RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.52
SFSWAP-207ENST00000538548 LINC00208Q96KT6 92 aa11.83□□□□□ -0.52
SFSWAP-207ENST00000538548 PRB2P02812 416 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-207ENST00000538548 MRPL55Q7Z7F7 128 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-207ENST00000538548 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
SFSWAP-207ENST00000538548 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
SFSWAP-207ENST00000538548 DEFB116Q30KQ4 102 aa11.81□□□□□ -0.52
SFSWAP-207ENST00000538548 H3BPC8 53 aa11.79□□□□□ -0.52
SFSWAP-207ENST00000538548 A0A0G2JQZ4 141 aa11.78□□□□□ -0.52
SFSWAP-207ENST00000538548 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
SFSWAP-207ENST00000538548 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-207ENST00000538548 REG3GQ6UW15 175 aa11.77□□□□□ -0.52
SFSWAP-207ENST00000538548 LIMD2Q9BT23 127 aa11.77□□□□□ -0.52
SFSWAP-207ENST00000538548 A0A087WSZ3 146 aa11.77□□□□□ -0.53
SFSWAP-207ENST00000538548 Q8N9P0 234 aaPredicted RBP11.76□□□□□ -0.53
SFSWAP-207ENST00000538548 RETNQ9HD89 108 aa11.76□□□□□ -0.53
SFSWAP-207ENST00000538548 DNAH10OSP0CZ25 163 aa11.75□□□□□ -0.53
SFSWAP-207ENST00000538548 IGLV8-61A0A075B6I0 122 aa11.75□□□□□ -0.53
SFSWAP-207ENST00000538548 H0Y9P7 68 aa11.75□□□□□ -0.53
SFSWAP-207ENST00000538548 UBE2AP49459 152 aa11.75□□□□□ -0.53
SFSWAP-207ENST00000538548 A8MU10 97 aa11.74□□□□□ -0.53
SFSWAP-207ENST00000538548 CHKB-CPT1BH3BT56 60 aa11.73□□□□□ -0.53
SFSWAP-207ENST00000538548 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
SFSWAP-207ENST00000538548 CASC2Q6XLA1 102 aa11.72□□□□□ -0.53
SFSWAP-207ENST00000538548 LINC00588Q9Y4M8 146 aa11.72□□□□□ -0.53
SFSWAP-207ENST00000538548 DEFB131BA0A096LNP1 70 aa11.7□□□□□ -0.54
SFSWAP-207ENST00000538548 CD164Q04900 197 aa11.7□□□□□ -0.54
SFSWAP-207ENST00000538548 CASC10Q5T4H9 136 aa11.69□□□□□ -0.54
SFSWAP-207ENST00000538548 KRTAP10-11P60412 298 aa11.68□□□□□ -0.54
SFSWAP-207ENST00000538548 PRR15LQ9BU68 103 aa11.68□□□□□ -0.54
SFSWAP-207ENST00000538548 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
SFSWAP-207ENST00000538548 C16orf90A8MZG2 172 aa11.67□□□□□ -0.54
SFSWAP-207ENST00000538548 CNBPP62633 177 aaKnown RBP11.66□□□□□ -0.54
SFSWAP-207ENST00000538548 PRLHP81277 87 aa11.64□□□□□ -0.55
SFSWAP-207ENST00000538548 A8MWP4 228 aa11.64□□□□□ -0.55
SFSWAP-207ENST00000538548 Q75L30 129 aa11.63□□□□□ -0.55
SFSWAP-207ENST00000538548 C11orf45Q8TAV5 145 aa11.61□□□□□ -0.55
SFSWAP-207ENST00000538548 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
SFSWAP-207ENST00000538548 KTN1-AS1Q86SY8 53 aa11.61□□□□□ -0.55
SFSWAP-207ENST00000538548 ATP11AUNQ6ZP68 121 aa11.6□□□□□ -0.55
SFSWAP-207ENST00000538548 LINC00472Q9H8W2 130 aa11.6□□□□□ -0.55
SFSWAP-207ENST00000538548 COA5Q86WW8 74 aa11.59□□□□□ -0.55
SFSWAP-207ENST00000538548 DNAH1Q9P2D7 4330 aa11.58□□□□□ -0.56
SFSWAP-207ENST00000538548 IGLV7-46A0A075B6I9 117 aa11.58□□□□□ -0.56
SFSWAP-207ENST00000538548 LCA10Q71F78 164 aa11.58□□□□□ -0.56
SFSWAP-207ENST00000538548 SPTSSBQ8NFR3 76 aa11.57□□□□□ -0.56
SFSWAP-207ENST00000538548 A6NED7 52 aa11.56□□□□□ -0.56
SFSWAP-207ENST00000538548 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
SFSWAP-207ENST00000538548 COL7A1Q02388 2944 aa11.55□□□□□ -0.56
SFSWAP-207ENST00000538548 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
SFSWAP-207ENST00000538548 SPRR1BP22528 89 aa11.53□□□□□ -0.56
SFSWAP-207ENST00000538548 A0A096LNI7 61 aa11.52□□□□□ -0.57
SFSWAP-207ENST00000538548 MMP24-AS1A0A0U1RRL7 71 aa11.52□□□□□ -0.57
SFSWAP-207ENST00000538548 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
SFSWAP-207ENST00000538548 H0Y9J4 135 aa11.5□□□□□ -0.57
SFSWAP-207ENST00000538548 CDC42SE1Q9NRR8 79 aa11.5□□□□□ -0.57
SFSWAP-207ENST00000538548 MDFIQ99750 246 aa11.49□□□□□ -0.57
SFSWAP-207ENST00000538548 A6NN06 94 aa11.48□□□□□ -0.57
SFSWAP-207ENST00000538548 NDUFS5O43920 106 aa11.48□□□□□ -0.57
SFSWAP-207ENST00000538548 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
SFSWAP-207ENST00000538548 PHF5AQ7RTV0 110 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-207ENST00000538548 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.57
SFSWAP-207ENST00000538548 LINC01558Q9Y6Z2 57 aa11.46□□□□□ -0.58
SFSWAP-207ENST00000538548 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
SFSWAP-207ENST00000538548 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
SFSWAP-207ENST00000538548 DNHD1Q96M86 4753 aa11.44□□□□□ -0.58
SFSWAP-207ENST00000538548 LYSTQ99698 3801 aa11.44□□□□□ -0.58
SFSWAP-207ENST00000538548 PLAC8Q9NZF1 115 aa11.43□□□□□ -0.58
SFSWAP-207ENST00000538548 SRRM2Q9UQ35 2752 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-207ENST00000538548 ASB16-AS1Q495Z4 193 aa11.41□□□□□ -0.58
SFSWAP-207ENST00000538548 SPAG11AQ6PDA7 123 aa11.4□□□□□ -0.58
SFSWAP-207ENST00000538548 HUWE1Q7Z6Z7 4374 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-207ENST00000538548 KRTAP11-1Q8IUC1 163 aa11.4□□□□□ -0.58
SFSWAP-207ENST00000538548 MOBPQ13875 183 aa11.39□□□□□ -0.59
SFSWAP-207ENST00000538548 Q6ZR54 194 aa11.39□□□□□ -0.59
SFSWAP-207ENST00000538548 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
SFSWAP-207ENST00000538548 Q96NJ1 140 aa11.34□□□□□ -0.59
SFSWAP-207ENST00000538548 K7EIL1 84 aa11.34□□□□□ -0.59
SFSWAP-207ENST00000538548 C8orf17Q9NRJ1 99 aa11.32□□□□□ -0.6
SFSWAP-207ENST00000538548 CSMD3Q7Z407 3707 aa11.32□□□□□ -0.6
SFSWAP-207ENST00000538548 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
SFSWAP-207ENST00000538548 HRES1P13985 223 aa11.31□□□□□ -0.6
SFSWAP-207ENST00000538548 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
SFSWAP-207ENST00000538548 SPINK7P58062 85 aa11.29□□□□□ -0.6
SFSWAP-207ENST00000538548 MEGF8Q7Z7M0 2845 aa11.27□□□□□ -0.6
SFSWAP-207ENST00000538548 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
SFSWAP-207ENST00000538548 PRKDCP78527 4128 aaKnown RBP11.26□□□□□ -0.61
SFSWAP-207ENST00000538548 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
SFSWAP-207ENST00000538548 KRTAP13-1Q8IUC0 172 aa11.24□□□□□ -0.61
SFSWAP-207ENST00000538548 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
SFSWAP-207ENST00000538548 C14orf177Q52M58 125 aa11.23□□□□□ -0.61
SFSWAP-207ENST00000538548 IGHV6-1A0A0B4J1U7 121 aa11.22□□□□□ -0.61
SFSWAP-207ENST00000538548 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
SFSWAP-207ENST00000538548 TGP01266 2768 aa11.21□□□□□ -0.61
SFSWAP-207ENST00000538548 IGLV9-49A0A0B4J1Y8 123 aa11.21□□□□□ -0.61
SFSWAP-207ENST00000538548 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
SFSWAP-207ENST00000538548 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
SFSWAP-207ENST00000538548 LINC00483Q53H64 154 aa11.13□□□□□ -0.63
SFSWAP-207ENST00000538548 PRR26Q8N8Z3 221 aa11.13□□□□□ -0.63
SFSWAP-207ENST00000538548 A0A087X002 238 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms