RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TMEM256-PLSCR3K7ERE1 68 aa6.85□□□□□ -1.31
CDCA3-206ENST00000536241 GHRHP01286 108 aa6.85□□□□□ -1.31
CDCA3-206ENST00000536241 PPDPFLQ8WWR9 84 aa6.85□□□□□ -1.31
CDCA3-206ENST00000536241 A0A087X002 238 aa6.84□□□□□ -1.31
CDCA3-206ENST00000536241 H3BQ85 93 aa6.84□□□□□ -1.31
CDCA3-206ENST00000536241 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
CDCA3-206ENST00000536241 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
CDCA3-206ENST00000536241 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-206ENST00000536241 UBE2V1Q13404 147 aa6.83□□□□□ -1.32
CDCA3-206ENST00000536241 PRO0461Q9UI25 63 aa6.83□□□□□ -1.32
CDCA3-206ENST00000536241 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
CDCA3-206ENST00000536241 CRYGAP11844 174 aa6.82□□□□□ -1.32
CDCA3-206ENST00000536241 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
CDCA3-206ENST00000536241 ANKRD29Q8N6D5 301 aa6.82□□□□□ -1.32
CDCA3-206ENST00000536241 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
CDCA3-206ENST00000536241 KRTAP13-2Q52LG2 175 aa6.81□□□□□ -1.32
CDCA3-206ENST00000536241 FLG2Q5D862 2391 aaPredicted RBP6.8□□□□□ -1.32
CDCA3-206ENST00000536241 A0A1B0GV72 72 aa6.8□□□□□ -1.32
CDCA3-206ENST00000536241 F8W1H4 67 aa6.8□□□□□ -1.32
CDCA3-206ENST00000536241 H3BT86 120 aa6.8□□□□□ -1.32
CDCA3-206ENST00000536241 LINC01600Q96MT4 127 aa6.79□□□□□ -1.32
CDCA3-206ENST00000536241 F8WEM9 126 aa6.79□□□□□ -1.32
CDCA3-206ENST00000536241 MOBPQ13875 183 aa6.79□□□□□ -1.32
CDCA3-206ENST00000536241 C21orf62-AS1Q17RA5 79 aa6.79□□□□□ -1.32
CDCA3-206ENST00000536241 C9orf153Q5TBE3 101 aa6.79□□□□□ -1.32
CDCA3-206ENST00000536241 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
CDCA3-206ENST00000536241 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
CDCA3-206ENST00000536241 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
CDCA3-206ENST00000536241 RBM3P98179 157 aaKnown RBP6.76□□□□□ -1.33
CDCA3-206ENST00000536241 SSBP3-AS1Q7Z2R9 100 aa6.76□□□□□ -1.33
CDCA3-206ENST00000536241 HERC2O95714 4834 aa6.76□□□□□ -1.33
CDCA3-206ENST00000536241 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
CDCA3-206ENST00000536241 Q8NBF4 154 aa6.75□□□□□ -1.33
CDCA3-206ENST00000536241 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
CDCA3-206ENST00000536241 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
CDCA3-206ENST00000536241 OXTP01178 125 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 ETDBQ3ZM63 59 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 IGFL1Q6UW32 110 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 OBSCN-AS1Q96MR7 158 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 Q6JHZ5 121 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 DSCR8Q96T75 97 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 C14orf132Q9NPU4 83 aa6.73□□□□□ -1.33
CDCA3-206ENST00000536241 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.34
CDCA3-206ENST00000536241 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.34
CDCA3-206ENST00000536241 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
CDCA3-206ENST00000536241 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
CDCA3-206ENST00000536241 TEN1Q86WV5 123 aa6.71□□□□□ -1.34
CDCA3-206ENST00000536241 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
CDCA3-206ENST00000536241 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
CDCA3-206ENST00000536241 LINC00304Q8N9R0 145 aa6.68□□□□□ -1.34
CDCA3-206ENST00000536241 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
CDCA3-206ENST00000536241 CCKP06307 115 aa6.67□□□□□ -1.34
CDCA3-206ENST00000536241 Q6ZQT0 140 aa6.67□□□□□ -1.34
CDCA3-206ENST00000536241 VPS25Q9BRG1 176 aa6.67□□□□□ -1.34
CDCA3-206ENST00000536241 PDE6GP18545 87 aa6.66□□□□□ -1.34
CDCA3-206ENST00000536241 J3QL48 77 aa6.65□□□□□ -1.35
CDCA3-206ENST00000536241 CD164Q04900 197 aa6.65□□□□□ -1.35
CDCA3-206ENST00000536241 SPAG11AQ6PDA7 123 aa6.65□□□□□ -1.35
CDCA3-206ENST00000536241 SPINK1P00995 79 aa6.64□□□□□ -1.35
CDCA3-206ENST00000536241 Q6Q795 121 aa6.64□□□□□ -1.35
CDCA3-206ENST00000536241 DMBT1Q9UGM3 2413 aaPredicted RBP6.64□□□□□ -1.35
CDCA3-206ENST00000536241 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
CDCA3-206ENST00000536241 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
CDCA3-206ENST00000536241 TRBV7-7A0A0K0K1E9 115 aa6.63□□□□□ -1.35
CDCA3-206ENST00000536241 MYCBP2O75592 4640 aa6.62□□□□□ -1.35
CDCA3-206ENST00000536241 A0A087WSZ3 146 aa6.61□□□□□ -1.35
CDCA3-206ENST00000536241 TNXBP22105 4242 aa6.58□□□□□ -1.36
CDCA3-206ENST00000536241 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
CDCA3-206ENST00000536241 A0A1B0GW54 56 aa6.57□□□□□ -1.36
CDCA3-206ENST00000536241 Q5XG85 94 aa6.57□□□□□ -1.36
CDCA3-206ENST00000536241 LIMD2Q9BT23 127 aa6.56□□□□□ -1.36
CDCA3-206ENST00000536241 LINC00846Q9NV44 126 aa6.54□□□□□ -1.36
CDCA3-206ENST00000536241 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
CDCA3-206ENST00000536241 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 NREPQ16612 68 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 DEFB116Q30KQ4 102 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
CDCA3-206ENST00000536241 J3QR89 54 aa6.51□□□□□ -1.37
CDCA3-206ENST00000536241 Q96NJ1 140 aa6.51□□□□□ -1.37
CDCA3-206ENST00000536241 LINC00472Q9H8W2 130 aa6.51□□□□□ -1.37
CDCA3-206ENST00000536241 ACYP1P07311 99 aa6.5□□□□□ -1.37
CDCA3-206ENST00000536241 Q6ZVQ6 151 aa6.49□□□□□ -1.37
CDCA3-206ENST00000536241 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
CDCA3-206ENST00000536241 FAM240AA0A1B0GVK7 77 aa6.48□□□□□ -1.37
CDCA3-206ENST00000536241 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
CDCA3-206ENST00000536241 IGKV4-1P06312 121 aa6.47□□□□□ -1.37
CDCA3-206ENST00000536241 K7ERU9 68 aa6.46□□□□□ -1.38
CDCA3-206ENST00000536241 PRR4Q16378 134 aa6.45□□□□□ -1.38
CDCA3-206ENST00000536241 BPY2O14599 106 aa6.43□□□□□ -1.38
CDCA3-206ENST00000536241 SIGMAR1Q99720 223 aa6.43□□□□□ -1.38
CDCA3-206ENST00000536241 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
CDCA3-206ENST00000536241 J3KT08 172 aa6.42□□□□□ -1.38
CDCA3-206ENST00000536241 FP248Q71RG6 208 aaPredicted RBP6.42□□□□□ -1.38
CDCA3-206ENST00000536241 DSCR10P59022 87 aa6.41□□□□□ -1.38
CDCA3-206ENST00000536241 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
CDCA3-206ENST00000536241 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 279 ms