RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
HDAC4-214ENST00000535493 DNAH9Q9NYC9 4486 aa8.5□□□□□ -1.05
HDAC4-214ENST00000535493 A0A087WSZ3 146 aa8.5□□□□□ -1.05
HDAC4-214ENST00000535493 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
HDAC4-214ENST00000535493 DNAH10OSP0CZ25 163 aa8.49□□□□□ -1.05
HDAC4-214ENST00000535493 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
HDAC4-214ENST00000535493 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
HDAC4-214ENST00000535493 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
HDAC4-214ENST00000535493 A0A096LNI7 61 aa8.47□□□□□ -1.05
HDAC4-214ENST00000535493 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
HDAC4-214ENST00000535493 LCE6AA0A183 80 aa8.47□□□□□ -1.05
HDAC4-214ENST00000535493 DNAH7Q8WXX0 4024 aa8.45□□□□□ -1.06
HDAC4-214ENST00000535493 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
HDAC4-214ENST00000535493 LINC00208Q96KT6 92 aa8.45□□□□□ -1.06
HDAC4-214ENST00000535493 HUWE1Q7Z6Z7 4374 aaKnown RBP8.44□□□□□ -1.06
HDAC4-214ENST00000535493 C1orf195Q5TG92 126 aa8.44□□□□□ -1.06
HDAC4-214ENST00000535493 A8MU10 97 aa8.44□□□□□ -1.06
HDAC4-214ENST00000535493 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
HDAC4-214ENST00000535493 F8WDY8 70 aa8.43□□□□□ -1.06
HDAC4-214ENST00000535493 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
HDAC4-214ENST00000535493 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
HDAC4-214ENST00000535493 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
HDAC4-214ENST00000535493 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
HDAC4-214ENST00000535493 A0A1B0GW54 56 aa8.4□□□□□ -1.06
HDAC4-214ENST00000535493 A8MUN3 132 aa8.39□□□□□ -1.07
HDAC4-214ENST00000535493 UBE2AP49459 152 aa8.38□□□□□ -1.07
HDAC4-214ENST00000535493 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
HDAC4-214ENST00000535493 PHF5AQ7RTV0 110 aaKnown RBP8.37□□□□□ -1.07
HDAC4-214ENST00000535493 MP68P56378 58 aa8.37□□□□□ -1.07
HDAC4-214ENST00000535493 Q1T7F1 81 aa8.37□□□□□ -1.07
HDAC4-214ENST00000535493 H0Y9P7 68 aa8.34□□□□□ -1.07
HDAC4-214ENST00000535493 CASC2Q6XLA1 102 aa8.34□□□□□ -1.07
HDAC4-214ENST00000535493 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
HDAC4-214ENST00000535493 KRTAP24-1Q3LI83 254 aa8.33□□□□□ -1.08
HDAC4-214ENST00000535493 CNBPP62633 177 aaKnown RBP8.33□□□□□ -1.08
HDAC4-214ENST00000535493 B9D2Q9BPU9 175 aa8.33□□□□□ -1.08
HDAC4-214ENST00000535493 KRTAP29-1A8MX34 341 aaPredicted RBP8.32□□□□□ -1.08
HDAC4-214ENST00000535493 H0Y9J4 135 aa8.32□□□□□ -1.08
HDAC4-214ENST00000535493 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
HDAC4-214ENST00000535493 V9GYY9 64 aa8.31□□□□□ -1.08
HDAC4-214ENST00000535493 C16orf90A8MZG2 172 aa8.3□□□□□ -1.08
HDAC4-214ENST00000535493 PRR15Q8IV56 129 aa8.3□□□□□ -1.08
HDAC4-214ENST00000535493 NDUFB1O75438 58 aa8.29□□□□□ -1.08
HDAC4-214ENST00000535493 SEC61GP60059 68 aa8.27□□□□□ -1.09
HDAC4-214ENST00000535493 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
HDAC4-214ENST00000535493 Q5VV11 94 aa8.26□□□□□ -1.09
HDAC4-214ENST00000535493 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
HDAC4-214ENST00000535493 LINC00472Q9H8W2 130 aa8.26□□□□□ -1.09
HDAC4-214ENST00000535493 PANO1I0J062 215 aa8.25□□□□□ -1.09
HDAC4-214ENST00000535493 PLECQ15149 4684 aaKnown RBP8.25□□□□□ -1.09
HDAC4-214ENST00000535493 A8MWP4 228 aa8.24□□□□□ -1.09
HDAC4-214ENST00000535493 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
HDAC4-214ENST00000535493 IGLV9-49A0A0B4J1Y8 123 aa8.24□□□□□ -1.09
HDAC4-214ENST00000535493 PRR15LQ9BU68 103 aa8.23□□□□□ -1.09
HDAC4-214ENST00000535493 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
HDAC4-214ENST00000535493 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
HDAC4-214ENST00000535493 K7EIL1 84 aa8.21□□□□□ -1.1
HDAC4-214ENST00000535493 UBE2DNLQ8IWF7 75 aa8.2□□□□□ -1.1
HDAC4-214ENST00000535493 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
HDAC4-214ENST00000535493 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
HDAC4-214ENST00000535493 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
HDAC4-214ENST00000535493 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
HDAC4-214ENST00000535493 COA5Q86WW8 74 aa8.17□□□□□ -1.1
HDAC4-214ENST00000535493 NDUFS5O43920 106 aa8.17□□□□□ -1.1
HDAC4-214ENST00000535493 SPANXA2-OT1Q8N9U9 137 aa8.16□□□□□ -1.1
HDAC4-214ENST00000535493 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.11
HDAC4-214ENST00000535493 CD164Q04900 197 aa8.15□□□□□ -1.11
HDAC4-214ENST00000535493 SPAG11AQ6PDA7 123 aa8.15□□□□□ -1.11
HDAC4-214ENST00000535493 TGP01266 2768 aa8.14□□□□□ -1.11
HDAC4-214ENST00000535493 SPRR1BP22528 89 aa8.14□□□□□ -1.11
HDAC4-214ENST00000535493 DNAH8Q96JB1 4490 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 A0A087X002 238 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 A6NED7 52 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 LCA10Q71F78 164 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 Q96NJ1 140 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 KMT2AQ03164 3969 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 MOBPQ13875 183 aa8.12□□□□□ -1.11
HDAC4-214ENST00000535493 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
HDAC4-214ENST00000535493 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
HDAC4-214ENST00000535493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
HDAC4-214ENST00000535493 H3BPC8 53 aa8.1□□□□□ -1.11
HDAC4-214ENST00000535493 IGLV7-46A0A075B6I9 117 aa8.09□□□□□ -1.11
HDAC4-214ENST00000535493 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
HDAC4-214ENST00000535493 STARD9Q9P2P6 4700 aa8.07□□□□□ -1.12
HDAC4-214ENST00000535493 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
HDAC4-214ENST00000535493 APLNQ9ULZ1 77 aa8.06□□□□□ -1.12
HDAC4-214ENST00000535493 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
HDAC4-214ENST00000535493 DNAH17Q9UFH2 4485 aa8.04□□□□□ -1.12
HDAC4-214ENST00000535493 C14orf177Q52M58 125 aa8.04□□□□□ -1.12
HDAC4-214ENST00000535493 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
HDAC4-214ENST00000535493 DNAH2Q9P225 4427 aa8.02□□□□□ -1.13
HDAC4-214ENST00000535493 HRES1P13985 223 aa8.02□□□□□ -1.13
HDAC4-214ENST00000535493 Q75L30 129 aa8.02□□□□□ -1.13
HDAC4-214ENST00000535493 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
HDAC4-214ENST00000535493 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
HDAC4-214ENST00000535493 SPINK7P58062 85 aa8.01□□□□□ -1.13
HDAC4-214ENST00000535493 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
HDAC4-214ENST00000535493 NBDYA0A0U1RRE5 68 aa8□□□□□ -1.13
HDAC4-214ENST00000535493 CDK2AP2O75956 126 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms