RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 Q6JHZ5 121 aa11.57□□□□□ -0.56
GSDMD-216ENST00000534602 BVES-AS1Q5T3Y7 98 aa11.53□□□□□ -0.56
GSDMD-216ENST00000534602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.53□□□□□ -0.56
GSDMD-216ENST00000534602 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
GSDMD-216ENST00000534602 HIST1H4GQ99525 98 aa11.53□□□□□ -0.56
GSDMD-216ENST00000534602 SCGB1D1O95968 90 aa11.52□□□□□ -0.57
GSDMD-216ENST00000534602 RPL37P61927 97 aaKnown RBP11.52□□□□□ -0.57
GSDMD-216ENST00000534602 CLEC2BQ92478 149 aa11.52□□□□□ -0.57
GSDMD-216ENST00000534602 KRTAP9-6A0A140TA67 174 aa11.51□□□□□ -0.57
GSDMD-216ENST00000534602 COX8AP10176 69 aa11.51□□□□□ -0.57
GSDMD-216ENST00000534602 OCIAD2Q56VL3 154 aa11.51□□□□□ -0.57
GSDMD-216ENST00000534602 DLEU1O43261 78 aa11.5□□□□□ -0.57
GSDMD-216ENST00000534602 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
GSDMD-216ENST00000534602 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
GSDMD-216ENST00000534602 IGFL1Q6UW32 110 aa11.49□□□□□ -0.57
GSDMD-216ENST00000534602 C12orf57Q99622 126 aa11.48□□□□□ -0.57
GSDMD-216ENST00000534602 MT1HP80294 61 aa11.45□□□□□ -0.58
GSDMD-216ENST00000534602 SNHG12Q9BXW3 62 aa11.45□□□□□ -0.58
GSDMD-216ENST00000534602 CFC1BP0CG36 223 aa11.41□□□□□ -0.58
GSDMD-216ENST00000534602 CFC1P0CG37 223 aa11.41□□□□□ -0.58
GSDMD-216ENST00000534602 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
GSDMD-216ENST00000534602 SNCGO76070 127 aa11.39□□□□□ -0.59
GSDMD-216ENST00000534602 H0YGX0 51 aa11.38□□□□□ -0.59
GSDMD-216ENST00000534602 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
GSDMD-216ENST00000534602 C14orf144Q96I85 54 aa11.38□□□□□ -0.59
GSDMD-216ENST00000534602 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
GSDMD-216ENST00000534602 H3BUT2 72 aa11.35□□□□□ -0.59
GSDMD-216ENST00000534602 LST1O00453 97 aa11.34□□□□□ -0.59
GSDMD-216ENST00000534602 Q6Q795 121 aa11.34□□□□□ -0.59
GSDMD-216ENST00000534602 SPATA45Q537H7 98 aa11.33□□□□□ -0.6
GSDMD-216ENST00000534602 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
GSDMD-216ENST00000534602 Q75L30 129 aa11.32□□□□□ -0.6
GSDMD-216ENST00000534602 OBSCN-AS1Q96MR7 158 aa11.32□□□□□ -0.6
GSDMD-216ENST00000534602 SS18L2Q9UHA2 77 aa11.32□□□□□ -0.6
GSDMD-216ENST00000534602 C2orf91Q6ZV80 131 aa11.31□□□□□ -0.6
GSDMD-216ENST00000534602 GHRHP01286 108 aa11.3□□□□□ -0.6
GSDMD-216ENST00000534602 FAM218AQ96MZ4 157 aa11.3□□□□□ -0.6
GSDMD-216ENST00000534602 VAMP8Q9BV40 100 aa11.3□□□□□ -0.6
GSDMD-216ENST00000534602 A0A1B0GX51 115 aa11.29□□□□□ -0.6
GSDMD-216ENST00000534602 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
GSDMD-216ENST00000534602 COX6B2Q6YFQ2 88 aa11.29□□□□□ -0.6
GSDMD-216ENST00000534602 ATP11AUNQ6ZP68 121 aa11.29□□□□□ -0.6
GSDMD-216ENST00000534602 TEN1Q86WV5 123 aa11.29□□□□□ -0.6
GSDMD-216ENST00000534602 LORP23490 312 aaPredicted RBP11.27□□□□□ -0.61
GSDMD-216ENST00000534602 CEND1Q8N111 149 aa11.27□□□□□ -0.61
GSDMD-216ENST00000534602 PRO1854Q9UHT4 67 aa11.27□□□□□ -0.61
GSDMD-216ENST00000534602 TMEM238LA0A1B0GVL6 79 aa11.26□□□□□ -0.61
GSDMD-216ENST00000534602 A6NJY4 79 aa11.26□□□□□ -0.61
GSDMD-216ENST00000534602 KRTAP10-6P60371 365 aaPredicted RBP11.25□□□□□ -0.61
GSDMD-216ENST00000534602 FSIP2Q5CZC0 6907 aa11.24□□□□□ -0.61
GSDMD-216ENST00000534602 M0R2T5 61 aa11.23□□□□□ -0.61
GSDMD-216ENST00000534602 H3BMG7 143 aa11.22□□□□□ -0.61
GSDMD-216ENST00000534602 Q96NJ1 140 aa11.21□□□□□ -0.61
GSDMD-216ENST00000534602 CRCT1Q9UGL9 99 aa11.21□□□□□ -0.61
GSDMD-216ENST00000534602 A0A087WSZ3 146 aa11.19□□□□□ -0.62
GSDMD-216ENST00000534602 FABP2P12104 132 aa11.19□□□□□ -0.62
GSDMD-216ENST00000534602 FXYD2P54710 66 aa11.18□□□□□ -0.62
GSDMD-216ENST00000534602 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
GSDMD-216ENST00000534602 FLGP20930 4061 aaPredicted RBP11.17□□□□□ -0.62
GSDMD-216ENST00000534602 TRIAP1O43715 76 aa11.16□□□□□ -0.62
GSDMD-216ENST00000534602 A8MUU9 505 aa11.15□□□□□ -0.62
GSDMD-216ENST00000534602 H3BQ85 93 aa11.13□□□□□ -0.63
GSDMD-216ENST00000534602 A0A1W2PNM2 257 aa11.12□□□□□ -0.63
GSDMD-216ENST00000534602 DNAL4O96015 105 aa11.1□□□□□ -0.63
GSDMD-216ENST00000534602 HSD52Q0P140 79 aa11.1□□□□□ -0.63
GSDMD-216ENST00000534602 ORMDL1Q9P0S3 153 aa11.09□□□□□ -0.63
GSDMD-216ENST00000534602 TRBV7-4A0A0J9YYF1 115 aa11.08□□□□□ -0.64
GSDMD-216ENST00000534602 ANKRD29Q8N6D5 301 aa11.08□□□□□ -0.64
GSDMD-216ENST00000534602 COX6CP09669 75 aa11.06□□□□□ -0.64
GSDMD-216ENST00000534602 PSMB2P49721 201 aa11.06□□□□□ -0.64
GSDMD-216ENST00000534602 PYY3Q5JQD4 70 aa11.06□□□□□ -0.64
GSDMD-216ENST00000534602 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
GSDMD-216ENST00000534602 DSCR10P59022 87 aa11.04□□□□□ -0.64
GSDMD-216ENST00000534602 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
GSDMD-216ENST00000534602 K7ERJ3 54 aa11.02□□□□□ -0.65
GSDMD-216ENST00000534602 LINC00313P59037 77 aa11.01□□□□□ -0.65
GSDMD-216ENST00000534602 TRBV20-1A0A075B6N2 111 aa11□□□□□ -0.65
GSDMD-216ENST00000534602 IGKV4-1P06312 121 aa11□□□□□ -0.65
GSDMD-216ENST00000534602 UBE2V1Q13404 147 aa10.98□□□□□ -0.65
GSDMD-216ENST00000534602 LINC00472Q9H8W2 130 aa10.97□□□□□ -0.65
GSDMD-216ENST00000534602 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
GSDMD-216ENST00000534602 A0A1B0GV72 72 aa10.96□□□□□ -0.65
GSDMD-216ENST00000534602 CCKP06307 115 aa10.96□□□□□ -0.65
GSDMD-216ENST00000534602 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
GSDMD-216ENST00000534602 TRACP01848 142 aa10.95□□□□□ -0.66
GSDMD-216ENST00000534602 DEFB116Q30KQ4 102 aa10.89□□□□□ -0.67
GSDMD-216ENST00000534602 NOTCH2NLQ7Z3S9 236 aa10.89□□□□□ -0.67
GSDMD-216ENST00000534602 SCGB1C2P0DMR2 95 aa10.87□□□□□ -0.67
GSDMD-216ENST00000534602 RBM3P98179 157 aaKnown RBP10.87□□□□□ -0.67
GSDMD-216ENST00000534602 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
GSDMD-216ENST00000534602 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
GSDMD-216ENST00000534602 C21orf62-AS1Q17RA5 79 aa10.84□□□□□ -0.67
GSDMD-216ENST00000534602 KRTAP9-8Q9BYQ0 159 aa10.83□□□□□ -0.68
GSDMD-216ENST00000534602 C8orf87E5RJ46 101 aa10.82□□□□□ -0.68
GSDMD-216ENST00000534602 VPS25Q9BRG1 176 aa10.82□□□□□ -0.68
GSDMD-216ENST00000534602 A0A1B0GVX0 72 aa10.8□□□□□ -0.68
GSDMD-216ENST00000534602 MPLKIPQ8TAP9 179 aa10.8□□□□□ -0.68
GSDMD-216ENST00000534602 TMA7Q9Y2S6 64 aaKnown RBP10.8□□□□□ -0.68
GSDMD-216ENST00000534602 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
GSDMD-216ENST00000534602 RBM12B-AS1Q9P1G2 102 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms