RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 C9orf163Q8N9P6 203 aa11.38□□□□□ -0.59
TRA2A-211ENST00000538367 LINC00476Q8WZB0 136 aa11.38□□□□□ -0.59
TRA2A-211ENST00000538367 RETNQ9HD89 108 aa11.38□□□□□ -0.59
TRA2A-211ENST00000538367 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
TRA2A-211ENST00000538367 RBM12B-AS1Q9P1G2 102 aa11.37□□□□□ -0.59
TRA2A-211ENST00000538367 A8MU10 97 aa11.36□□□□□ -0.59
TRA2A-211ENST00000538367 A6NN06 94 aa11.35□□□□□ -0.59
TRA2A-211ENST00000538367 WFDC13Q8IUB5 93 aa11.35□□□□□ -0.59
TRA2A-211ENST00000538367 CDC42SE1Q9NRR8 79 aa11.35□□□□□ -0.59
TRA2A-211ENST00000538367 FBN1P35555 2871 aaKnown RBP11.35□□□□□ -0.59
TRA2A-211ENST00000538367 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
TRA2A-211ENST00000538367 IGFL1Q6UW32 110 aa11.32□□□□□ -0.6
TRA2A-211ENST00000538367 LCA10Q71F78 164 aa11.32□□□□□ -0.6
TRA2A-211ENST00000538367 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
TRA2A-211ENST00000538367 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
TRA2A-211ENST00000538367 VWFP04275 2813 aa11.31□□□□□ -0.6
TRA2A-211ENST00000538367 A6NED7 52 aa11.3□□□□□ -0.6
TRA2A-211ENST00000538367 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
TRA2A-211ENST00000538367 COA5Q86WW8 74 aa11.29□□□□□ -0.6
TRA2A-211ENST00000538367 SPTSSBQ8NFR3 76 aa11.29□□□□□ -0.6
TRA2A-211ENST00000538367 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
TRA2A-211ENST00000538367 C7orf65Q6ZTY9 151 aa11.27□□□□□ -0.61
TRA2A-211ENST00000538367 PLAC8Q9NZF1 115 aa11.26□□□□□ -0.61
TRA2A-211ENST00000538367 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
TRA2A-211ENST00000538367 A0A087WSZ3 146 aa11.25□□□□□ -0.61
TRA2A-211ENST00000538367 A8MWP4 228 aa11.25□□□□□ -0.61
TRA2A-211ENST00000538367 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
TRA2A-211ENST00000538367 STAB1Q9NY15 2570 aa11.25□□□□□ -0.61
TRA2A-211ENST00000538367 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
TRA2A-211ENST00000538367 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
TRA2A-211ENST00000538367 DEFB116Q30KQ4 102 aa11.22□□□□□ -0.61
TRA2A-211ENST00000538367 KRTAP7-1Q8IUC3 87 aa11.21□□□□□ -0.61
TRA2A-211ENST00000538367 COL6A5A8TX70 2615 aa11.21□□□□□ -0.62
TRA2A-211ENST00000538367 FAM168BA1KXE4 195 aa11.21□□□□□ -0.62
TRA2A-211ENST00000538367 OXLD1Q5BKU9 147 aa11.21□□□□□ -0.62
TRA2A-211ENST00000538367 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
TRA2A-211ENST00000538367 MDFIQ99750 246 aa11.17□□□□□ -0.62
TRA2A-211ENST00000538367 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
TRA2A-211ENST00000538367 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
TRA2A-211ENST00000538367 TP53AIP1Q9HCN2 124 aa11.15□□□□□ -0.62
TRA2A-211ENST00000538367 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
TRA2A-211ENST00000538367 MOBPQ13875 183 aa11.14□□□□□ -0.63
TRA2A-211ENST00000538367 NBEAL2Q6ZNJ1 2754 aa11.13□□□□□ -0.63
TRA2A-211ENST00000538367 CMYA5Q8N3K9 4069 aa11.13□□□□□ -0.63
TRA2A-211ENST00000538367 SPRR1BP22528 89 aa11.13□□□□□ -0.63
TRA2A-211ENST00000538367 MMP24-AS1A0A0U1RRL7 71 aa11.11□□□□□ -0.63
TRA2A-211ENST00000538367 ANK2Q01484 3957 aa11.11□□□□□ -0.63
TRA2A-211ENST00000538367 A0A0G2JQZ4 141 aa11.09□□□□□ -0.63
TRA2A-211ENST00000538367 A0A1W2PNN7 141 aa11.09□□□□□ -0.63
TRA2A-211ENST00000538367 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
TRA2A-211ENST00000538367 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
TRA2A-211ENST00000538367 Q6ZR54 194 aa11.08□□□□□ -0.64
TRA2A-211ENST00000538367 H0Y9J4 135 aa11.05□□□□□ -0.64
TRA2A-211ENST00000538367 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
TRA2A-211ENST00000538367 PRLHP81277 87 aa11.01□□□□□ -0.65
TRA2A-211ENST00000538367 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
TRA2A-211ENST00000538367 DNAH3Q8TD57 4116 aa10.99□□□□□ -0.65
TRA2A-211ENST00000538367 SPINK7P58062 85 aa10.98□□□□□ -0.65
TRA2A-211ENST00000538367 PCOTHQ58A44 107 aa10.97□□□□□ -0.65
TRA2A-211ENST00000538367 A0A087X002 238 aa10.97□□□□□ -0.65
TRA2A-211ENST00000538367 IGKV2-24A0A0C4DH68 120 aa10.97□□□□□ -0.65
TRA2A-211ENST00000538367 HRES1P13985 223 aa10.97□□□□□ -0.65
TRA2A-211ENST00000538367 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
TRA2A-211ENST00000538367 C8orf87E5RJ46 101 aa10.93□□□□□ -0.66
TRA2A-211ENST00000538367 K7EIL1 84 aa10.93□□□□□ -0.66
TRA2A-211ENST00000538367 NOTCH1P46531 2555 aa10.92□□□□□ -0.66
TRA2A-211ENST00000538367 C8orf17Q9NRJ1 99 aa10.91□□□□□ -0.66
TRA2A-211ENST00000538367 KRTAP21-3Q3LHN1 58 aa10.89□□□□□ -0.67
TRA2A-211ENST00000538367 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
TRA2A-211ENST00000538367 MGAM2Q2M2H8 2515 aa10.88□□□□□ -0.67
TRA2A-211ENST00000538367 NBEAL1Q6ZS30 2694 aa10.88□□□□□ -0.67
TRA2A-211ENST00000538367 A0A096LNI7 61 aa10.88□□□□□ -0.67
TRA2A-211ENST00000538367 Q96NJ1 140 aa10.88□□□□□ -0.67
TRA2A-211ENST00000538367 PLA2G1BP04054 148 aaKnown RBP10.87□□□□□ -0.67
TRA2A-211ENST00000538367 LINC00313P59037 77 aa10.86□□□□□ -0.67
TRA2A-211ENST00000538367 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
TRA2A-211ENST00000538367 DNAH1Q9P2D7 4330 aa10.83□□□□□ -0.68
TRA2A-211ENST00000538367 A0A1B0GVX0 72 aa10.82□□□□□ -0.68
TRA2A-211ENST00000538367 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
TRA2A-211ENST00000538367 ACYP2P14621 99 aa10.76□□□□□ -0.69
TRA2A-211ENST00000538367 LINC01554Q52M75 96 aa10.75□□□□□ -0.69
TRA2A-211ENST00000538367 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
TRA2A-211ENST00000538367 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
TRA2A-211ENST00000538367 KRTAP13-1Q8IUC0 172 aa10.74□□□□□ -0.69
TRA2A-211ENST00000538367 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
TRA2A-211ENST00000538367 C14orf177Q52M58 125 aa10.73□□□□□ -0.69
TRA2A-211ENST00000538367 KRTAP11-1Q8IUC1 163 aa10.72□□□□□ -0.69
TRA2A-211ENST00000538367 SPATA8Q6RVD6 105 aa10.72□□□□□ -0.69
TRA2A-211ENST00000538367 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
TRA2A-211ENST00000538367 RTL8CO15255 209 aa10.7□□□□□ -0.7
TRA2A-211ENST00000538367 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
TRA2A-211ENST00000538367 HUWE1Q7Z6Z7 4374 aaKnown RBP10.7□□□□□ -0.7
TRA2A-211ENST00000538367 LINC00483Q53H64 154 aa10.69□□□□□ -0.7
TRA2A-211ENST00000538367 KRTAP13-3Q3SY46 172 aa10.69□□□□□ -0.7
TRA2A-211ENST00000538367 PRAC1Q96KF2 57 aa10.69□□□□□ -0.7
TRA2A-211ENST00000538367 DMAC1Q96GE9 116 aa10.67□□□□□ -0.7
TRA2A-211ENST00000538367 ALMS1Q8TCU4 4167 aa10.64□□□□□ -0.71
TRA2A-211ENST00000538367 DNAH9Q9NYC9 4486 aa10.64□□□□□ -0.71
TRA2A-211ENST00000538367 TENM2Q9NT68 2774 aa10.63□□□□□ -0.71
TRA2A-211ENST00000538367 A0A1B0GU69 56 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms