RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LIMD2Q9BT23 127 aa7.75□□□□□ -1.17
SF3B2-215ENST00000534307 UQCR10Q9UDW1 63 aa7.75□□□□□ -1.17
SF3B2-215ENST00000534307 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
SF3B2-215ENST00000534307 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
SF3B2-215ENST00000534307 SMIM6P0DI80 62 aa7.73□□□□□ -1.17
SF3B2-215ENST00000534307 CEND1Q8N111 149 aa7.73□□□□□ -1.17
SF3B2-215ENST00000534307 NHP2Q9NX24 153 aaKnown RBP7.73□□□□□ -1.17
SF3B2-215ENST00000534307 Q5XG85 94 aa7.72□□□□□ -1.17
SF3B2-215ENST00000534307 RAB37Q96AX2 223 aa7.72□□□□□ -1.17
SF3B2-215ENST00000534307 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
SF3B2-215ENST00000534307 HSD52Q0P140 79 aa7.71□□□□□ -1.18
SF3B2-215ENST00000534307 BVES-AS1Q5T3Y7 98 aa7.7□□□□□ -1.18
SF3B2-215ENST00000534307 C12orf57Q99622 126 aa7.7□□□□□ -1.18
SF3B2-215ENST00000534307 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
SF3B2-215ENST00000534307 H7C2G1 150 aa7.69□□□□□ -1.18
SF3B2-215ENST00000534307 CFC1BP0CG36 223 aa7.69□□□□□ -1.18
SF3B2-215ENST00000534307 CFC1P0CG37 223 aa7.69□□□□□ -1.18
SF3B2-215ENST00000534307 LINC00575Q6W349 94 aa7.69□□□□□ -1.18
SF3B2-215ENST00000534307 SNCGO76070 127 aa7.66□□□□□ -1.18
SF3B2-215ENST00000534307 C1orf195Q5TG92 126 aa7.66□□□□□ -1.18
SF3B2-215ENST00000534307 PRO1854Q9UHT4 67 aa7.66□□□□□ -1.18
SF3B2-215ENST00000534307 FXYD2P54710 66 aa7.64□□□□□ -1.19
SF3B2-215ENST00000534307 Q6ZQY7 126 aa7.64□□□□□ -1.19
SF3B2-215ENST00000534307 LOC105371267A0A1B0GV96 52 aa7.63□□□□□ -1.19
SF3B2-215ENST00000534307 hADV29S1A0JD25 119 aa7.63□□□□□ -1.19
SF3B2-215ENST00000534307 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
SF3B2-215ENST00000534307 H0YGX0 51 aa7.63□□□□□ -1.19
SF3B2-215ENST00000534307 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
SF3B2-215ENST00000534307 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
SF3B2-215ENST00000534307 F8WEM9 126 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 M0R143 59 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 GHRHP01286 108 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 PCOTHQ58A44 107 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.59□□□□□ -1.19
SF3B2-215ENST00000534307 PPDPFLQ8WWR9 84 aa7.59□□□□□ -1.19
SF3B2-215ENST00000534307 A0A1B0GX51 115 aa7.58□□□□□ -1.2
SF3B2-215ENST00000534307 COX6CP09669 75 aa7.58□□□□□ -1.2
SF3B2-215ENST00000534307 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
SF3B2-215ENST00000534307 Q6JHZ5 121 aa7.58□□□□□ -1.2
SF3B2-215ENST00000534307 OCIAD2Q56VL3 154 aa7.57□□□□□ -1.2
SF3B2-215ENST00000534307 IGFL1Q6UW32 110 aa7.57□□□□□ -1.2
SF3B2-215ENST00000534307 CLEC2BQ92478 149 aa7.57□□□□□ -1.2
SF3B2-215ENST00000534307 FAM218AQ96MZ4 157 aa7.57□□□□□ -1.2
SF3B2-215ENST00000534307 TCL1BO95988 128 aa7.56□□□□□ -1.2
SF3B2-215ENST00000534307 TRBV7-7A0A0K0K1E9 115 aa7.55□□□□□ -1.2
SF3B2-215ENST00000534307 PSMB2P49721 201 aa7.55□□□□□ -1.2
SF3B2-215ENST00000534307 K7ERJ3 54 aa7.53□□□□□ -1.2
SF3B2-215ENST00000534307 TRIAP1O43715 76 aa7.53□□□□□ -1.2
SF3B2-215ENST00000534307 RPL37P61927 97 aaKnown RBP7.52□□□□□ -1.21
SF3B2-215ENST00000534307 H3BQ85 93 aa7.51□□□□□ -1.21
SF3B2-215ENST00000534307 H3BUT2 72 aa7.5□□□□□ -1.21
SF3B2-215ENST00000534307 DNAL4O96015 105 aa7.5□□□□□ -1.21
SF3B2-215ENST00000534307 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
SF3B2-215ENST00000534307 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
SF3B2-215ENST00000534307 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
SF3B2-215ENST00000534307 MT1HP80294 61 aa7.46□□□□□ -1.22
SF3B2-215ENST00000534307 Q6Q795 121 aa7.46□□□□□ -1.22
SF3B2-215ENST00000534307 ORMDL1Q9P0S3 153 aa7.45□□□□□ -1.22
SF3B2-215ENST00000534307 TRACP01848 142 aa7.44□□□□□ -1.22
SF3B2-215ENST00000534307 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
SF3B2-215ENST00000534307 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
SF3B2-215ENST00000534307 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
SF3B2-215ENST00000534307 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
SF3B2-215ENST00000534307 LST1O00453 97 aa7.42□□□□□ -1.22
SF3B2-215ENST00000534307 FABP2P12104 132 aa7.42□□□□□ -1.22
SF3B2-215ENST00000534307 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
SF3B2-215ENST00000534307 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
SF3B2-215ENST00000534307 OBSCN-AS1Q96MR7 158 aa7.41□□□□□ -1.22
SF3B2-215ENST00000534307 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
SF3B2-215ENST00000534307 BATFQ16520 125 aa7.4□□□□□ -1.22
SF3B2-215ENST00000534307 Q75L30 129 aa7.4□□□□□ -1.22
SF3B2-215ENST00000534307 H3BMG7 143 aa7.39□□□□□ -1.23
SF3B2-215ENST00000534307 SS18L2Q9UHA2 77 aa7.39□□□□□ -1.23
SF3B2-215ENST00000534307 ATXN8Q156A1 80 aa7.38□□□□□ -1.23
SF3B2-215ENST00000534307 SSPOA2VEC9 5147 aa7.38□□□□□ -1.23
SF3B2-215ENST00000534307 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
SF3B2-215ENST00000534307 A0A087WSZ3 146 aa7.37□□□□□ -1.23
SF3B2-215ENST00000534307 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
SF3B2-215ENST00000534307 UBE2V1Q13404 147 aa7.37□□□□□ -1.23
SF3B2-215ENST00000534307 Q96NJ1 140 aa7.37□□□□□ -1.23
SF3B2-215ENST00000534307 A0A1W2PNM2 257 aa7.36□□□□□ -1.23
SF3B2-215ENST00000534307 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
SF3B2-215ENST00000534307 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
SF3B2-215ENST00000534307 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
SF3B2-215ENST00000534307 ATP11AUNQ6ZP68 121 aa7.32□□□□□ -1.24
SF3B2-215ENST00000534307 ANKRD29Q8N6D5 301 aa7.32□□□□□ -1.24
SF3B2-215ENST00000534307 NAA38Q9BRA0 125 aaKnown RBP7.32□□□□□ -1.24
SF3B2-215ENST00000534307 USH2AO75445 5202 aa7.32□□□□□ -1.24
SF3B2-215ENST00000534307 A8MUU9 505 aa7.31□□□□□ -1.24
SF3B2-215ENST00000534307 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
SF3B2-215ENST00000534307 TAX1BP3O14907 124 aa7.3□□□□□ -1.24
SF3B2-215ENST00000534307 COL5A1-AS1Q5SY13 56 aa7.3□□□□□ -1.24
SF3B2-215ENST00000534307 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
SF3B2-215ENST00000534307 RBM3P98179 157 aaKnown RBP7.29□□□□□ -1.24
SF3B2-215ENST00000534307 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
SF3B2-215ENST00000534307 A0A1B0GV72 72 aa7.28□□□□□ -1.24
SF3B2-215ENST00000534307 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
SF3B2-215ENST00000534307 JMJD7-PLA2G4BH0Y9G9 81 aa7.27□□□□□ -1.25
SF3B2-215ENST00000534307 C21orf62-AS1Q17RA5 79 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms