RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 TMEM238C9JI98 176 aa3.44□□□□□ -1.86
CCDC60-203ENST00000536742 COX17Q14061 63 aa3.44□□□□□ -1.86
CCDC60-203ENST00000536742 KRTAP26-1Q6PEX3 210 aa3.44□□□□□ -1.86
CCDC60-203ENST00000536742 C14orf144Q96I85 54 aa3.44□□□□□ -1.86
CCDC60-203ENST00000536742 GVQW2A0A096LPI5 108 aaPredicted RBP3.43□□□□□ -1.86
CCDC60-203ENST00000536742 LINC00158P58513 81 aa3.43□□□□□ -1.86
CCDC60-203ENST00000536742 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
CCDC60-203ENST00000536742 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
CCDC60-203ENST00000536742 MIEN1Q9BRT3 115 aa3.43□□□□□ -1.86
CCDC60-203ENST00000536742 M0R143 59 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 TIMM17BO60830 172 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 IFITM1P13164 125 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 TAL2Q16559 108 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
CCDC60-203ENST00000536742 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
CCDC60-203ENST00000536742 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
CCDC60-203ENST00000536742 ERG28Q9UKR5 140 aa3.41□□□□□ -1.86
CCDC60-203ENST00000536742 CBY1Q9Y3M2 126 aa3.41□□□□□ -1.86
CCDC60-203ENST00000536742 IGKV2D-26A0A0A0MRZ7 120 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 LOC107984640A0A0U1RRK4 108 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 PFN2P35080 140 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 HSD52Q0P140 79 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 C15orf56Q8N910 161 aa3.4□□□□□ -1.87
CCDC60-203ENST00000536742 ZNF625Q96I27 306 aaPredicted RBP3.4□□□□□ -1.87
CCDC60-203ENST00000536742 SPANXB1Q9NS25 103 aaPredicted RBP3.4□□□□□ -1.87
CCDC60-203ENST00000536742 A6NDN8 102 aa3.39□□□□□ -1.87
CCDC60-203ENST00000536742 NDUFC2-KCTD14E9PQ53 114 aa3.39□□□□□ -1.87
CCDC60-203ENST00000536742 SMIM13P0DJ93 91 aa3.39□□□□□ -1.87
CCDC60-203ENST00000536742 DDTP30046 118 aa3.39□□□□□ -1.87
CCDC60-203ENST00000536742 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
CCDC60-203ENST00000536742 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 TLX1NBP0CAT3 122 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 TSPEAR-AS2P59090 65 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
CCDC60-203ENST00000536742 MIR7-3HGQ8N6C7 128 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 LINC00526Q96FQ7 95 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 TP73-AS1Q9UF72 201 aa3.38□□□□□ -1.87
CCDC60-203ENST00000536742 PHF5AQ7RTV0 110 aaKnown RBP3.37□□□□□ -1.87
CCDC60-203ENST00000536742 DAND5Q8N907 189 aa3.37□□□□□ -1.87
CCDC60-203ENST00000536742 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
CCDC60-203ENST00000536742 C6orf48Q9UBA6 75 aa3.37□□□□□ -1.87
CCDC60-203ENST00000536742 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 SNCGO76070 127 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 UBE2AP49459 152 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 SEC61GP60059 68 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 MUSTN1Q8IVN3 82 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
CCDC60-203ENST00000536742 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 NDUFC2O95298 119 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 HINT1P49773 126 aaPredicted RBP3.35□□□□□ -1.87
CCDC60-203ENST00000536742 BATFQ16520 125 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 PCOTHQ58A44 107 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 C9orf116Q5BN46 136 aaPredicted RBP3.35□□□□□ -1.87
CCDC60-203ENST00000536742 S100A7L2Q5SY68 101 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 OR13C6PQ8NH95 151 aa3.35□□□□□ -1.87
CCDC60-203ENST00000536742 TRBV10-2A0A0K0K1G8 114 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 M0R378 163 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 MT2AP02795 61 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 COX6CP09669 75 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 NPC2P61916 151 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 VAMP3Q15836 100 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 COL5A1-AS1Q5SY13 56 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 BVES-AS1Q5T3Y7 98 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 LYRM7Q5U5X0 104 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
CCDC60-203ENST00000536742 TMEM126AQ9H061 195 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 XAGE1AQ9HD64 81 aa3.34□□□□□ -1.87
CCDC60-203ENST00000536742 A0A0B4J2C4 111 aa3.33□□□□□ -1.88
CCDC60-203ENST00000536742 DEFB116Q30KQ4 102 aa3.33□□□□□ -1.88
CCDC60-203ENST00000536742 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
CCDC60-203ENST00000536742 PRO1854Q9UHT4 67 aa3.33□□□□□ -1.88
CCDC60-203ENST00000536742 SCGB1C2P0DMR2 95 aa3.32□□□□□ -1.88
CCDC60-203ENST00000536742 PSMB2P49721 201 aa3.32□□□□□ -1.88
CCDC60-203ENST00000536742 KRTAP13-2Q52LG2 175 aa3.32□□□□□ -1.88
CCDC60-203ENST00000536742 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
CCDC60-203ENST00000536742 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
CCDC60-203ENST00000536742 FXYD2P54710 66 aa3.31□□□□□ -1.88
CCDC60-203ENST00000536742 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
CCDC60-203ENST00000536742 UBE2BP63146 152 aa3.31□□□□□ -1.88
CCDC60-203ENST00000536742 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
CCDC60-203ENST00000536742 H0YGX0 51 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 H7C2G1 150 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 M0QXV9 152 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 NCR3O14931 201 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 SLC25A20O43772 301 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 MT1FP04733 61 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 FAM19A5Q7Z5A7 132 aaPredicted RBP3.3□□□□□ -1.88
CCDC60-203ENST00000536742 C22orf24Q9Y442 160 aa3.3□□□□□ -1.88
CCDC60-203ENST00000536742 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
CCDC60-203ENST00000536742 FABP2P12104 132 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms