RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 TRAV13-2A0A0B4J235 113 aa7.55□□□□□ -1.2
SYNE1-235ENST00000537033 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
SYNE1-235ENST00000537033 COX8AP10176 69 aa7.54□□□□□ -1.2
SYNE1-235ENST00000537033 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
SYNE1-235ENST00000537033 F8WEM9 126 aa7.53□□□□□ -1.2
SYNE1-235ENST00000537033 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
SYNE1-235ENST00000537033 C1orf195Q5TG92 126 aa7.53□□□□□ -1.2
SYNE1-235ENST00000537033 PCP2Q8IVA1 136 aa7.53□□□□□ -1.2
SYNE1-235ENST00000537033 TCL1BO95988 128 aa7.52□□□□□ -1.21
SYNE1-235ENST00000537033 SMIM11BQ8TCY0 68 aa7.52□□□□□ -1.21
SYNE1-235ENST00000537033 DLEU1O43261 78 aa7.51□□□□□ -1.21
SYNE1-235ENST00000537033 VAMP3Q15836 100 aa7.51□□□□□ -1.21
SYNE1-235ENST00000537033 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
SYNE1-235ENST00000537033 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
SYNE1-235ENST00000537033 KRTAP19-2Q3LHN2 52 aa7.49□□□□□ -1.21
SYNE1-235ENST00000537033 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
SYNE1-235ENST00000537033 MT1HP80294 61 aa7.48□□□□□ -1.21
SYNE1-235ENST00000537033 M0R143 59 aa7.47□□□□□ -1.21
SYNE1-235ENST00000537033 Q6JHZ5 121 aa7.45□□□□□ -1.22
SYNE1-235ENST00000537033 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
SYNE1-235ENST00000537033 C2orf91Q6ZV80 131 aa7.45□□□□□ -1.22
SYNE1-235ENST00000537033 hADV29S1A0JD25 119 aa7.44□□□□□ -1.22
SYNE1-235ENST00000537033 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
SYNE1-235ENST00000537033 Q6ZQY7 126 aa7.44□□□□□ -1.22
SYNE1-235ENST00000537033 SNHG12Q9BXW3 62 aa7.44□□□□□ -1.22
SYNE1-235ENST00000537033 HIGD1BQ9P298 99 aa7.44□□□□□ -1.22
SYNE1-235ENST00000537033 CLEC2BQ92478 149 aa7.43□□□□□ -1.22
SYNE1-235ENST00000537033 HSD52Q0P140 79 aa7.42□□□□□ -1.22
SYNE1-235ENST00000537033 BATFQ16520 125 aa7.42□□□□□ -1.22
SYNE1-235ENST00000537033 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
SYNE1-235ENST00000537033 M0R2T5 61 aa7.41□□□□□ -1.22
SYNE1-235ENST00000537033 TRBV7-7A0A0K0K1E9 115 aa7.4□□□□□ -1.22
SYNE1-235ENST00000537033 BVES-AS1Q5T3Y7 98 aa7.39□□□□□ -1.23
SYNE1-235ENST00000537033 IGFL1Q6UW32 110 aa7.39□□□□□ -1.23
SYNE1-235ENST00000537033 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.39□□□□□ -1.23
SYNE1-235ENST00000537033 OCIAD2Q56VL3 154 aa7.38□□□□□ -1.23
SYNE1-235ENST00000537033 COL5A1-AS1Q5SY13 56 aa7.38□□□□□ -1.23
SYNE1-235ENST00000537033 PPDPFLQ8WWR9 84 aa7.38□□□□□ -1.23
SYNE1-235ENST00000537033 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-235ENST00000537033 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
SYNE1-235ENST00000537033 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
SYNE1-235ENST00000537033 CEND1Q8N111 149 aa7.35□□□□□ -1.23
SYNE1-235ENST00000537033 OBSCN-AS1Q96MR7 158 aa7.35□□□□□ -1.23
SYNE1-235ENST00000537033 ATP11AUNQ6ZP68 121 aa7.34□□□□□ -1.23
SYNE1-235ENST00000537033 SNCGO76070 127 aa7.33□□□□□ -1.24
SYNE1-235ENST00000537033 LST1O00453 97 aa7.32□□□□□ -1.24
SYNE1-235ENST00000537033 Q75L30 129 aa7.32□□□□□ -1.24
SYNE1-235ENST00000537033 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
SYNE1-235ENST00000537033 H3BUT2 72 aa7.31□□□□□ -1.24
SYNE1-235ENST00000537033 FXYD2P54710 66 aa7.31□□□□□ -1.24
SYNE1-235ENST00000537033 TMEM238LA0A1B0GVL6 79 aa7.3□□□□□ -1.24
SYNE1-235ENST00000537033 A6NJY4 79 aa7.3□□□□□ -1.24
SYNE1-235ENST00000537033 A0A1B0GV90 55 aa7.29□□□□□ -1.24
SYNE1-235ENST00000537033 Q6Q795 121 aa7.29□□□□□ -1.24
SYNE1-235ENST00000537033 RAB37Q96AX2 223 aa7.29□□□□□ -1.24
SYNE1-235ENST00000537033 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
SYNE1-235ENST00000537033 Q96NJ1 140 aa7.27□□□□□ -1.25
SYNE1-235ENST00000537033 H0YGX0 51 aa7.26□□□□□ -1.25
SYNE1-235ENST00000537033 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
SYNE1-235ENST00000537033 TEN1Q86WV5 123 aa7.25□□□□□ -1.25
SYNE1-235ENST00000537033 GHRHP01286 108 aa7.24□□□□□ -1.25
SYNE1-235ENST00000537033 CFC1P0CG37 223 aa7.24□□□□□ -1.25
SYNE1-235ENST00000537033 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
SYNE1-235ENST00000537033 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
SYNE1-235ENST00000537033 C9orf118A6NHY6 69 aa7.23□□□□□ -1.25
SYNE1-235ENST00000537033 K7ERJ3 54 aa7.23□□□□□ -1.25
SYNE1-235ENST00000537033 A0A087WSZ3 146 aa7.21□□□□□ -1.26
SYNE1-235ENST00000537033 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
SYNE1-235ENST00000537033 H3BMG7 143 aa7.2□□□□□ -1.26
SYNE1-235ENST00000537033 FAM218AQ96MZ4 157 aa7.2□□□□□ -1.26
SYNE1-235ENST00000537033 C20orf166-AS1Q96NR2 134 aa7.2□□□□□ -1.26
SYNE1-235ENST00000537033 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
SYNE1-235ENST00000537033 FABP2P12104 132 aa7.19□□□□□ -1.26
SYNE1-235ENST00000537033 A0A1B0GX51 115 aa7.18□□□□□ -1.26
SYNE1-235ENST00000537033 A8MUU9 505 aa7.18□□□□□ -1.26
SYNE1-235ENST00000537033 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
SYNE1-235ENST00000537033 A0A1W2PPM0 123 aa7.17□□□□□ -1.26
SYNE1-235ENST00000537033 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
SYNE1-235ENST00000537033 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
SYNE1-235ENST00000537033 DSCR10P59022 87 aa7.15□□□□□ -1.26
SYNE1-235ENST00000537033 LYRM7Q5U5X0 104 aa7.14□□□□□ -1.27
SYNE1-235ENST00000537033 GTF2H5Q6ZYL4 71 aa7.14□□□□□ -1.27
SYNE1-235ENST00000537033 DNAL4O96015 105 aa7.13□□□□□ -1.27
SYNE1-235ENST00000537033 UBE2V1Q13404 147 aa7.13□□□□□ -1.27
SYNE1-235ENST00000537033 SPCS1Q9Y6A9 102 aa7.13□□□□□ -1.27
SYNE1-235ENST00000537033 K7EP34 96 aa7.12□□□□□ -1.27
SYNE1-235ENST00000537033 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
SYNE1-235ENST00000537033 TRIAP1O43715 76 aa7.11□□□□□ -1.27
SYNE1-235ENST00000537033 PSMB2P49721 201 aa7.11□□□□□ -1.27
SYNE1-235ENST00000537033 ANKRD29Q8N6D5 301 aa7.11□□□□□ -1.27
SYNE1-235ENST00000537033 H3BQ85 93 aa7.1□□□□□ -1.27
SYNE1-235ENST00000537033 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
SYNE1-235ENST00000537033 LINC00313P59037 77 aa7.1□□□□□ -1.27
SYNE1-235ENST00000537033 ORMDL1Q9P0S3 153 aa7.1□□□□□ -1.27
SYNE1-235ENST00000537033 SCGB1C2P0DMR2 95 aa7.09□□□□□ -1.27
SYNE1-235ENST00000537033 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
SYNE1-235ENST00000537033 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
SYNE1-235ENST00000537033 A0A1B0GV72 72 aa7.08□□□□□ -1.28
SYNE1-235ENST00000537033 COX6CP09669 75 aa7.08□□□□□ -1.28
SYNE1-235ENST00000537033 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms