RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
CHD4-203ENST00000535717 LST1O00453 97 aa7.27□□□□□ -1.25
CHD4-203ENST00000535717 TRAV23DV6A0A075B6W5 121 aa7.26□□□□□ -1.25
CHD4-203ENST00000535717 ETDCA0A1B0GVM5 59 aa7.26□□□□□ -1.25
CHD4-203ENST00000535717 J3KT08 172 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 J3QL48 77 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 COX6CP09669 75 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
CHD4-203ENST00000535717 ZNF73O43830 326 aaPredicted RBP7.24□□□□□ -1.25
CHD4-203ENST00000535717 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
CHD4-203ENST00000535717 TNXBP22105 4242 aa7.24□□□□□ -1.25
CHD4-203ENST00000535717 TRIAP1O43715 76 aa7.23□□□□□ -1.25
CHD4-203ENST00000535717 CRYGAP11844 174 aa7.23□□□□□ -1.25
CHD4-203ENST00000535717 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
CHD4-203ENST00000535717 TRAV13-2A0A0B4J235 113 aa7.22□□□□□ -1.25
CHD4-203ENST00000535717 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
CHD4-203ENST00000535717 HIST1H4AP62805 103 aaKnown RBP7.22□□□□□ -1.25
CHD4-203ENST00000535717 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
CHD4-203ENST00000535717 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
CHD4-203ENST00000535717 Q6ZRX8 168 aa7.21□□□□□ -1.26
CHD4-203ENST00000535717 SMCR5Q8TEV8 140 aa7.21□□□□□ -1.26
CHD4-203ENST00000535717 Q9BRP9 147 aa7.21□□□□□ -1.26
CHD4-203ENST00000535717 HERC1Q15751 4861 aa7.21□□□□□ -1.26
CHD4-203ENST00000535717 ATOX1O00244 68 aa7.2□□□□□ -1.26
CHD4-203ENST00000535717 COX7CP15954 63 aa7.2□□□□□ -1.26
CHD4-203ENST00000535717 Q1RN00 199 aa7.2□□□□□ -1.26
CHD4-203ENST00000535717 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
CHD4-203ENST00000535717 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
CHD4-203ENST00000535717 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
CHD4-203ENST00000535717 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
CHD4-203ENST00000535717 C6orf99Q4VX62 202 aa7.19□□□□□ -1.26
CHD4-203ENST00000535717 ANAPC11Q9NYG5 84 aa7.19□□□□□ -1.26
CHD4-203ENST00000535717 H7C2G1 150 aa7.18□□□□□ -1.26
CHD4-203ENST00000535717 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
CHD4-203ENST00000535717 TRACP01848 142 aa7.18□□□□□ -1.26
CHD4-203ENST00000535717 TMEM258P61165 79 aa7.18□□□□□ -1.26
CHD4-203ENST00000535717 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
CHD4-203ENST00000535717 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
CHD4-203ENST00000535717 A0A087X002 238 aa7.16□□□□□ -1.26
CHD4-203ENST00000535717 TRBV7-6A0A0J9YX20 115 aa7.16□□□□□ -1.26
CHD4-203ENST00000535717 COX7BP24311 80 aa7.16□□□□□ -1.26
CHD4-203ENST00000535717 ELOF1P60002 83 aaKnown RBP7.16□□□□□ -1.26
CHD4-203ENST00000535717 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
CHD4-203ENST00000535717 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
CHD4-203ENST00000535717 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
CHD4-203ENST00000535717 DHRS4-AS1Q9P1J3 65 aa7.13□□□□□ -1.27
CHD4-203ENST00000535717 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
CHD4-203ENST00000535717 ST20-AS1Q8NBB2 130 aa7.12□□□□□ -1.27
CHD4-203ENST00000535717 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
CHD4-203ENST00000535717 Q6JHZ5 121 aa7.11□□□□□ -1.27
CHD4-203ENST00000535717 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
CHD4-203ENST00000535717 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
CHD4-203ENST00000535717 CLEC2BQ92478 149 aa7.08□□□□□ -1.28
CHD4-203ENST00000535717 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
CHD4-203ENST00000535717 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
CHD4-203ENST00000535717 H0YGX0 51 aa7.06□□□□□ -1.28
CHD4-203ENST00000535717 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
CHD4-203ENST00000535717 OBSCN-AS1Q96MR7 158 aa7.06□□□□□ -1.28
CHD4-203ENST00000535717 SPRR1BP22528 89 aa7.05□□□□□ -1.28
CHD4-203ENST00000535717 DEFB105AQ8NG35 78 aa7.04□□□□□ -1.28
CHD4-203ENST00000535717 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
CHD4-203ENST00000535717 IGLV9-49A0A0B4J1Y8 123 aa7.03□□□□□ -1.28
CHD4-203ENST00000535717 hADV29S1A0JD25 119 aa7.03□□□□□ -1.28
CHD4-203ENST00000535717 LINC01547P58512 204 aaPredicted RBP7.03□□□□□ -1.28
CHD4-203ENST00000535717 MOBPQ13875 183 aa7.02□□□□□ -1.29
CHD4-203ENST00000535717 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
CHD4-203ENST00000535717 FAM218AQ96MZ4 157 aa7.01□□□□□ -1.29
CHD4-203ENST00000535717 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
CHD4-203ENST00000535717 BAALC-AS2P0C853 105 aa7□□□□□ -1.29
CHD4-203ENST00000535717 Q6ZQY7 126 aa7□□□□□ -1.29
CHD4-203ENST00000535717 Q8N377 158 aa7□□□□□ -1.29
CHD4-203ENST00000535717 Q8NBF4 154 aa7□□□□□ -1.29
CHD4-203ENST00000535717 DNAL4O96015 105 aa6.99□□□□□ -1.29
CHD4-203ENST00000535717 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
CHD4-203ENST00000535717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
CHD4-203ENST00000535717 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
CHD4-203ENST00000535717 SMIM29Q86T20 159 aa6.99□□□□□ -1.29
CHD4-203ENST00000535717 LAMTOR3Q9UHA4 124 aa6.99□□□□□ -1.29
CHD4-203ENST00000535717 Q5XG85 94 aa6.98□□□□□ -1.29
CHD4-203ENST00000535717 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
CHD4-203ENST00000535717 SERP1Q9Y6X1 66 aa6.94□□□□□ -1.3
CHD4-203ENST00000535717 ATP5EP56381 51 aaPredicted RBP6.93□□□□□ -1.3
CHD4-203ENST00000535717 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
CHD4-203ENST00000535717 SPINK1P00995 79 aa6.92□□□□□ -1.3
CHD4-203ENST00000535717 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
CHD4-203ENST00000535717 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
CHD4-203ENST00000535717 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
CHD4-203ENST00000535717 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
CHD4-203ENST00000535717 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
CHD4-203ENST00000535717 ORMDL1Q9P0S3 153 aa6.91□□□□□ -1.3
CHD4-203ENST00000535717 A0A0G2JQZ4 141 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 F8WEM9 126 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 H3BQ85 93 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 GHRHP01286 108 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 CCKP06307 115 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 LINC00846Q9NV44 126 aa6.9□□□□□ -1.3
CHD4-203ENST00000535717 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
CHD4-203ENST00000535717 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms