RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 COPS9Q8WXC6 57 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 KIR2DL4Q99706 377 aa2.85□□□□□ -1.95
CHD4-205ENST00000536301 IGLV5-37A0A075B6J1 123 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 TRBV7-7A0A0K0K1E9 115 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 CXCL5P42830 114 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 PMVKQ15126 192 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 C2orf66Q6UXQ4 117 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 Q8NDZ9 215 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 SPRR4Q96PI1 79 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 TIMM17AQ99595 171 aa2.84□□□□□ -1.95
CHD4-205ENST00000536301 J3QQQ9 107 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 M0R378 163 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 LEPROTO15243 131 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 PRSS2P07478 247 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 C9orf153Q5TBE3 101 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 LINC00643Q86TS7 51 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 Q8IZM0 81 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 LINC01561Q8N1V8 128 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 Q8N377 158 aa2.83□□□□□ -1.96
CHD4-205ENST00000536301 ATOX1O00244 68 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 TRACP01848 142 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 C4orf48Q5BLP8 95 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 C6orf226Q5I0X4 101 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 SFTA2Q6UW10 78 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 HIGD2AQ9BW72 106 aa2.82□□□□□ -1.96
CHD4-205ENST00000536301 A4D1N5 150 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 VPREB1P12018 145 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 COX7CP15954 63 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 GAGE2AQ6NT46 116 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 NKAPP1Q8N9T2 125 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 AMELXQ99217 191 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 NEBP20929 6669 aa2.81□□□□□ -1.96
CHD4-205ENST00000536301 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 TEX49A0A1B0GTD5 131 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 FAM236AA0A1B0GUQ0 79 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 FAM236BA0A1B0GV22 79 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 IGIPA6NJ69 53 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 LST1O00453 97 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 TIMM17BO60830 172 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 SPINK1P00995 79 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 TMEM258P61165 79 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 HERVK_113P63121 156 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 MUSTN1Q8IVN3 82 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 PYGO1Q9Y3Y4 419 aa2.8□□□□□ -1.96
CHD4-205ENST00000536301 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 SMIM1B2RUZ4 78 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 H7C2G1 150 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 LCE2BO14633 110 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 TRIAP1O43715 76 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 MOBPQ13875 183 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 FAM19A3Q7Z5A8 133 aa2.79□□□□□ -1.96
CHD4-205ENST00000536301 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
CHD4-205ENST00000536301 ZNF22P17026 224 aaPredicted RBP2.78□□□□□ -1.96
CHD4-205ENST00000536301 S100A7L2Q5SY68 101 aa2.78□□□□□ -1.96
CHD4-205ENST00000536301 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
CHD4-205ENST00000536301 COX7B2Q8TF08 81 aa2.78□□□□□ -1.96
CHD4-205ENST00000536301 IGLV9-49A0A0B4J1Y8 123 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 NDUFC2O95298 119 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 PFN2P35080 140 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 NDUFA12Q9UI09 145 aa2.77□□□□□ -1.97
CHD4-205ENST00000536301 TINCRA0A1B0GVN0 87 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 ERC2-IT1O76042 136 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 DNAL4O96015 105 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 TSPEAR-AS2P59090 65 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 LINC00483Q53H64 154 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
CHD4-205ENST00000536301 TRAV13-2A0A0B4J235 113 aa2.75□□□□□ -1.97
CHD4-205ENST00000536301 BAALC-AS2P0C853 105 aa2.75□□□□□ -1.97
CHD4-205ENST00000536301 RPS29P62273 56 aaKnown RBP2.75□□□□□ -1.97
CHD4-205ENST00000536301 HIST1H4AP62805 103 aaKnown RBP2.75□□□□□ -1.97
CHD4-205ENST00000536301 Q6JHZ5 121 aa2.75□□□□□ -1.97
CHD4-205ENST00000536301 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
CHD4-205ENST00000536301 hADV29S1A0JD25 119 aa2.74□□□□□ -1.97
CHD4-205ENST00000536301 H0YGX0 51 aa2.74□□□□□ -1.97
CHD4-205ENST00000536301 SSBP3-AS1Q7Z2R9 100 aa2.74□□□□□ -1.97
CHD4-205ENST00000536301 CLEC2BQ92478 149 aa2.74□□□□□ -1.97
CHD4-205ENST00000536301 ZNF625Q96I27 306 aaPredicted RBP2.74□□□□□ -1.97
CHD4-205ENST00000536301 IGLV5-45A0A087WSX0 123 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 EIF4EBP3O60516 100 aaPredicted RBP2.73□□□□□ -1.97
CHD4-205ENST00000536301 MT2AP02795 61 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 SPRR1AP35321 89 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 NPC2P61916 151 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 LITAFQ99732 161 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 PRO0628Q9UI54 55 aa2.73□□□□□ -1.97
CHD4-205ENST00000536301 TRBV10-3A0A0K0K1G6 114 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 IGLV6-57P01721 117 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 MT1FP04733 61 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 ATP5EP56381 51 aaPredicted RBP2.72□□□□□ -1.97
CHD4-205ENST00000536301 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
CHD4-205ENST00000536301 HRCT1Q6UXD1 115 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 LINC00308Q8TCZ7 52 aa2.72□□□□□ -1.97
CHD4-205ENST00000536301 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms