000538941 COL12A1Q99715 3063 aa4.15□□□□□ -1.74
SCAPER-203ENST00000538941 CRIPTQ9P021 101 aa4.15□□□□□ -1.74
SCAPER-203ENST00000538941 LAMA5O15230 3695 aa4.15□□□□□ -1.74
SCAPER-203ENST00000538941 IGSF10Q6WRI0 2623 aa4.15□□□□□ -1.75
SCAPER-203ENST00000538941 SETXQ7Z333 2677 aaKnown RBP4.14□□□□□ -1.75
SCAPER-203ENST00000538941 LY6G6CO95867 125 aa4.14□□□□□ -1.75
SCAPER-203ENST00000538941 SEC61BP60468 96 aaKnown RBP4.14□□□□□ -1.75
SCAPER-203ENST00000538941 A0A087WTM6 91 aa4.14□□□□□ -1.75
SCAPER-203ENST00000538941 ATRQ13535 2644 aa4.14□□□□□ -1.75
SCAPER-203ENST00000538941 HELZ2Q9BYK8 2649 aaKnown RBP4.13□□□□□ -1.75
SCAPER-203ENST00000538941 FLNCQ14315 2725 aa4.13□□□□□ -1.75
SCAPER-203ENST00000538941 RELNP78509 3460 aa4.13□□□□□ -1.75
SCAPER-203ENST00000538941 IGLV7-43P04211 117 aa4.13□□□□□ -1.75
SCAPER-203ENST00000538941 A0A087X002 238 aa4.13□□□□□ -1.75
SCAPER-203ENST00000538941 KRTAP1-5Q9BYS1 174 aa4.12□□□□□ -1.75
SCAPER-203ENST00000538941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
SCAPER-203ENST00000538941 Q96NJ1 140 aa4.12□□□□□ -1.75
SCAPER-203ENST00000538941 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
SCAPER-203ENST00000538941 UTP20O75691 2785 aaKnown RBP4.11□□□□□ -1.75
SCAPER-203ENST00000538941 ZANQ9Y493 2812 aa4.11□□□□□ -1.75
SCAPER-203ENST00000538941 SPENQ96T58 3664 aaKnown RBP4.11□□□□□ -1.75
SCAPER-203ENST00000538941 Q5W150 140 aa4.11□□□□□ -1.75
SCAPER-203ENST00000538941 WWC2-AS2Q96NR7 200 aa4.11□□□□□ -1.75
SCAPER-203ENST00000538941 ASH1LQ9NR48 2969 aaKnown RBP4.1□□□□□ -1.75
SCAPER-203ENST00000538941 KMT2BQ9UMN6 2715 aaPredicted RBP4.1□□□□□ -1.75
SCAPER-203ENST00000538941 MUC3AQ02505 3323 aa4.1□□□□□ -1.75
SCAPER-203ENST00000538941 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.75
SCAPER-203ENST00000538941 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
SCAPER-203ENST00000538941 CFAP46Q8IYW2 2715 aa4.09□□□□□ -1.75
SCAPER-203ENST00000538941 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
SCAPER-203ENST00000538941 ROMO1P60602 79 aa4.08□□□□□ -1.76
SCAPER-203ENST00000538941 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
SCAPER-203ENST00000538941 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
SCAPER-203ENST00000538941 SPATA8Q6RVD6 105 aa4.06□□□□□ -1.76
SCAPER-203ENST00000538941 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
SCAPER-203ENST00000538941 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
SCAPER-203ENST00000538941 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 Q8N1X5 172 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 BAHCC1Q9P281 2608 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 MXRA5Q9NR99 2828 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 PANO1I0J062 215 aa4.05□□□□□ -1.76
SCAPER-203ENST00000538941 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms