RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
GGA3-201ENST00000537686 CASC10Q5T4H9 136 aa6.59□□□□□ -1.35
GGA3-201ENST00000537686 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
GGA3-201ENST00000537686 TRAV22A0A0B4J277 110 aa6.58□□□□□ -1.36
GGA3-201ENST00000537686 FAM229AH3BQW9 127 aa6.58□□□□□ -1.36
GGA3-201ENST00000537686 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
GGA3-201ENST00000537686 CSMD2Q7Z408 3487 aa6.57□□□□□ -1.36
GGA3-201ENST00000537686 Q8N377 158 aa6.57□□□□□ -1.36
GGA3-201ENST00000537686 PDZD2O15018 2839 aa6.57□□□□□ -1.36
GGA3-201ENST00000537686 A0A087WTM6 91 aa6.56□□□□□ -1.36
GGA3-201ENST00000537686 K7EQZ3 153 aa6.56□□□□□ -1.36
GGA3-201ENST00000537686 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 A0A1W2PNN7 141 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 PLA2G1BP04054 148 aaKnown RBP6.55□□□□□ -1.36
GGA3-201ENST00000537686 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 LINC00313P59037 77 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
GGA3-201ENST00000537686 TLX1NBP0CAT3 122 aa6.54□□□□□ -1.36
GGA3-201ENST00000537686 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
GGA3-201ENST00000537686 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
GGA3-201ENST00000537686 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
GGA3-201ENST00000537686 A8MWP4 228 aa6.52□□□□□ -1.37
GGA3-201ENST00000537686 ZNF861PO60384 105 aa6.52□□□□□ -1.37
GGA3-201ENST00000537686 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.37
GGA3-201ENST00000537686 APLNQ9ULZ1 77 aa6.52□□□□□ -1.37
GGA3-201ENST00000537686 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
GGA3-201ENST00000537686 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
GGA3-201ENST00000537686 OTOGQ6ZRI0 2925 aa6.51□□□□□ -1.37
GGA3-201ENST00000537686 H3BPC8 53 aa6.5□□□□□ -1.37
GGA3-201ENST00000537686 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
GGA3-201ENST00000537686 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
GGA3-201ENST00000537686 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
GGA3-201ENST00000537686 ACYP2P14621 99 aa6.49□□□□□ -1.37
GGA3-201ENST00000537686 WIPF1O43516 503 aa6.48□□□□□ -1.37
GGA3-201ENST00000537686 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
GGA3-201ENST00000537686 Q96NJ1 140 aa6.48□□□□□ -1.37
GGA3-201ENST00000537686 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
GGA3-201ENST00000537686 MRPL34Q9BQ48 92 aaKnown RBP6.48□□□□□ -1.37
GGA3-201ENST00000537686 PSORS1C2Q9UIG4 136 aa6.48□□□□□ -1.37
GGA3-201ENST00000537686 CNBPP62633 177 aaKnown RBP6.48□□□□□ -1.37
GGA3-201ENST00000537686 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
GGA3-201ENST00000537686 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
GGA3-201ENST00000537686 A0A1W2PNM2 257 aa6.46□□□□□ -1.38
GGA3-201ENST00000537686 CUBNO60494 3623 aa6.46□□□□□ -1.38
GGA3-201ENST00000537686 A0A1B0GU69 56 aa6.46□□□□□ -1.38
GGA3-201ENST00000537686 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
GGA3-201ENST00000537686 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
GGA3-201ENST00000537686 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
GGA3-201ENST00000537686 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
GGA3-201ENST00000537686 TENM1Q9UKZ4 2725 aa6.43□□□□□ -1.38
GGA3-201ENST00000537686 DSCR10P59022 87 aa6.42□□□□□ -1.38
GGA3-201ENST00000537686 SPRR4Q96PI1 79 aa6.42□□□□□ -1.38
GGA3-201ENST00000537686 LINC00304Q8N9R0 145 aa6.41□□□□□ -1.38
GGA3-201ENST00000537686 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
GGA3-201ENST00000537686 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
GGA3-201ENST00000537686 TNP2Q05952 138 aa6.41□□□□□ -1.38
GGA3-201ENST00000537686 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.38
GGA3-201ENST00000537686 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.39
GGA3-201ENST00000537686 KLKP1Q107X0 134 aa6.4□□□□□ -1.39
GGA3-201ENST00000537686 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.39
GGA3-201ENST00000537686 IGLV8-61A0A075B6I0 122 aa6.39□□□□□ -1.39
GGA3-201ENST00000537686 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
GGA3-201ENST00000537686 VWFP04275 2813 aa6.36□□□□□ -1.39
GGA3-201ENST00000537686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.36□□□□□ -1.39
GGA3-201ENST00000537686 J3QL48 77 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 LINC00336Q6ZUF6 198 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 H7BZZ5 65 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 C9orf92A6NGG3 77 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 COA5Q86WW8 74 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 Q8NDZ9 215 aa6.35□□□□□ -1.39
GGA3-201ENST00000537686 A8MUN3 132 aa6.34□□□□□ -1.39
GGA3-201ENST00000537686 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
GGA3-201ENST00000537686 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
GGA3-201ENST00000537686 Q5XG85 94 aa6.27□□□□□ -1.41
GGA3-201ENST00000537686 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
GGA3-201ENST00000537686 TENM3Q9P273 2699 aa6.26□□□□□ -1.41
GGA3-201ENST00000537686 SPRR1AP35321 89 aa6.25□□□□□ -1.41
GGA3-201ENST00000537686 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
GGA3-201ENST00000537686 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
GGA3-201ENST00000537686 ANK3Q12955 4377 aaKnown RBP6.23□□□□□ -1.41
GGA3-201ENST00000537686 UQCR11O14957 56 aa6.23□□□□□ -1.41
GGA3-201ENST00000537686 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
GGA3-201ENST00000537686 ZNF469Q96JG9 3925 aaPredicted RBP6.23□□□□□ -1.41
GGA3-201ENST00000537686 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
GGA3-201ENST00000537686 CYP4F30PQ9H0H9 118 aa6.22□□□□□ -1.41
GGA3-201ENST00000537686 PLAC8Q9NZF1 115 aa6.21□□□□□ -1.42
GGA3-201ENST00000537686 OXTP01178 125 aa6.21□□□□□ -1.42
GGA3-201ENST00000537686 Q8N1X5 172 aa6.21□□□□□ -1.42
GGA3-201ENST00000537686 CD164Q04900 197 aa6.19□□□□□ -1.42
GGA3-201ENST00000537686 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
GGA3-201ENST00000537686 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
GGA3-201ENST00000537686 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
GGA3-201ENST00000537686 PKD1L1Q8TDX9 2849 aa6.15□□□□□ -1.42
GGA3-201ENST00000537686 SPRR1BP22528 89 aa6.15□□□□□ -1.43
GGA3-201ENST00000537686 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.43
GGA3-201ENST00000537686 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
GGA3-201ENST00000537686 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
GGA3-201ENST00000537686 MMP24-AS1A0A0U1RRL7 71 aa6.13□□□□□ -1.43
GGA3-201ENST00000537686 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms