RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 ROMO1P60602 79 aa4.25□□□□□ -1.73
CD9-207ENST00000538418 Q5BKY6 102 aa4.25□□□□□ -1.73
CD9-207ENST00000538418 SVBPQ8N300 66 aa4.25□□□□□ -1.73
CD9-207ENST00000538418 BRK1Q8WUW1 75 aa4.25□□□□□ -1.73
CD9-207ENST00000538418 FXYD6-FXYD2A0A087WZ82 144 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 TRBV27A0A0K0K1C4 114 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 M0R143 59 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 NCR2O95944 276 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
CD9-207ENST00000538418 IGLC6P0CF74 106 aa4.23□□□□□ -1.73
CD9-207ENST00000538418 KCNRGQ8N5I3 272 aa4.23□□□□□ -1.73
CD9-207ENST00000538418 VPS25Q9BRG1 176 aa4.23□□□□□ -1.73
CD9-207ENST00000538418 MANBALQ9NQG1 85 aa4.23□□□□□ -1.73
CD9-207ENST00000538418 CCL25O15444 150 aa4.22□□□□□ -1.73
CD9-207ENST00000538418 APOC3P02656 99 aa4.22□□□□□ -1.73
CD9-207ENST00000538418 COX6A2Q02221 97 aa4.22□□□□□ -1.73
CD9-207ENST00000538418 DIRC1Q969H9 104 aa4.22□□□□□ -1.73
CD9-207ENST00000538418 CNFNQ9BYD5 112 aa4.22□□□□□ -1.73
CD9-207ENST00000538418 GVQW2A0A096LPI5 108 aaPredicted RBP4.21□□□□□ -1.74
CD9-207ENST00000538418 Q1T7F1 81 aa4.21□□□□□ -1.74
CD9-207ENST00000538418 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
CD9-207ENST00000538418 C20orf202A1L168 122 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 TMEM218A2RU14 115 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 MT-ND4LP03901 98 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 MGPP08493 103 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 GNG4P50150 75 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 FAM213BQ8TBF2 198 aa4.2□□□□□ -1.74
CD9-207ENST00000538418 KANTRA0A1W2PQU2 76 aa4.19□□□□□ -1.74
CD9-207ENST00000538418 K7ERU9 68 aa4.19□□□□□ -1.74
CD9-207ENST00000538418 PEA15Q15121 130 aa4.19□□□□□ -1.74
CD9-207ENST00000538418 IGKV2D-26A0A0A0MRZ7 120 aa4.18□□□□□ -1.74
CD9-207ENST00000538418 I3L3M4 83 aa4.18□□□□□ -1.74
CD9-207ENST00000538418 SMCO4Q9NRQ5 59 aa4.18□□□□□ -1.74
CD9-207ENST00000538418 TRAV12-1A0A0B4J245 112 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 PPP1R17O96001 155 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
CD9-207ENST00000538418 MRPS36P82909 103 aaKnown RBP4.17□□□□□ -1.74
CD9-207ENST00000538418 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 TSKUQ8WUA8 353 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 GNG13Q9P2W3 67 aa4.17□□□□□ -1.74
CD9-207ENST00000538418 LINC00959A0A1B0GUT2 108 aa4.16□□□□□ -1.74
CD9-207ENST00000538418 A0A096LNI7 61 aa4.15□□□□□ -1.75
CD9-207ENST00000538418 KRTAP10-10P60014 251 aa4.15□□□□□ -1.75
CD9-207ENST00000538418 COL5A1-AS1Q5SY13 56 aa4.15□□□□□ -1.75
CD9-207ENST00000538418 CDC42SE2Q9NRR3 84 aa4.15□□□□□ -1.75
CD9-207ENST00000538418 IGKV3OR2-268A0A0C4DH90 116 aa4.14□□□□□ -1.75
CD9-207ENST00000538418 FABP4P15090 132 aa4.14□□□□□ -1.75
CD9-207ENST00000538418 POLR2KP53803 58 aaKnown RBP4.14□□□□□ -1.75
CD9-207ENST00000538418 SEC11CQ9BY50 192 aa4.14□□□□□ -1.75
CD9-207ENST00000538418 ST20Q9HBF5 79 aa4.14□□□□□ -1.75
CD9-207ENST00000538418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.13□□□□□ -1.75
CD9-207ENST00000538418 hDV103S1A0JD37 113 aa4.13□□□□□ -1.75
CD9-207ENST00000538418 IGKV2-29A2NJV5 120 aaPredicted RBP4.13□□□□□ -1.75
CD9-207ENST00000538418 PYY3Q5JQD4 70 aa4.13□□□□□ -1.75
CD9-207ENST00000538418 TMEM191AQ9H0A3 160 aa4.13□□□□□ -1.75
CD9-207ENST00000538418 MUC2Q02817 5179 aa4.13□□□□□ -1.75
CD9-207ENST00000538418 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
CD9-207ENST00000538418 RAB37Q96AX2 223 aa4.12□□□□□ -1.75
CD9-207ENST00000538418 A0A1B0GUT8 65 aa4.11□□□□□ -1.75
CD9-207ENST00000538418 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
CD9-207ENST00000538418 RPL39LQ96EH5 51 aaKnown RBP4.11□□□□□ -1.75
CD9-207ENST00000538418 SNHG12Q9BXW3 62 aa4.11□□□□□ -1.75
CD9-207ENST00000538418 MRPL35Q9NZE8 188 aaKnown RBP4.11□□□□□ -1.75
CD9-207ENST00000538418 UQCRQO14949 82 aa4.1□□□□□ -1.75
CD9-207ENST00000538418 FCER1GP30273 86 aa4.1□□□□□ -1.75
CD9-207ENST00000538418 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
CD9-207ENST00000538418 OCIAD2Q56VL3 154 aa4.09□□□□□ -1.75
CD9-207ENST00000538418 C1orf137Q5JT78 98 aa4.09□□□□□ -1.75
CD9-207ENST00000538418 C20orf78Q9BR46 151 aa4.09□□□□□ -1.75
CD9-207ENST00000538418 PRO1933Q9H354 126 aa4.09□□□□□ -1.75
CD9-207ENST00000538418 UBE2D4Q9Y2X8 147 aa4.09□□□□□ -1.75
CD9-207ENST00000538418 HIGD1CA8MV81 97 aa4.08□□□□□ -1.76
CD9-207ENST00000538418 HBDP02042 147 aa4.08□□□□□ -1.76
CD9-207ENST00000538418 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
CD9-207ENST00000538418 TMEM242Q9NWH2 141 aa4.08□□□□□ -1.76
CD9-207ENST00000538418 A0A087WSZ3 146 aa4.07□□□□□ -1.76
CD9-207ENST00000538418 NDUFA1O15239 70 aa4.07□□□□□ -1.76
CD9-207ENST00000538418 ALKAL2Q6UX46 152 aa4.07□□□□□ -1.76
CD9-207ENST00000538418 COA5Q86WW8 74 aa4.07□□□□□ -1.76
CD9-207ENST00000538418 LPAP08519 4548 aa4.07□□□□□ -1.76
CD9-207ENST00000538418 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
CD9-207ENST00000538418 SPAG11BQ08648 103 aa4.06□□□□□ -1.76
CD9-207ENST00000538418 CLEC2BQ92478 149 aa4.06□□□□□ -1.76
CD9-207ENST00000538418 ZNF727A8MUV8 499 aa4.05□□□□□ -1.76
CD9-207ENST00000538418 J3QR89 54 aa4.05□□□□□ -1.76
CD9-207ENST00000538418 ERC2-IT1O76042 136 aa4.05□□□□□ -1.76
CD9-207ENST00000538418 C5orf38Q86SI9 138 aa4.05□□□□□ -1.76
CD9-207ENST00000538418 SMIM7Q9BQ49 75 aa4.05□□□□□ -1.76
CD9-207ENST00000538418 CKS2P33552 79 aa4.04□□□□□ -1.76
CD9-207ENST00000538418 UBE2D1P51668 147 aa4.04□□□□□ -1.76
CD9-207ENST00000538418 C2orf82Q6UX34 121 aa4.04□□□□□ -1.76
CD9-207ENST00000538418 NUPR1O60356 82 aa4.03□□□□□ -1.76
CD9-207ENST00000538418 V9GYV3 84 aa4.03□□□□□ -1.76
CD9-207ENST00000538418 SMIM27A0A1W2PRY6 76 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 K7EMI3 77 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 TRACP01848 142 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms