RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RNASE7Q9H1E1 156 aaKnown RBP1.47□□□□□ -2.17
SNHG1-202ENST00000535689 MED9Q9NWA0 146 aa1.47□□□□□ -2.17
SNHG1-202ENST00000535689 C9orf92A6NGG3 77 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 HMSDA8MTL9 139 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 F8W036 122 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 K7EMI3 77 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 M0R378 163 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 CKS2P33552 79 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 HINT1P49773 126 aaPredicted RBP1.46□□□□□ -2.18
SNHG1-202ENST00000535689 TSPEAR-AS2P59090 65 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 DEFA1P59665 94 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 RPL37P61927 97 aaKnown RBP1.46□□□□□ -2.18
SNHG1-202ENST00000535689 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
SNHG1-202ENST00000535689 RPL7L1Q6DKI1 246 aaKnown RBP1.46□□□□□ -2.18
SNHG1-202ENST00000535689 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 H3BRM9 83 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 RPL39P62891 51 aaKnown RBP1.45□□□□□ -2.18
SNHG1-202ENST00000535689 IFITM2Q01629 132 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 PMAIP1Q13794 54 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 C9orf153Q5TBE3 101 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 Q8NDZ9 215 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 FAM213BQ8TBF2 198 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 COX7B2Q8TF08 81 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 GNG13Q9P2W3 67 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 CYSLTR1Q9Y271 337 aa1.45□□□□□ -2.18
SNHG1-202ENST00000535689 FXYD6-FXYD2A0A087WZ82 144 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 HIGD1CA8MV81 97 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 TMEM238C9JI98 176 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 H3BPC8 53 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 TCL1BO95988 128 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 ZNF22P17026 224 aaPredicted RBP1.44□□□□□ -2.18
SNHG1-202ENST00000535689 RAB14P61106 215 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 Q5BKY6 102 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 ALKAL2Q6UX46 152 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 AMELXQ99217 191 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 SMIM2Q9BVW6 85 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 LAMTOR3Q9UHA4 124 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 NAT8BQ9UHF3 227 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 LAMTOR2Q9Y2Q5 125 aa1.44□□□□□ -2.18
SNHG1-202ENST00000535689 USH2AO75445 5202 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 FAM236DA0A1B0GTK5 79 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 KANTRA0A1W2PQU2 76 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 H7C2G1 150 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 SRP19P09132 144 aaKnown RBP1.43□□□□□ -2.18
SNHG1-202ENST00000535689 FAM236CP0DP71 79 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 AKR1D1P51857 326 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 HIST1H4AP62805 103 aaKnown RBP1.43□□□□□ -2.18
SNHG1-202ENST00000535689 Q5XG85 94 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 PRO1933Q9H354 126 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 OSTCQ9NRP0 149 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
SNHG1-202ENST00000535689 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
SNHG1-202ENST00000535689 LST1O00453 97 aa1.42□□□□□ -2.18
SNHG1-202ENST00000535689 SPRR1AP35321 89 aa1.42□□□□□ -2.18
SNHG1-202ENST00000535689 LINC00158P58513 81 aa1.42□□□□□ -2.18
SNHG1-202ENST00000535689 ERG28Q9UKR5 140 aa1.42□□□□□ -2.18
SNHG1-202ENST00000535689 ZNF345Q14585 488 aa1.41□□□□□ -2.18
SNHG1-202ENST00000535689 C2orf91Q6ZV80 131 aa1.41□□□□□ -2.18
SNHG1-202ENST00000535689 Q8N8P6 123 aa1.41□□□□□ -2.18
SNHG1-202ENST00000535689 PRELID3AQ96N28 172 aa1.41□□□□□ -2.18
SNHG1-202ENST00000535689 NXT2Q9NPJ8 142 aaKnown RBP1.41□□□□□ -2.18
SNHG1-202ENST00000535689 TRBV10-2A0A0K0K1G8 114 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 IGIPA6NJ69 53 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 ZNF815PA8K554 130 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 A8MUN3 132 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 D6R8Y8 96 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 ARPC5O15511 151 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 MT2AP02795 61 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 HRCT1Q6UXD1 115 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 Q6ZRX8 168 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 SCGB3A1Q96QR1 104 aa1.4□□□□□ -2.19
SNHG1-202ENST00000535689 LOC107984156A0A0G2JMH3 177 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 SMIM27A0A1W2PRY6 76 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 ARL17AQ8IVW1 177 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 TOMM6Q96B49 74 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 SMIM7Q9BQ49 75 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 Q9BRP9 147 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 KRTAP2-1Q9BYU5 128 aa1.39□□□□□ -2.19
SNHG1-202ENST00000535689 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 SPINK8P0C7L1 97 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 SPRR1BP22528 89 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BOP23527 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BBP33778 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 NDUFA6P56556 154 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BDP58876 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BCP62807 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST2H2BEQ16778 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 MEIG1Q5JSS6 88 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.38□□□□□ -2.19
SNHG1-202ENST00000535689 MRPL54Q6P161 138 aaKnown RBP1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BHQ93079 126 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 ZNF625Q96I27 306 aaPredicted RBP1.38□□□□□ -2.19
SNHG1-202ENST00000535689 SIGMAR1Q99720 223 aa1.38□□□□□ -2.19
SNHG1-202ENST00000535689 HIST1H2BNQ99877 126 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms